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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952297
Clone id TST38A01NGRL0013_L11
Library
Length 664
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_L11. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
ACATTTGGCAGCTGATGAGAGTAAGACGAAGAAACGGAAGAAGAGGGCTGACGACGAAGA
TGCGGGCATTGTGAACATCTTCAAGCCCACTCAAGAGCTGGTCACAGCAGAGTCCCAAGC
AGATGAAAAGCAACAACAGAGGCGTGAAGCTGCGAGGGACGAGGAATCTGCATGTGTGCT
AAGGAAGAAGTTCCGGGTTCATGTATCGTGTCACAATGTCCCTGCTCCTCTGTCCAGCTT
TCAAGATCTAGGGTCAGTTTATGGTTGTCAGTCATACCTTATGAGAAATTTAGGCCTAGC
AGGATTCTTAGAGCCTACTCCCGTTCAGCGGCAAGCCATCCCTGCCCTGCTGTCGGGCCA
GGAGTGCTTCGCTTGTGCACCCACAGGGTCAGGGAAGACGTTGGCATTTGCCCTTCCTAT
CCTTATGATGCTTGCTGCTCCCAAGAAAAATGGCATCCGTGCTGTGATTTTGTGTCCAAC
TCGCCAACTTGCCAAACAGATAACCATGGAATGCAAGAGCTTGGCTAAGGGAAGAAAGTT
CCGGATAAGATTGATGACCAAGCCCTTGTCACGATGTGCAGATTTCAGAACTCTTCCATG
CGATGTGTTGGTATCAACACCTCTTAGATTGGACTATGTCATTAACCAAATCCAGGATTG
ATCT
■■Homology search results ■■ -
sp_hit_id Q5K5B6
Definition sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=Oryza sativa subsp. japonica
Align length 186
Score (bit) 231.0
E-value 2.0e-60
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952297|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_L11, 5'
         (664 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=O...   231   2e-60
sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57 OS=A...   200   6e-51
sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 ...   139   1e-32
sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52 ...   137   5e-32
sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52 ...   135   2e-31
sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52 ...   133   7e-31
sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS...   133   1e-30
sp|Q6BP45|ROK1_DEBHA ATP-dependent RNA helicase ROK1 OS=Debaryom...   127   4e-29
sp|A7TT88|ROK1_VANPO ATP-dependent RNA helicase ROK1 OS=Vanderwa...   125   3e-28
sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1 OS=Kluyvero...   124   6e-28
sp|A3GHW9|ROK1_PICST ATP-dependent RNA helicase ROK1 OS=Pichia s...   120   8e-27
sp|Q6FN65|ROK1_CANGA ATP-dependent RNA helicase ROK1 OS=Candida ...   119   1e-26
sp|A5E1N2|ROK1_LODEL ATP-dependent RNA helicase ROK1 OS=Lodderom...   119   1e-26
sp|P45818|ROK1_YEAST ATP-dependent RNA helicase ROK1 OS=Saccharo...   116   1e-25
sp|A6ZU15|ROK1_YEAS7 ATP-dependent RNA helicase ROK1 OS=Saccharo...   115   2e-25
sp|A5DIX5|ROK1_PICGU ATP-dependent RNA helicase ROK1 OS=Pichia g...   114   5e-25
sp|Q75AE1|ROK1_ASHGO ATP-dependent RNA helicase ROK1 OS=Ashbya g...   114   5e-25
sp|Q9Y7C4|ROK1_CANAL ATP-dependent RNA helicase CHR1 OS=Candida ...   112   1e-24
sp|Q6CDS6|ROK1_YARLI ATP-dependent RNA helicase ROK1 OS=Yarrowia...   112   2e-24
sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=O...    95   4e-19
sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS...    90   9e-18
sp|A1CNK1|ROK1_ASPCL ATP-dependent RNA helicase rok1 OS=Aspergil...    89   3e-17
sp|A2QAB5|ROK1_ASPNC ATP-dependent RNA helicase rok1 OS=Aspergil...    88   5e-17
sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=A...    88   5e-17
sp|P46942|DB10_NICSY ATP-dependent RNA helicase-like protein DB1...    87   8e-17
sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=O...    87   1e-16
sp|A7E449|DBP2_SCLS1 ATP-dependent RNA helicase dbp2 OS=Scleroti...    86   2e-16
sp|P24782|DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS=Schizosa...    86   2e-16
sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida ...    86   2e-16
sp|A6SFW7|DBP2_BOTFB ATP-dependent RNA helicase dbp2 OS=Botryoti...    86   2e-16

>sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57
           OS=Oryza sativa subsp. japonica GN=Os07g0647900 PE=2
           SV=2
          Length = 540

 Score =  231 bits (590), Expect = 2e-60
 Identities = 110/186 (59%), Positives = 142/186 (76%)
 Frame = +2

Query: 92  QELVTAESQADEKQQQRREAARDEESACVLRKKFRVHVSCHNVPAPLSSFQDLGSVYGCQ 271
           +++ T +S+  E  ++R+E  R+ E A +LRKKF +H+S  NVPAPL +F++L S YGC 
Sbjct: 95  KKVETGKSEDSEVVRRRKEVEREIERAAILRKKFDIHISGQNVPAPLENFEELVSRYGCD 154

Query: 272 SYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPILMMLAAPKKN 451
           SYL+ NL   GF EPTP+QRQAIP LLSG+ECFACAPTGSGKTLAF  PILM +    K 
Sbjct: 155 SYLVGNLSKLGFQEPTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKE 214

Query: 452 GIRAVILCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADFRTLPCDVLVSTPLRL 631
           G++AVILCPTR+LA Q T ECK LAKGRKF I+LMTK LS+  +F+ + CD+L+STPLRL
Sbjct: 215 GVKAVILCPTRELAAQTTRECKKLAKGRKFYIKLMTKDLSKSGNFKDMHCDILISTPLRL 274

Query: 632 DYVINQ 649
           D+ + +
Sbjct: 275 DHAVQK 280


>sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57
           OS=Arabidopsis thaliana GN=RH57 PE=2 SV=1
          Length = 541

 Score =  200 bits (508), Expect = 6e-51
 Identities = 103/197 (52%), Positives = 134/197 (68%), Gaps = 7/197 (3%)
 Frame = +2

Query: 74  NIFKPTQELVTAESQADEK-------QQQRREAARDEESACVLRKKFRVHVSCHNVPAPL 232
           ++FK +++   A+ +A+E+       +  ++E  R  E   + RK++ +HVS +N+P PL
Sbjct: 78  DVFKSSKK-ARAKGKAEEQITKNEIVENPKKELNRQMERDALSRKQYSIHVSGNNIPPPL 136

Query: 233 SSFQDLGSVYGCQSYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFA 412
            SF +L S YGC+ Y++RNL   GF EPTP+QRQAIP LLSG+ECFACAPTGSGKT AF 
Sbjct: 137 KSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFI 196

Query: 413 LPILMMLAAPKKNGIRAVILCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADFRT 592
            P+L+ L  P  +GIRAVIL P R+LA Q   E K L KG  F IRLMTKPL + ADF  
Sbjct: 197 CPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADFSK 256

Query: 593 LPCDVLVSTPLRLDYVI 643
           L CDVL+STP+RL   I
Sbjct: 257 LWCDVLISTPMRLKRAI 273


>sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52
           OS=Homo sapiens GN=DDX52 PE=1 SV=2
          Length = 599

 Score =  139 bits (350), Expect = 1e-32
 Identities = 79/196 (40%), Positives = 115/196 (58%), Gaps = 10/196 (5%)
 Frame = +2

Query: 92  QELVTAESQADEKQQQRREAARD-------EESACVLRKKFRVHVSCHNVPAPLSSFQDL 250
           Q + + E++ ++K+ QR             +E    LR K ++HV   ++P P+++FQ L
Sbjct: 107 QWMSSVEAKIEDKKVQRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQL 166

Query: 251 GSVYGCQSYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPILMM 430
              Y   S L++N+  AGF  PTP+Q QAIP +L G+E  A APTGSGKTLAF++PILM 
Sbjct: 167 DQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQ 226

Query: 431 LAAPKKNGIRAVILCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADF---RTLPC 601
           L  P   G RA+I+ PTR+LA QI  E   +++G  FRI ++ K       F    +   
Sbjct: 227 LKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKF 286

Query: 602 DVLVSTPLRLDYVINQ 649
           D+LV+TP RL Y++ Q
Sbjct: 287 DILVTTPNRLIYLLKQ 302


>sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52
           OS=Bos taurus GN=DDX52 PE=2 SV=1
          Length = 596

 Score =  137 bits (345), Expect = 5e-32
 Identities = 78/196 (39%), Positives = 114/196 (58%), Gaps = 10/196 (5%)
 Frame = +2

Query: 92  QELVTAESQADEKQQQRREAARD-------EESACVLRKKFRVHVSCHNVPAPLSSFQDL 250
           Q + + E++ ++K  +R+            +E     R K ++HV   ++P P+++FQ L
Sbjct: 105 QWISSVEAKIEDKNVKRKNKLTSGKLEQLRKEKLNFFRNKHKIHVQGTDLPDPIATFQQL 164

Query: 251 GSVYGCQSYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPILMM 430
              Y   S L++N+  AGF  PTP+Q QAIP +L G+E  A APTGSGKTLAF++PILM 
Sbjct: 165 DQEYKINSRLLQNILDAGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMH 224

Query: 431 LAAPKKNGIRAVILCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADF---RTLPC 601
           L  P   G RA+I+ PTR+LA QI  E   L++G  FRI ++ K       F    +   
Sbjct: 225 LKQPTNKGFRALIISPTRELASQIHRELVKLSEGTGFRIHMIHKAAVAAKKFGPKSSKKF 284

Query: 602 DVLVSTPLRLDYVINQ 649
           D+LV+TP RL Y++ Q
Sbjct: 285 DILVTTPNRLIYLLKQ 300


>sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52
           OS=Mus musculus GN=Ddx52 PE=2 SV=1
          Length = 598

 Score =  135 bits (340), Expect = 2e-31
 Identities = 72/166 (43%), Positives = 102/166 (61%), Gaps = 3/166 (1%)
 Frame = +2

Query: 161 EESACVLRKKFRVHVSCHNVPAPLSSFQDLGSVYGCQSYLMRNLGLAGFLEPTPVQRQAI 340
           +E     R K ++HV   ++P P+++FQ L   Y   S L++N+  AGF  PTP+Q QAI
Sbjct: 138 KEKVNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQVPTPIQMQAI 197

Query: 341 PALLSGQECFACAPTGSGKTLAFALPILMMLAAPKKNGIRAVILCPTRQLAKQITMECKS 520
           P +L G+E  A APTGSGKTLAF++PILM L  P   G RA+++ PTR+LA QI  E   
Sbjct: 198 PVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIK 257

Query: 521 LAKGRKFRIRLMTKPLSRCADF---RTLPCDVLVSTPLRLDYVINQ 649
           +++G  FRI ++ K       F    +   D+LV+TP RL Y++ Q
Sbjct: 258 ISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQ 303


>sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52
           OS=Dictyostelium discoideum GN=ddx52 PE=3 SV=1
          Length = 668

 Score =  133 bits (335), Expect = 7e-31
 Identities = 69/178 (38%), Positives = 108/178 (60%), Gaps = 2/178 (1%)
 Frame = +2

Query: 122 DEKQQQRREAARDEESACVLRKKFRVHVSCHNVPAPLSSFQDLGSVYGCQSYLMRNLGLA 301
           ++K  +  +  + +      R K R+ V   ++P P++ F  L + +  + YL+ N+   
Sbjct: 158 NKKVSKETQEDKHKREIATFRNKHRIKVDGTDIPDPMTEFSQLENRFKVRKYLLNNINEI 217

Query: 302 GFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPILMMLAAPKKNGIRAVILCPT 481
           G+ EP+P+Q Q IP LL  +E  A APTGSGKT +F++PIL  L  PKK G R+VI+ PT
Sbjct: 218 GYKEPSPIQMQVIPILLKEREVVAIAPTGSGKTASFSIPILQALYEPKKEGFRSVIIAPT 277

Query: 482 RQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADFRTL--PCDVLVSTPLRLDYVINQ 649
           R+LA+QI    + L+KG+ FRI +++K L   +    L    D+L++TPLRL Y+I +
Sbjct: 278 RELAQQIYRNFRLLSKGKPFRICVLSKNLHNQSTNENLIKNYDILITTPLRLVYLIKE 335


>sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52
           OS=Rattus norvegicus GN=Ddx52 PE=2 SV=1
          Length = 598

 Score =  133 bits (334), Expect = 1e-30
 Identities = 71/166 (42%), Positives = 101/166 (60%), Gaps = 3/166 (1%)
 Frame = +2

Query: 161 EESACVLRKKFRVHVSCHNVPAPLSSFQDLGSVYGCQSYLMRNLGLAGFLEPTPVQRQAI 340
           +E     R K ++HV   ++P P+++FQ L   Y     L++N+  AGF  PTP+Q QAI
Sbjct: 138 KEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISPRLLQNILDAGFQVPTPIQMQAI 197

Query: 341 PALLSGQECFACAPTGSGKTLAFALPILMMLAAPKKNGIRAVILCPTRQLAKQITMECKS 520
           P +L G+E  A APTGSGKTLAF++PILM L  P   G RA+++ PTR+LA QI  E   
Sbjct: 198 PVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIK 257

Query: 521 LAKGRKFRIRLMTKPLSRCADF---RTLPCDVLVSTPLRLDYVINQ 649
           +++G  FRI ++ K       F    +   D+LV+TP RL Y++ Q
Sbjct: 258 ISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQ 303


>sp|Q6BP45|ROK1_DEBHA ATP-dependent RNA helicase ROK1
           OS=Debaryomyces hansenii GN=ROK1 PE=3 SV=2
          Length = 550

 Score =  127 bits (320), Expect = 4e-29
 Identities = 74/192 (38%), Positives = 110/192 (57%), Gaps = 16/192 (8%)
 Frame = +2

Query: 104 TAESQADEKQQQRREAARDE---------ESACVLRKKFRVHVSCHNVPAPLSSFQDLGS 256
           T+  + ++K  +  +   DE         + A  LRK  +  VS  ++P P+ SF+DL  
Sbjct: 58  TSHKETEKKNDEGEDEIEDEVPPLTISSDDDARKLRKLNKSKVSGEDIPLPIGSFEDLIG 117

Query: 257 VYGCQSYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPILMMLA 436
            Y     L+ NL  AGF EPTP+Q +AIP  L G++  ACAPTGSGKTLAF +P++  + 
Sbjct: 118 RYKLDKKLLSNLIDAGFTEPTPIQDEAIPISLEGRDLIACAPTGSGKTLAFLIPLVQTIL 177

Query: 437 APKKN----GIRAVILCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADFRTL--- 595
               N    GIR +I+ PT +LA QI  E  ++ KG+K +I +++K L+   + + +   
Sbjct: 178 QSNPNVKNYGIRGLIISPTNELAVQIFQELNTMTKGKKMKIGILSKQLANKINNKIINSS 237

Query: 596 PCDVLVSTPLRL 631
             D+LVSTPLRL
Sbjct: 238 KYDILVSTPLRL 249


>sp|A7TT88|ROK1_VANPO ATP-dependent RNA helicase ROK1
           OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
           70294) GN=ROK1 PE=3 SV=1
          Length = 570

 Score =  125 bits (313), Expect = 3e-28
 Identities = 75/194 (38%), Positives = 115/194 (59%), Gaps = 11/194 (5%)
 Frame = +2

Query: 110 ESQADEKQQQRREAARDEESACVLRKKFRVHVSCHNVPAPLSSFQDLGSVYGCQSYLMRN 289
           E + +E  Q ++    ++E A +LRK  + +VS  ++P P+ SF+DL + +     L+ N
Sbjct: 86  EIKEEESLQYQKPLITNDEEAKLLRKSNKSNVSGEDIPLPIGSFEDLITRFSFDKRLLNN 145

Query: 290 LGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPILMMLAAPK-KNGIRAV 466
           L L  F EPTP+Q +AIP  L+ ++  ACAPTGSGKTLAF +P++  +   K   G++ +
Sbjct: 146 LILNHFTEPTPIQCEAIPLALNNRDMLACAPTGSGKTLAFLIPLIQQVINDKDTQGLKGL 205

Query: 467 ILCPTRQLAKQITMECKSLA------KGRKFRIRLMTKPLS---RCADFRTLPCDVLVST 619
           I+ PT++LA QI +EC  L+      K R  ++ L++K LS   R         D++VST
Sbjct: 206 IISPTKELANQIFLECIKLSNRIFLDKKRPLQVALLSKSLSAKLRNKVISDKKYDIIVST 265

Query: 620 PLRL-DYVINQIQD 658
           PLRL D V N+  D
Sbjct: 266 PLRLIDVVKNEALD 279


>sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1
           OS=Kluyveromyces lactis GN=ROK1 PE=3 SV=1
          Length = 579

 Score =  124 bits (310), Expect = 6e-28
 Identities = 77/215 (35%), Positives = 118/215 (54%), Gaps = 21/215 (9%)
 Frame = +2

Query: 68  IVNIFKPTQELVTAESQADEKQQQRREAARDEES-----------ACVLRKKFRVHVSCH 214
           I+N  K        E +  E  Q+  E   D+E+           A  LRK ++ +VS +
Sbjct: 63  IMNKVKSESTKGEGEDEVQEDNQEEDEDHADDETELSGKIITKQDALKLRKSYQGNVSGN 122

Query: 215 NVPAPLSSFQDLGSVYGCQSYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSG 394
           +VP P+ SF+DL + +     L+ NL    F EPTP+Q ++IP LL  ++  ACAPTGSG
Sbjct: 123 SVPLPIGSFEDLITRFQFDKRLLNNLIENNFTEPTPIQSESIPILLHERDMIACAPTGSG 182

Query: 395 KTLAFALPILMMLAAPKKN-GIRAVILCPTRQLAKQITMECKSLA------KGRKFRIRL 553
           KTLAF +P+L  +   K   G++ +I+ PT++LA QI +EC  LA      K R  ++ L
Sbjct: 183 KTLAFLIPLLQQIINDKTTVGLKGLIISPTKELANQIFIECSKLANKIYLDKKRPLQVAL 242

Query: 554 MTKPLSRCADFRTL---PCDVLVSTPLRLDYVINQ 649
           ++K LS     + +     D+++STPLRL  V+ +
Sbjct: 243 LSKSLSSKLKNKVISEDKYDIIISTPLRLITVVQE 277
tr_hit_id A2YPC3
Definition tr|A2YPC3|A2YPC3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 186
Score (bit) 232.0
E-value 2.0e-59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952297|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_L11, 5'
         (664 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2YPC3|A2YPC3_ORYSI Putative uncharacterized protein OS=Oryza...   232   2e-59
tr|A7PSZ9|A7PSZ9_VITVI Chromosome chr8 scaffold_29, whole genome...   218   3e-55
tr|A5BS93|A5BS93_VITVI Putative uncharacterized protein OS=Vitis...   206   8e-52
tr|A9RWJ2|A9RWJ2_PHYPA Predicted protein (Fragment) OS=Physcomit...   204   4e-51
tr|B6NYH6|B6NYH6_BRAFL Putative uncharacterized protein OS=Branc...   141   3e-32
tr|Q59H21|Q59H21_HUMAN ATP-dependent RNA helicase ROK1 isoform a...   139   2e-31
tr|A8MTP9|A8MTP9_HUMAN Putative uncharacterized protein DDX52 OS...   138   3e-31
tr|A7SFZ1|A7SFZ1_NEMVE Predicted protein (Fragment) OS=Nematoste...   137   8e-31
tr|Q3UZY9|Q3UZY9_MOUSE Putative uncharacterized protein OS=Mus m...   135   2e-30
tr|Q3TKX4|Q3TKX4_MOUSE Putative uncharacterized protein (Fragmen...   135   2e-30
tr|A1EC69|A1EC69_RAT ATP-dependent RNA helicase OS=Rattus norveg...   133   1e-29
tr|A1EC68|A1EC68_RAT ATP-dependent RNA helicase OS=Rattus norveg...   133   1e-29
tr|B6MS62|B6MS62_BRAFL Putative uncharacterized protein OS=Branc...   131   3e-29
tr|B3M3V9|B3M3V9_DROAN GF25239 OS=Drosophila ananassae GN=GF2523...   130   7e-29
tr|Q5FWY7|Q5FWY7_RAT DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 O...   130   1e-28
tr|B4LIG4|B4LIG4_DROVI GJ13954 OS=Drosophila virilis GN=GJ13954 ...   129   2e-28
tr|Q6NWF8|Q6NWF8_DANRE Ddx52 protein (Fragment) OS=Danio rerio G...   128   4e-28
tr|Q32PQ3|Q32PQ3_DANRE Ddx52 protein (Fragment) OS=Danio rerio G...   128   4e-28
tr|Q1ECZ5|Q1ECZ5_DANRE DEAD (Asp-Glu-Ala-Asp) box polypeptide 52...   128   4e-28
tr|Q7ZY19|Q7ZY19_XENLA MGC53409 protein OS=Xenopus laevis PE=2 SV=1   127   6e-28
tr|B3SC12|B3SC12_TRIAD Putative uncharacterized protein (Fragmen...   127   6e-28
tr|Q5I091|Q5I091_XENTR Ddx52-prov protein (Fragment) OS=Xenopus ...   126   1e-27
tr|Q0IJ24|Q0IJ24_XENTR Ddx52 protein (Fragment) OS=Xenopus tropi...   126   1e-27
tr|Q4SFR8|Q4SFR8_TETNG Chromosome 7 SCAF14601, whole genome shot...   125   2e-27
tr|Q68F58|Q68F58_XENLA LOC446276 protein (Fragment) OS=Xenopus l...   124   5e-27
tr|Q4QR54|Q4QR54_XENLA LOC446276 protein (Fragment) OS=Xenopus l...   124   5e-27
tr|Q5F3Y6|Q5F3Y6_CHICK Putative uncharacterized protein OS=Gallu...   124   7e-27
tr|A0AUS6|A0AUS6_XENLA LOC446276 protein OS=Xenopus laevis GN=dd...   124   7e-27
tr|B4L0G8|B4L0G8_DROMO GI13618 OS=Drosophila mojavensis GN=GI136...   123   1e-26
tr|B4J047|B4J047_DROGR GH14471 OS=Drosophila grimshawi GN=GH1447...   122   3e-26

>tr|A2YPC3|A2YPC3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_27114 PE=4 SV=1
          Length = 540

 Score =  232 bits (591), Expect = 2e-59
 Identities = 111/186 (59%), Positives = 142/186 (76%)
 Frame = +2

Query: 92  QELVTAESQADEKQQQRREAARDEESACVLRKKFRVHVSCHNVPAPLSSFQDLGSVYGCQ 271
           +++ T +S+  E  ++R+E  R+ E A +LRKKF +H+S  NVPAPL +F++L S YGC 
Sbjct: 95  KKVETGKSEDSEVVRRRKEVEREIERAAILRKKFDIHISGQNVPAPLENFEELVSRYGCD 154

Query: 272 SYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPILMMLAAPKKN 451
           SYL+ NL   GF EPTP+QRQAIP LLSG+ECFACAPTGSGKTLAF  PILM +    K 
Sbjct: 155 SYLVGNLSKLGFQEPTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKE 214

Query: 452 GIRAVILCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADFRTLPCDVLVSTPLRL 631
           G++AVILCPTR+LA Q T ECK LAKGRKF I+LMTK LS+  +F+ + CD+LVSTPLRL
Sbjct: 215 GVKAVILCPTRELAAQTTRECKKLAKGRKFYIKLMTKDLSKSGNFKDMHCDILVSTPLRL 274

Query: 632 DYVINQ 649
           D+ + +
Sbjct: 275 DHAVQK 280


>tr|A7PSZ9|A7PSZ9_VITVI Chromosome chr8 scaffold_29, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023153001
           PE=4 SV=1
          Length = 524

 Score =  218 bits (555), Expect = 3e-55
 Identities = 109/196 (55%), Positives = 138/196 (70%), Gaps = 4/196 (2%)
 Frame = +2

Query: 74  NIFKPTQELVTAESQADEKQ----QQRREAARDEESACVLRKKFRVHVSCHNVPAPLSSF 241
           N+FK ++       Q D+++    Q ++E  R  E   +LRKK ++H+S +NVP+PL +F
Sbjct: 67  NVFKTSKSSAQGIQQNDQEKSELSQAKKELNRQIERDALLRKKHKIHISGNNVPSPLENF 126

Query: 242 QDLGSVYGCQSYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPI 421
            +L S YGC+SYL+ NL   GF EPTP+QRQAIP LLSG+ECFACAPTGSGKTLAF  P+
Sbjct: 127 SELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTLAFVCPM 186

Query: 422 LMMLAAPKKNGIRAVILCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADFRTLPC 601
           LM L    K+GIRAVILCPTR+LA Q   E K LAKG+KF I+L+TK L R  D   LPC
Sbjct: 187 LMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLLTKELLRSGDISKLPC 246

Query: 602 DVLVSTPLRLDYVINQ 649
           D+L+STPLRL   I +
Sbjct: 247 DILISTPLRLRSAIRK 262


>tr|A5BS93|A5BS93_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_032421 PE=4 SV=1
          Length = 554

 Score =  206 bits (525), Expect = 8e-52
 Identities = 106/196 (54%), Positives = 134/196 (68%), Gaps = 4/196 (2%)
 Frame = +2

Query: 74  NIFKPTQELVTAESQADEKQ----QQRREAARDEESACVLRKKFRVHVSCHNVPAPLSSF 241
           N+FK ++       Q D+++    Q ++E  R  E   +LRKK  +H+S +NVP+PL +F
Sbjct: 67  NVFKTSKSSAQGIQQNDQEKSELSQAKKELNRQIERDALLRKKHXIHISGNNVPSPLENF 126

Query: 242 QDLGSVYGCQSYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPI 421
            +L S YGC+SYL+ NL   GF EPTP+QRQAIP    G+ECFACAPTGSGKTLAF  P+
Sbjct: 127 SELSSRYGCESYLLHNLAELGFKEPTPIQRQAIP----GRECFACAPTGSGKTLAFVCPM 182

Query: 422 LMMLAAPKKNGIRAVILCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADFRTLPC 601
           LM L    K+GIRAVILCPTR+LA Q   E K LAKG+KF I+L+TK L R  D   LPC
Sbjct: 183 LMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLLTKELLRSGDISKLPC 242

Query: 602 DVLVSTPLRLDYVINQ 649
           D+L+STPLRL   I +
Sbjct: 243 DILISTPLRLRSAIRK 258


>tr|A9RWJ2|A9RWJ2_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_41894 PE=4 SV=1
          Length = 405

 Score =  204 bits (519), Expect = 4e-51
 Identities = 96/154 (62%), Positives = 121/154 (78%)
 Frame = +2

Query: 182 RKKFRVHVSCHNVPAPLSSFQDLGSVYGCQSYLMRNLGLAGFLEPTPVQRQAIPALLSGQ 361
           RKK+++HVS  +VPAPL +F+ L + Y C+ YLM+N+  AG+ EPTP+QRQAI  LL+ +
Sbjct: 3   RKKYQIHVSGRDVPAPLVAFEQLRTQYRCRKYLMKNIKEAGYTEPTPIQRQAITTLLAER 62

Query: 362 ECFACAPTGSGKTLAFALPILMMLAAPKKNGIRAVILCPTRQLAKQITMECKSLAKGRKF 541
           ECFACAPTGSGKTLAF+LPILM L  P K G+RA++LCPTR+LA Q T E K L  G KF
Sbjct: 63  ECFACAPTGSGKTLAFSLPILMKLRVPSKEGLRALVLCPTRELALQTTRELKKLTVGTKF 122

Query: 542 RIRLMTKPLSRCADFRTLPCDVLVSTPLRLDYVI 643
           R+R+MTK L+ C DF  LPCD+LVSTPLRLD ++
Sbjct: 123 RVRVMTKALALCNDFSNLPCDILVSTPLRLDALL 156


>tr|B6NYH6|B6NYH6_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_239041 PE=4 SV=1
          Length = 595

 Score =  141 bits (356), Expect = 3e-32
 Identities = 79/189 (41%), Positives = 111/189 (58%), Gaps = 11/189 (5%)
 Frame = +2

Query: 116 QADEKQQQRREAARD--------EESACVLRKKFRVHVSCHNVPAPLSSFQDLGSVYGCQ 271
           +A EK+++R++            +E     R+K R+HV   ++P P++SFQ+L  VYG  
Sbjct: 128 KASEKKKKRKKKGLTVNKVEQIKQEKVKHFRRKNRIHVQGSDIPTPVTSFQELQGVYGIH 187

Query: 272 SYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPILMMLAAPKKN 451
             ++ NL   G+ EPTP+Q QAIP +L  +E  ACAPTGSGKT AF LPIL  L  P++ 
Sbjct: 188 PQIITNLQGLGYEEPTPIQMQAIPLMLQRREILACAPTGSGKTAAFILPILHHLREPRRQ 247

Query: 452 GIRAVILCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADF---RTLPCDVLVSTP 622
           G RAV++ PTR+LAKQ     + L +GR FR   + KP      F        D+LV+TP
Sbjct: 248 GFRAVVVSPTRELAKQTFTWFQRLGEGRGFRTYYIEKPAQAAKKFGPNSAKKFDILVTTP 307

Query: 623 LRLDYVINQ 649
            RL Y++ Q
Sbjct: 308 NRLVYMLKQ 316


>tr|Q59H21|Q59H21_HUMAN ATP-dependent RNA helicase ROK1 isoform a
           variant (Fragment) OS=Homo sapiens PE=2 SV=1
          Length = 512

 Score =  139 bits (350), Expect = 2e-31
 Identities = 79/196 (40%), Positives = 115/196 (58%), Gaps = 10/196 (5%)
 Frame = +2

Query: 92  QELVTAESQADEKQQQRREAARD-------EESACVLRKKFRVHVSCHNVPAPLSSFQDL 250
           Q + + E++ ++K+ QR             +E    LR K ++HV   ++P P+++FQ L
Sbjct: 106 QWMSSVEAKIEDKKVQRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQL 165

Query: 251 GSVYGCQSYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPILMM 430
              Y   S L++N+  AGF  PTP+Q QAIP +L G+E  A APTGSGKTLAF++PILM 
Sbjct: 166 DQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQ 225

Query: 431 LAAPKKNGIRAVILCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADF---RTLPC 601
           L  P   G RA+I+ PTR+LA QI  E   +++G  FRI ++ K       F    +   
Sbjct: 226 LKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKF 285

Query: 602 DVLVSTPLRLDYVINQ 649
           D+LV+TP RL Y++ Q
Sbjct: 286 DILVTTPNRLIYLLKQ 301


>tr|A8MTP9|A8MTP9_HUMAN Putative uncharacterized protein DDX52
           OS=Homo sapiens GN=DDX52 PE=4 SV=1
          Length = 491

 Score =  138 bits (348), Expect = 3e-31
 Identities = 78/192 (40%), Positives = 113/192 (58%), Gaps = 10/192 (5%)
 Frame = +2

Query: 104 TAESQADEKQQQRREAARD-------EESACVLRKKFRVHVSCHNVPAPLSSFQDLGSVY 262
           + E++ ++K+ QR             +E    LR K ++HV   ++P P+++FQ L   Y
Sbjct: 3   SVEAKIEDKKVQRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEY 62

Query: 263 GCQSYLMRNLGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPILMMLAAP 442
              S L++N+  AGF  PTP+Q QAIP +L G+E  A APTGSGKTLAF++PILM L  P
Sbjct: 63  KINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQP 122

Query: 443 KKNGIRAVILCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADF---RTLPCDVLV 613
              G RA+I+ PTR+LA QI  E   +++G  FRI ++ K       F    +   D+LV
Sbjct: 123 ANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILV 182

Query: 614 STPLRLDYVINQ 649
           +TP RL Y++ Q
Sbjct: 183 TTPNRLIYLLKQ 194


>tr|A7SFZ1|A7SFZ1_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g116885 PE=3 SV=1
          Length = 471

 Score =  137 bits (344), Expect = 8e-31
 Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
 Frame = +2

Query: 110 ESQADEKQQQRREAARDEESACVLRKKFRVHVSCHNVPAPLSSFQDLGSVYGCQSYLMRN 289
           + Q + K    + A + +E   + R +  ++V   +VP P+ +F  L   YG   Y++ N
Sbjct: 2   KKQKENKLSANKLAEKHQEKINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHN 61

Query: 290 LGLAGFLEPTPVQRQAIPALLSGQECFACAPTGSGKTLAFALPILMMLAAPKKNGIRAVI 469
           +   G+  PTP+Q QA P +  G+E   CAPTGSGKT AF LPIL ML  PKK+G RAV+
Sbjct: 62  VQERGYTTPTPIQMQATPLMAHGREVLCCAPTGSGKTAAFILPILHMLKGPKKSGFRAVV 121

Query: 470 LCPTRQLAKQITMECKSLAKGRKFRIRLMTKPLSRCADF---RTLPCDVLVSTPLRLDYV 640
           + PTR+LA+QI  E   LAKG  FRI ++TK  +    F    +   D+LV+TP RL ++
Sbjct: 122 VSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRLVHL 181

Query: 641 INQ 649
           + Q
Sbjct: 182 LTQ 184


>tr|Q3UZY9|Q3UZY9_MOUSE Putative uncharacterized protein OS=Mus
           musculus GN=Ddx52 PE=2 SV=1
          Length = 598

 Score =  135 bits (340), Expect = 2e-30
 Identities = 72/166 (43%), Positives = 102/166 (61%), Gaps = 3/166 (1%)
 Frame = +2

Query: 161 EESACVLRKKFRVHVSCHNVPAPLSSFQDLGSVYGCQSYLMRNLGLAGFLEPTPVQRQAI 340
           +E     R K ++HV   ++P P+++FQ L   Y   S L++N+  AGF  PTP+Q QAI
Sbjct: 138 KEKVNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQVPTPIQMQAI 197

Query: 341 PALLSGQECFACAPTGSGKTLAFALPILMMLAAPKKNGIRAVILCPTRQLAKQITMECKS 520
           P +L G+E  A APTGSGKTLAF++PILM L  P   G RA+++ PTR+LA QI  E   
Sbjct: 198 PVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIK 257

Query: 521 LAKGRKFRIRLMTKPLSRCADF---RTLPCDVLVSTPLRLDYVINQ 649
           +++G  FRI ++ K       F    +   D+LV+TP RL Y++ Q
Sbjct: 258 ISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQ 303


>tr|Q3TKX4|Q3TKX4_MOUSE Putative uncharacterized protein (Fragment)
           OS=Mus musculus GN=Ddx52 PE=2 SV=1
          Length = 595

 Score =  135 bits (340), Expect = 2e-30
 Identities = 72/166 (43%), Positives = 102/166 (61%), Gaps = 3/166 (1%)
 Frame = +2

Query: 161 EESACVLRKKFRVHVSCHNVPAPLSSFQDLGSVYGCQSYLMRNLGLAGFLEPTPVQRQAI 340
           +E     R K ++HV   ++P P+++FQ L   Y   S L++N+  AGF  PTP+Q QAI
Sbjct: 138 KEKVNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQVPTPIQMQAI 197

Query: 341 PALLSGQECFACAPTGSGKTLAFALPILMMLAAPKKNGIRAVILCPTRQLAKQITMECKS 520
           P +L G+E  A APTGSGKTLAF++PILM L  P   G RA+++ PTR+LA QI  E   
Sbjct: 198 PVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIK 257

Query: 521 LAKGRKFRIRLMTKPLSRCADF---RTLPCDVLVSTPLRLDYVINQ 649
           +++G  FRI ++ K       F    +   D+LV+TP RL Y++ Q
Sbjct: 258 ISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQ 303