| DK952294 |
| Clone id |
TST38A01NGRL0013_L08 |
| Library |
TST38 |
| Length |
572 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_L08. 5' end sequence. |
| Accession |
DK952294 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL3079Contig1 |
| Sequence |
CTGAGATTATACCTGGAGTGCTGTTTATAGATGAAGTGCATATGCTAGACATTGAGTGCT TCTCTTTTCTGAATCGTGCTCTTGAGAATGAAATGGCACCTATTCTGGTCGTTGCTACAA ATAGGGGCATCACAAGGATTCGTGGAACAAACTACAGGGGCCCTCACGGGATGCCTATTG ATCTTTTAGACAGGCTGCTTATAATATCCACACAACCCTACACTGAGGATGAAATTCGTC AAATTTTGGAAATTAGGTGCGAAGAGGAGGATGTTGAAATGTCAGAAGATGCAAAGTTGC TTCTGACAAAGATAGGGCACGAAACGTCACTCCGCTATGCCATTCACTTGATCACGGCTG CTGCACTAGCATGCCAGAAGCGGAAAGGCAAGGAGGTAGATATACAAGATGTGAGCAGGG TTTATGAGCTTTTCATGGATGTGAAAAGGTCGACTCAATTCTTGATGGATTATCAGGATC AGTTTATGTTCAATGAAATTCCAGAAGCCAATGGTAGTGCAGCCATGGCAGAATGATGGG CTAAGGCAAAGACCATTCANGTCCACTTGTGT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9DE27 |
| Definition |
sp|Q9DE27|RUVB2_XENLA RuvB-like 2 OS=Xenopus laevis |
| Align length |
166 |
| Score (bit) |
261.0 |
| E-value |
2.0e-69 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A5B5X9 |
| Definition |
tr|A5B5X9|A5B5X9_VITVI Putative uncharacterized protein OS=Vitis vinifera |
| Align length |
171 |
| Score (bit) |
296.0 |
| E-value |
4.0e-79 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952294|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_L08, 5' (572 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5B5X9|A5B5X9_VITVI Putative uncharacterized protein OS=Vitis... 296 4e-79 tr|A9U0H5|A9U0H5_PHYPA DNA helicase, TBP-interacting protein OS=... 295 9e-79 tr|B8LQ05|B8LQ05_PICSI Putative uncharacterized protein OS=Picea... 294 3e-78 tr|Q5SMU8|Q5SMU8_ORYSJ cDNA clone:001-113-D06, full insert seque... 292 8e-78 tr|Q0DDZ6|Q0DDZ6_ORYSJ Os06g0186900 protein (Fragment) OS=Oryza ... 292 8e-78 tr|B8B3R2|B8B3R2_ORYSI Putative uncharacterized protein OS=Oryza... 291 1e-77 tr|B6TN62|B6TN62_MAIZE RuvB-like 2 OS=Zea mays PE=2 SV=1 291 2e-77 tr|B7ZXC9|B7ZXC9_MAIZE Putative uncharacterized protein OS=Zea m... 286 4e-76 tr|B6T4M0|B6T4M0_MAIZE RuvB-like 2 OS=Zea mays PE=2 SV=1 286 4e-76 tr|A9TL22|A9TL22_PHYPA DNA helicase, TBP-interacting protein OS=... 286 4e-76 tr|A8II71|A8II71_CHLRE Predicted protein OS=Chlamydomonas reinha... 285 2e-75 tr|Q9FJW0|Q9FJW0_ARATH RuvB DNA helicase-like protein (AT5g67630... 274 2e-72 tr|B6NLP8|B6NLP8_BRAFL Putative uncharacterized protein OS=Branc... 266 5e-70 tr|Q0IH85|Q0IH85_XENLA LOC398205 protein OS=Xenopus laevis GN=ru... 261 3e-68 tr|Q801R1|Q801R1_XENLA Ruvbl2-prov protein OS=Xenopus laevis PE=... 260 3e-68 tr|Q5DCR4|Q5DCR4_SCHJA SJCHGC06270 protein OS=Schistosoma japoni... 260 3e-68 tr|Q6GL37|Q6GL37_XENTR RuvB-like 2 OS=Xenopus tropicalis GN=ruvb... 259 6e-68 tr|Q28GB7|Q28GB7_XENTR RuvB-like 2 OS=Xenopus tropicalis GN=ruvb... 259 6e-68 tr|B6N9K0|B6N9K0_BRAFL Putative uncharacterized protein OS=Branc... 259 6e-68 tr|B8BXV8|B8BXV8_THAPS Ruvb-like protein OS=Thalassiosira pseudo... 258 2e-67 tr|Q4QQS4|Q4QQS4_RAT RuvB-like protein 2 OS=Rattus norvegicus GN... 256 6e-67 tr|Q3UXP2|Q3UXP2_MOUSE Putative uncharacterized protein OS=Mus m... 256 6e-67 tr|Q3TXT7|Q3TXT7_MOUSE Putative uncharacterized protein OS=Mus m... 256 6e-67 tr|A6MK39|A6MK39_CALJA RuvB-like 2-like protein (Fragment) OS=Ca... 256 8e-67 tr|B3KQ59|B3KQ59_HUMAN cDNA FLJ32936 fis, clone TESTI2007533, hi... 256 8e-67 tr|B3KNL2|B3KNL2_HUMAN cDNA FLJ14856 fis, clone PLACE1001054, hi... 256 8e-67 tr|Q4SLD9|Q4SLD9_TETNG Chromosome 7 SCAF14557, whole genome shot... 255 1e-66 tr|Q9M2X5|Q9M2X5_ARATH RuvB DNA helicase-like protein OS=Arabido... 255 1e-66 tr|B0S5N1|B0S5N1_DANRE RuvB-like 2 (E. coli) OS=Danio rerio GN=r... 254 2e-66 tr|B7QNJ1|B7QNJ1_IXOSC Putative uncharacterized protein OS=Ixode... 254 2e-66
>tr|A5B5X9|A5B5X9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015453 PE=4 SV=1 Length = 467
Score = 296 bits (759), Expect = 4e-79 Identities = 142/171 (83%), Positives = 164/171 (95%) Frame = +3
Query: 3 EIIPGVLFIDEVHMLDIECFSFLNRALENEMAPILVVATNRGITRIRGTNYRGPHGMPID 182 EI+PGVLFIDEVHMLDIECFSFLNRALENEM+PILVVATNRGIT IRGTNY+ PHG+PID Sbjct: 287 EIVPGVLFIDEVHMLDIECFSFLNRALENEMSPILVVATNRGITTIRGTNYKSPHGIPID 346
Query: 183 LLDRLLIISTQPYTEDEIRQILEIRCEEEDVEMSEDAKLLLTKIGHETSLRYAIHLITAA 362 LLDRLLIISTQPY+EDEIR+IL+IRC+EEDV+MSE+AK+LLTKIG ETSLRYAIHLITAA Sbjct: 347 LLDRLLIISTQPYSEDEIRKILDIRCQEEDVDMSEEAKVLLTKIGVETSLRYAIHLITAA 406
Query: 363 ALACQKRKGKEVDIQDVSRVYELFMDVKRSTQFLMDYQDQFMFNEIPEANG 515 ALACQKRKGK V+++D+SRVY+LF+DVKRSTQ+LM+YQ+Q+MFNE+P G Sbjct: 407 ALACQKRKGKVVEMEDISRVYQLFLDVKRSTQYLMEYQNQYMFNEVPAGEG 457
>tr|A9U0H5|A9U0H5_PHYPA DNA helicase, TBP-interacting protein OS=Physcomitrella patens subsp. patens GN=RUVBL1502 PE=4 SV=1 Length = 463
Score = 295 bits (756), Expect = 9e-79 Identities = 143/166 (86%), Positives = 161/166 (96%) Frame = +3
Query: 3 EIIPGVLFIDEVHMLDIECFSFLNRALENEMAPILVVATNRGITRIRGTNYRGPHGMPID 182 EIIPGVLFIDEVHMLDIECFS+LNRALENEMAPILVVATNRGITRIRGTNY+ PHG+PID Sbjct: 288 EIIPGVLFIDEVHMLDIECFSWLNRALENEMAPILVVATNRGITRIRGTNYKSPHGIPID 347
Query: 183 LLDRLLIISTQPYTEDEIRQILEIRCEEEDVEMSEDAKLLLTKIGHETSLRYAIHLITAA 362 LLDRLLIIST PYTE+E+R+IL+IRCEEEDVEMSEDA+ LLTKIGHETSLRYAIHLI AA Sbjct: 348 LLDRLLIISTSPYTEEELRKILDIRCEEEDVEMSEDARDLLTKIGHETSLRYAIHLINAA 407
Query: 363 ALACQKRKGKEVDIQDVSRVYELFMDVKRSTQFLMDYQDQFMFNEI 500 +L+CQ+RKGKEV+I+D+SRVY LF+DVKRSTQFLM+YQ+QFMFNE+ Sbjct: 408 SLSCQRRKGKEVEIEDISRVYSLFVDVKRSTQFLMEYQEQFMFNEM 453
>tr|B8LQ05|B8LQ05_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 463
Score = 294 bits (752), Expect = 3e-78 Identities = 143/167 (85%), Positives = 160/167 (95%) Frame = +3
Query: 3 EIIPGVLFIDEVHMLDIECFSFLNRALENEMAPILVVATNRGITRIRGTNYRGPHGMPID 182 EI+PGVLFIDEVHMLDIECFSFLNRALEN+MAPILVVATNRGIT+IRGTNY+ PHG+PID Sbjct: 287 EIVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVVATNRGITKIRGTNYKSPHGIPID 346
Query: 183 LLDRLLIISTQPYTEDEIRQILEIRCEEEDVEMSEDAKLLLTKIGHETSLRYAIHLITAA 362 LLDRLLIISTQPYTEDE+RQIL+IRCEEEDV MS++AK LLTKIG ETSLRYAIHLITAA Sbjct: 347 LLDRLLIISTQPYTEDEMRQILDIRCEEEDVGMSDEAKELLTKIGFETSLRYAIHLITAA 406
Query: 363 ALACQKRKGKEVDIQDVSRVYELFMDVKRSTQFLMDYQDQFMFNEIP 503 ALACQKRKGK V+I DVSR Y+LF+D+KRSTQFL++YQ+QFMFNE+P Sbjct: 407 ALACQKRKGKLVEIVDVSRAYQLFVDIKRSTQFLIEYQEQFMFNEVP 453
>tr|Q5SMU8|Q5SMU8_ORYSJ cDNA clone:001-113-D06, full insert sequence OS=Oryza sativa subsp. japonica GN=P0470C02.10 PE=2 SV=1 Length = 476
Score = 292 bits (748), Expect = 8e-78 Identities = 141/175 (80%), Positives = 162/175 (92%) Frame = +3
Query: 3 EIIPGVLFIDEVHMLDIECFSFLNRALENEMAPILVVATNRGITRIRGTNYRGPHGMPID 182 EI+PGVLFIDEVHMLDIECFSFLNRALEN+MAPILV+ATNRGIT IRGTNYR PHG+P D Sbjct: 300 EIVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVIATNRGITSIRGTNYRSPHGIPPD 359
Query: 183 LLDRLLIISTQPYTEDEIRQILEIRCEEEDVEMSEDAKLLLTKIGHETSLRYAIHLITAA 362 LDRLLII+TQPYTED+IR+IL+IRC+EEDVEMS DAK+LLTKIG ETSLRYAIHLIT+A Sbjct: 360 FLDRLLIITTQPYTEDDIRKILDIRCDEEDVEMSADAKVLLTKIGVETSLRYAIHLITSA 419
Query: 363 ALACQKRKGKEVDIQDVSRVYELFMDVKRSTQFLMDYQDQFMFNEIPEANGSAAM 527 ALACQKRKGK V+++D+SRVY+LF+DVKRSTQ+LM+YQ Q+MFNE+P G AM Sbjct: 420 ALACQKRKGKVVEMEDISRVYQLFLDVKRSTQYLMEYQSQYMFNEVPGEAGDDAM 474
>tr|Q0DDZ6|Q0DDZ6_ORYSJ Os06g0186900 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0186900 PE=4 SV=1 Length = 499
Score = 292 bits (748), Expect = 8e-78 Identities = 141/175 (80%), Positives = 162/175 (92%) Frame = +3
Query: 3 EIIPGVLFIDEVHMLDIECFSFLNRALENEMAPILVVATNRGITRIRGTNYRGPHGMPID 182 EI+PGVLFIDEVHMLDIECFSFLNRALEN+MAPILV+ATNRGIT IRGTNYR PHG+P D Sbjct: 323 EIVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVIATNRGITSIRGTNYRSPHGIPPD 382
Query: 183 LLDRLLIISTQPYTEDEIRQILEIRCEEEDVEMSEDAKLLLTKIGHETSLRYAIHLITAA 362 LDRLLII+TQPYTED+IR+IL+IRC+EEDVEMS DAK+LLTKIG ETSLRYAIHLIT+A Sbjct: 383 FLDRLLIITTQPYTEDDIRKILDIRCDEEDVEMSADAKVLLTKIGVETSLRYAIHLITSA 442
Query: 363 ALACQKRKGKEVDIQDVSRVYELFMDVKRSTQFLMDYQDQFMFNEIPEANGSAAM 527 ALACQKRKGK V+++D+SRVY+LF+DVKRSTQ+LM+YQ Q+MFNE+P G AM Sbjct: 443 ALACQKRKGKVVEMEDISRVYQLFLDVKRSTQYLMEYQSQYMFNEVPGEAGDDAM 497
>tr|B8B3R2|B8B3R2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21954 PE=4 SV=1 Length = 460
Score = 291 bits (746), Expect = 1e-77 Identities = 142/176 (80%), Positives = 163/176 (92%), Gaps = 1/176 (0%) Frame = +3
Query: 3 EIIPGVLFIDEVHMLDIECFSFLNRALENEMAPILVVATNRGITRIRGTNYRGPHGMPID 182 EI+PGVLFIDEVHMLDIECFSFLNRALEN+MAPILV+ATNRGIT IRGTNYR PHG+P D Sbjct: 283 EIVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVIATNRGITSIRGTNYRSPHGIPPD 342
Query: 183 LLDRLLIISTQPYTEDEIRQILEIRCEEEDVEMSEDAKLLLTKIGHETSLRYAIHLITAA 362 LDRLLII+TQPYTED+IR+IL+IRC+EEDVEMS DAK+LLTKIG ETSLRYAIHLIT+A Sbjct: 343 FLDRLLIITTQPYTEDDIRKILDIRCDEEDVEMSADAKVLLTKIGVETSLRYAIHLITSA 402
Query: 363 ALACQKRKGKEVDIQDVSRVYELFMDVKRSTQFLMDYQDQFMFNEIP-EANGSAAM 527 ALACQKRKGK V+++D+SRVY+LF+DVKRSTQ+LM+YQ Q+MFNE+P E G AM Sbjct: 403 ALACQKRKGKVVEMEDISRVYQLFLDVKRSTQYLMEYQSQYMFNEVPGETEGDDAM 458
>tr|B6TN62|B6TN62_MAIZE RuvB-like 2 OS=Zea mays PE=2 SV=1 Length = 478
Score = 291 bits (745), Expect = 2e-77 Identities = 142/176 (80%), Positives = 165/176 (93%), Gaps = 1/176 (0%) Frame = +3
Query: 3 EIIPGVLFIDEVHMLDIECFSFLNRALENEMAPILVVATNRGITRIRGTNYRGPHGMPID 182 +I+PGVLFIDEVHMLDIECFSFLNRALEN+MAPILV+ATNRGIT IRGTNYR PHG+P D Sbjct: 301 DIVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVIATNRGITSIRGTNYRSPHGIPPD 360
Query: 183 LLDRLLIISTQPYTEDEIRQILEIRCEEEDVEMSEDAKLLLTKIGHETSLRYAIHLITAA 362 LDRLLII+TQPYTEDEIR+IL+IRC+EEDVEMS DAK+LLTKIG ETSLRYAI+LIT+A Sbjct: 361 FLDRLLIITTQPYTEDEIRKILDIRCDEEDVEMSADAKVLLTKIGVETSLRYAINLITSA 420
Query: 363 ALACQKRKGKEVDIQDVSRVYELFMDVKRSTQFLMDYQDQFMFNEIP-EANGSAAM 527 ALACQ+RKGK VD++D+SRVY+LF+DVKRSTQ+LM+YQ Q+MFNE+P EA+G AM Sbjct: 421 ALACQRRKGKVVDMEDISRVYQLFLDVKRSTQYLMEYQSQYMFNEVPGEADGEDAM 476
>tr|B7ZXC9|B7ZXC9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 478
Score = 286 bits (733), Expect = 4e-76 Identities = 139/176 (78%), Positives = 164/176 (93%), Gaps = 1/176 (0%) Frame = +3
Query: 3 EIIPGVLFIDEVHMLDIECFSFLNRALENEMAPILVVATNRGITRIRGTNYRGPHGMPID 182 +I+PGVLFIDEVHMLDIECFSFLNRALEN+MAPILV+ATNRGIT IRGTNYR PHG+P D Sbjct: 301 DIVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVIATNRGITSIRGTNYRSPHGIPPD 360
Query: 183 LLDRLLIISTQPYTEDEIRQILEIRCEEEDVEMSEDAKLLLTKIGHETSLRYAIHLITAA 362 LDRLLII+T PYTEDEIR+IL+IRC+EEDVEMS DAK+LLTKIG ETSLRYAI+LIT+A Sbjct: 361 FLDRLLIITTHPYTEDEIRKILDIRCDEEDVEMSADAKVLLTKIGVETSLRYAINLITSA 420
Query: 363 ALACQKRKGKEVDIQDVSRVYELFMDVKRSTQFLMDYQDQFMFNEIP-EANGSAAM 527 ALACQ+RKGK V+++D+SRVY+LF+DVKRSTQ+LM+YQ Q+MFNE+P +A+G AM Sbjct: 421 ALACQRRKGKVVEMEDISRVYQLFLDVKRSTQYLMEYQSQYMFNEVPGQADGEDAM 476
>tr|B6T4M0|B6T4M0_MAIZE RuvB-like 2 OS=Zea mays PE=2 SV=1 Length = 478
Score = 286 bits (733), Expect = 4e-76 Identities = 139/176 (78%), Positives = 164/176 (93%), Gaps = 1/176 (0%) Frame = +3
Query: 3 EIIPGVLFIDEVHMLDIECFSFLNRALENEMAPILVVATNRGITRIRGTNYRGPHGMPID 182 +I+PGVLFIDEVHMLDIECFSFLNRALEN+MAPILV+ATNRGIT IRGTNYR PHG+P D Sbjct: 301 DIVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVIATNRGITSIRGTNYRSPHGIPPD 360
Query: 183 LLDRLLIISTQPYTEDEIRQILEIRCEEEDVEMSEDAKLLLTKIGHETSLRYAIHLITAA 362 LDRLLII+T PYTEDEIR+IL+IRC+EEDVEMS DAK+LLTKIG ETSLRYAI+LIT+A Sbjct: 361 FLDRLLIITTHPYTEDEIRKILDIRCDEEDVEMSADAKVLLTKIGVETSLRYAINLITSA 420
Query: 363 ALACQKRKGKEVDIQDVSRVYELFMDVKRSTQFLMDYQDQFMFNEIP-EANGSAAM 527 ALACQ+RKGK V+++D+SRVY+LF+DVKRSTQ+LM+YQ Q+MFNE+P +A+G AM Sbjct: 421 ALACQRRKGKVVEMEDISRVYQLFLDVKRSTQYLMEYQSQYMFNEVPGQADGEDAM 476
>tr|A9TL22|A9TL22_PHYPA DNA helicase, TBP-interacting protein OS=Physcomitrella patens subsp. patens GN=RUVBL1503 PE=4 SV=1 Length = 468
Score = 286 bits (733), Expect = 4e-76 Identities = 137/167 (82%), Positives = 159/167 (95%) Frame = +3
Query: 3 EIIPGVLFIDEVHMLDIECFSFLNRALENEMAPILVVATNRGITRIRGTNYRGPHGMPID 182 E++PGVLFIDEVHMLD+ECFSFLNRALENEMAPILVVATNRGITRIRGTNY+ PHG+PID Sbjct: 288 EVVPGVLFIDEVHMLDMECFSFLNRALENEMAPILVVATNRGITRIRGTNYKSPHGIPID 347
Query: 183 LLDRLLIISTQPYTEDEIRQILEIRCEEEDVEMSEDAKLLLTKIGHETSLRYAIHLITAA 362 LLDRLLIIST PYTE+E+R IL+IRC+EEDVEMS+DAK LLTKI ETSLRYA+ LITA+ Sbjct: 348 LLDRLLIISTTPYTEEELRSILDIRCQEEDVEMSDDAKELLTKIAKETSLRYAMCLITAS 407
Query: 363 ALACQKRKGKEVDIQDVSRVYELFMDVKRSTQFLMDYQDQFMFNEIP 503 +LACQKRKGKEV+I+D++RVY+LF+DVKRSTQ+LM+YQ+QFMFNE P Sbjct: 408 SLACQKRKGKEVEIEDITRVYQLFVDVKRSTQYLMEYQEQFMFNEFP 454
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