DK952290 |
Clone id |
TST38A01NGRL0013_L04 |
Library |
TST38 |
Length |
589 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_L04. 5' end sequence. |
Accession |
DK952290 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL72Contig2 |
Sequence |
TGTTTTTCGGCATCTTCAGAGTCGACCAAAAGGCTCAGAAGGAAGCGAGTCCAGTGTTTG CAAGACATCTTAATTCTCCTCCTTTGCCACTTAGCTCCATGGATTGCACATTTGCGGCGC AGGCCTCTCCGCAAACAGCTGCGGCTCCCCTAGCAGCCCTCTCACACAAGTCTTCTGTTC AGATCCCGCGGGGGGCTCTCCGCTCAAACTTCTGTGTGCAGACAGGTCTTTTAAAGTTGG ATATTCAGAGAGGGATAAAGTCAAGGTTGAGGAGAAACAGGGGCAGTGTCAAGTTGGCAG TTGTTAGAGCAAGTGGTGATACTCAAGATAGTGGGTCTCCGATAGCTCCGTTCCAGCCAG AGTCTCCTACCGGTCAGTACTTGGCACAGCTTCTTCAAAGCCATCCCCATCTTGTTCCTG CTGCTGTTGAGCAAGAGCTTGAGAAGCTTGCTGAGAATCGTACTTTGCAGGATTCTTCCA CTGAGCCTAGCTCAAAGGGTTCCGAGCTTGTCCTCTAGAGACGGATTGCTGAGCTCAAAG AGCAGGAAAGGCAAAGAGCATTGGAAGAGATAATCTACACCCTCATTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8BI22 |
Definition |
sp|Q8BI22|CN145_MOUSE Uncharacterized protein C14orf145 homolog OS=Mus musculus |
Align length |
126 |
Score (bit) |
33.1 |
E-value |
1.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPW2 |
Definition |
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
108 |
Score (bit) |
114.0 |
E-value |
3.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952290|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_L04, 5' (589 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 114 3e-24 tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 114 3e-24 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 107 6e-22 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 104 3e-21 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 104 3e-21 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 104 3e-21 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 103 5e-21 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 103 5e-21 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 103 5e-21 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 97 5e-19 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 96 1e-18 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 95 3e-18 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 94 6e-18 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 93 1e-17 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 93 1e-17 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 93 1e-17 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 93 1e-17 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 91 4e-17 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 87 7e-16 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 86 2e-15 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 86 2e-15 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 86 2e-15 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 85 3e-15 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 83 1e-14 tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia ... 82 2e-14 tr|A5BZ18|A5BZ18_VITVI Putative uncharacterized protein OS=Vitis... 73 1e-11 tr|A4S3L6|A4S3L6_OSTLU Predicted protein OS=Ostreococcus lucimar... 66 1e-09 tr|B6TD75|B6TD75_MAIZE Putative uncharacterized protein OS=Zea m... 65 2e-09 tr|Q2R4Y4|Q2R4Y4_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 64 8e-09 tr|Q2R4Y3|Q2R4Y3_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 64 8e-09
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 114 bits (286), Expect = 3e-24 Identities = 62/108 (57%), Positives = 77/108 (71%) Frame = +3
Query: 264 RLRRNRGSVKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELE 443 R RRN G VRA+G+ +S PIAP Q ESPTGQ+L+QLL+ HPHL+PAAVEQ+LE Sbjct: 74 RSRRNFG------VRAAGNYDESSKPIAPLQLESPTGQFLSQLLKDHPHLLPAAVEQQLE 127
Query: 444 KLAENRTLQDSSTEPSSKGSELVL*RRIAELKEQERQRALEEIIYTLI 587 +L +R PSS +ELVL RRIAE+K ER++ALEEI+Y LI Sbjct: 128 RLVADRDAAAQQDPPSSTSTELVLYRRIAEVKAAERRKALEEIMYALI 175
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 114 bits (286), Expect = 3e-24 Identities = 60/104 (57%), Positives = 76/104 (73%), Gaps = 2/104 (1%) Frame = +3
Query: 282 GSVKLAVVRASGDTQDSGS--PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAE 455 G K +VRAS SGS PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 4 GCKKCTIVRASASADSSGSAAPIAPLQLESPIGQFLSQILISHPHLVPAAVEQQLEQLQT 63
Query: 456 NRTLQDSSTEPSSKGSELVL*RRIAELKEQERQRALEEIIYTLI 587 +R ++ E S+ G+ELVL RRIAE+K ER++ALEEI+Y L+ Sbjct: 64 DRDAEEHKEESSASGTELVLYRRIAEVKANERKKALEEILYALV 107
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 107 bits (266), Expect = 6e-22 Identities = 56/106 (52%), Positives = 74/106 (69%), Gaps = 4/106 (3%) Frame = +3
Query: 282 GSVKLAVVRASGDTQDSGS----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKL 449 GS + VRAS + S PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 59 GSRRCMAVRASSSSSSDSSGSIVPIAPLQLESPIGQFLSQILVSHPHLVPAAVEQQLEQL 118
Query: 450 AENRTLQDSSTEPSSKGSELVL*RRIAELKEQERQRALEEIIYTLI 587 +R + +PS+ G++LVL RRIAE K +R++ALEEI+Y L+ Sbjct: 119 QTDRDSEKQKEDPSATGTDLVLYRRIAEAKANDRRKALEEILYALV 164
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 104 bits (260), Expect = 3e-21 Identities = 57/102 (55%), Positives = 75/102 (73%), Gaps = 6/102 (5%) Frame = +3
Query: 300 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 464 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 465 LQDSSTEPSS-KGSELVL*RRIAELKEQERQRALEEIIYTLI 587 Q + + +S G+++VL RRIAELKE ER+R LEEI+Y L+ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALV 174
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 104 bits (260), Expect = 3e-21 Identities = 57/102 (55%), Positives = 75/102 (73%), Gaps = 6/102 (5%) Frame = +3
Query: 300 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 464 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 465 LQDSSTEPSS-KGSELVL*RRIAELKEQERQRALEEIIYTLI 587 Q + + +S G+++VL RRIAELKE ER+R LEEI+Y L+ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALV 174
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 104 bits (260), Expect = 3e-21 Identities = 57/102 (55%), Positives = 75/102 (73%), Gaps = 6/102 (5%) Frame = +3
Query: 300 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 464 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 465 LQDSSTEPSS-KGSELVL*RRIAELKEQERQRALEEIIYTLI 587 Q + + +S G+++VL RRIAELKE ER+R LEEI+Y L+ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALV 174
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 103 bits (258), Expect = 5e-21 Identities = 55/97 (56%), Positives = 74/97 (76%), Gaps = 1/97 (1%) Frame = +3
Query: 300 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 479 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 480 TEPSS-KGSELVL*RRIAELKEQERQRALEEIIYTLI 587 + SS G+++VL RRIAE+KE+ER+RALEEI+Y L+ Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRALEEILYALV 165
>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1 Length = 342
Score = 103 bits (258), Expect = 5e-21 Identities = 55/97 (56%), Positives = 74/97 (76%), Gaps = 1/97 (1%) Frame = +3
Query: 300 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 479 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 480 TEPSS-KGSELVL*RRIAELKEQERQRALEEIIYTLI 587 + SS G+++VL RRIAE+KE+ER+RALEEI+Y L+ Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRALEEILYALV 165
>tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 401
Score = 103 bits (258), Expect = 5e-21 Identities = 52/97 (53%), Positives = 72/97 (74%) Frame = +3
Query: 297 AVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDS 476 A + +S D+ S + IAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R + Sbjct: 68 ASLSSSSDSSGSIASIAPLQLESPVGQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEKQ 127
Query: 477 STEPSSKGSELVL*RRIAELKEQERQRALEEIIYTLI 587 EPS+ ++LVL R+IAE+K ER++ALEEI+Y L+ Sbjct: 128 KEEPSATSTDLVLYRKIAEVKANERRKALEEILYALV 164
>tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022976001 PE=4 SV=1 Length = 342
Score = 97.4 bits (241), Expect = 5e-19 Identities = 50/100 (50%), Positives = 72/100 (72%), Gaps = 4/100 (4%) Frame = +3
Query: 300 VVRASG----DTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTL 467 +VRAS D+ +S +PIAP + ESP G++L ++L SHPHLVPAAVE++LE+ +R Sbjct: 10 MVRASATVDNDSYESAAPIAPLRLESPIGRFLTEILISHPHLVPAAVERQLEQFQTDRDA 69
Query: 468 QDSSTEPSSKGSELVL*RRIAELKEQERQRALEEIIYTLI 587 + E S+ G EL+L RRIA++K ER++ALEEI+Y L+ Sbjct: 70 EGHKQESSASGIELLLYRRIAKVKANERKKALEEILYVLV 109
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