DK952330 |
Clone id |
TST38A01NGRL0013_M20 |
Library |
TST38 |
Length |
650 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_M20. 5' end sequence. |
Accession |
DK952330 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL261Contig1 |
Sequence |
CAGCTTGCATGTTCCTGGCTGGGAAGGTGGAGGAGACTCCAAAATTACTGCAGAATGTCC TCTCTCTTTCCTATGATATAAGACACAAAAGAGACAAAGTAGCTGCGGAGCGAATTAAAC AGAAGGAGGTCTATGAGCACGAGAAGGAGCAAGTTTTGCTAGCAGAAAATGTAGTCCTTC AAACTTTGGGTTTTGAGCTCAATGTCATCCATCCGTACAAGCGTTTGGTAGCAGCTGTTA AGAAGCTCAAAGTTACAGAGAAATCTTTGGCTCAAGTTGCTTGGAATTTCTTAAATGATG CGTTGAGGACATCGCTATGCCTGCAGTATGAGGCTCATTATATTGCAGCTGGGGGCATTT TCCTTGCAGCAAAGTTTCTGAAAATGAAGCTGCCAACCGACTGCGAAAAGCCCTGGTGGC AAGAGCTGGAGGTTACTGCCCGGCAATTAGAAGATGTGAGTAATCAGATGCTGGAATTGT ATGAGCATCACCGGGATTCAACTCCTAGTCCTAGCGGTATTACAGGAAGCGTGGTCCCCC CCCAGGCCCCTCCTGCCACACCCCAAGTGACAGTGAAAAGGAACACCAAGCTGAGAGAGA AGGAAGCCGACTGCGACTGCTCAAGTATACAGGGTAATGTCTCAAGTATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2RAC5 |
Definition |
sp|Q2RAC5|CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp. japonica |
Align length |
171 |
Score (bit) |
225.0 |
E-value |
1.0e-58 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8BJ73 |
Definition |
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
171 |
Score (bit) |
225.0 |
E-value |
2.0e-57 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952330|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_M20, 5' (650 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza... 225 2e-57 tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequen... 223 1e-56 tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza... 223 1e-56 tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whol... 222 2e-56 tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medic... 220 5e-56 tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 213 6e-54 tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza... 211 4e-53 tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medic... 198 3e-49 tr|A9SK15|A9SK15_PHYPA Predicted protein (Fragment) OS=Physcomit... 192 2e-47 tr|A7QCS7|A7QCS7_VITVI Chromosome undetermined scaffold_79, whol... 186 1e-45 tr|A9SUA9|A9SUA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 176 1e-42 tr|A7NT76|A7NT76_VITVI Chromosome chr18 scaffold_1, whole genome... 157 4e-37 tr|A5C1E2|A5C1E2_VITVI Putative uncharacterized protein OS=Vitis... 157 4e-37 tr|A5B2H4|A5B2H4_VITVI Putative uncharacterized protein OS=Vitis... 155 2e-36 tr|B6SH69|B6SH69_MAIZE Cyclin-dependent protein kinase OS=Zea ma... 152 2e-35 tr|B8AH65|B8AH65_ORYSI Putative uncharacterized protein OS=Oryza... 147 5e-34 tr|B7F0D1|B7F0D1_ORYSJ cDNA clone:002-129-H05, full insert seque... 147 5e-34 tr|B8AH26|B8AH26_ORYSI Putative uncharacterized protein OS=Oryza... 143 8e-33 tr|A3A6C4|A3A6C4_ORYSJ Putative uncharacterized protein OS=Oryza... 142 1e-32 tr|Q54LJ0|Q54LJ0_DICDI Cyclin OS=Dictyostelium discoideum GN=cyc... 139 2e-31 tr|Q01EB0|Q01EB0_OSTTA CycK CycK-related cyclin family protein (... 133 1e-29 tr|A4RSP3|A4RSP3_OSTLU CycK-related cyclin family protein OS=Ost... 132 1e-29 tr|A9SI06|A9SI06_PHYPA Predicted protein OS=Physcomitrella paten... 116 1e-24 tr|A9SUB1|A9SUB1_PHYPA Predicted protein OS=Physcomitrella paten... 114 4e-24 tr|Q6EEW1|Q6EEW1_MEDTR Cyclin T1 OS=Medicago truncatula PE=2 SV=1 113 1e-23 tr|A8I762|A8I762_CHLRE L-type cyclin (Fragment) OS=Chlamydomonas... 105 3e-21 tr|A7NWJ7|A7NWJ7_VITVI Chromosome chr5 scaffold_2, whole genome ... 104 5e-21 tr|B6NWU7|B6NWU7_BRAFL Putative uncharacterized protein OS=Branc... 103 1e-20 tr|B6UF70|B6UF70_MAIZE Putative uncharacterized protein OS=Zea m... 102 2e-20 tr|B6NH25|B6NH25_BRAFL Putative uncharacterized protein OS=Branc... 102 2e-20
>tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35185 PE=4 SV=1 Length = 490
Score = 225 bits (574), Expect = 2e-57 Identities = 110/171 (64%), Positives = 133/171 (77%) Frame = +3
Query: 6 CMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQT 185 CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQKEVYE +KE +LL E VVL T Sbjct: 113 CMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQKEVYEQQKELILLGERVVLVT 172
Query: 186 LGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFL 365 LGF+LNV HPYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFL Sbjct: 173 LGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 232
Query: 366 AAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSG 518 AAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLELYE +R + P G Sbjct: 233 AAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVAPPPSQG 283
>tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 543
Score = 223 bits (567), Expect = 1e-56 Identities = 109/170 (64%), Positives = 133/170 (78%) Frame = +3
Query: 6 CMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQT 185 CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQKEVY+ +KE +LLAE VVL T Sbjct: 112 CMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILLAERVVLAT 171
Query: 186 LGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFL 365 LGF+LNV HPYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFL Sbjct: 172 LGFDLNVHHPYKPLVEAIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 231
Query: 366 AAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPS 515 AAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLELYE + + PS Sbjct: 232 AAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNCAAQAQPS 281
>tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034708 PE=3 SV=1 Length = 683
Score = 223 bits (567), Expect = 1e-56 Identities = 109/170 (64%), Positives = 133/170 (78%) Frame = +3
Query: 6 CMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQT 185 CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQKEVY+ +KE +LLAE VVL T Sbjct: 140 CMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILLAERVVLAT 199
Query: 186 LGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFL 365 LGF+LNV HPYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFL Sbjct: 200 LGFDLNVHHPYKPLVEAIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 259
Query: 366 AAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPS 515 AAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLELYE + + PS Sbjct: 260 AAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNCAAQAQPS 309
>tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035737001 PE=3 SV=1 Length = 523
Score = 222 bits (565), Expect = 2e-56 Identities = 110/175 (62%), Positives = 134/175 (76%) Frame = +3
Query: 6 CMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQT 185 CMFLAGKVEETP+ L++V+ +SY+I +K+D A +RIKQKEVYE +KE +LL E VVL T Sbjct: 109 CMFLAGKVEETPRPLKDVILVSYEIINKKDPAAVQRIKQKEVYEQQKELILLGERVVLAT 168
Query: 186 LGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFL 365 LGF+LNV HPYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFL Sbjct: 169 LGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 228
Query: 366 AAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSGITGS 530 AAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLELYE +R S + GS Sbjct: 229 AAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSQGSEVEGS 283
>tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 395
Score = 220 bits (561), Expect = 5e-56 Identities = 107/163 (65%), Positives = 130/163 (79%) Frame = +3
Query: 6 CMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQT 185 CMFLAGKVEETP+ L++V+ +SY++ HK+D AA+RIKQKEVYE +KE +LL E VVL T Sbjct: 110 CMFLAGKVEETPRPLKDVILISYEMIHKKDPAAAQRIKQKEVYEQQKELILLGERVVLAT 169
Query: 186 LGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFL 365 L F+LNV HPYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFL Sbjct: 170 LAFDLNVQHPYKPLVEAIKKFNVAKNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 229
Query: 366 AAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHHR 494 AAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLELYE +R Sbjct: 230 AAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNR 272
>tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_42949 PE=3 SV=1 Length = 406
Score = 213 bits (543), Expect = 6e-54 Identities = 103/170 (60%), Positives = 130/170 (76%) Frame = +3
Query: 6 CMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQT 185 CMFLAGKVEETP+ L+ V+ SY+IR K+D +A +RI+QK+VYE +KE VL E ++L T Sbjct: 79 CMFLAGKVEETPRPLREVIMFSYEIRFKKDPIAVQRIRQKDVYEDQKELVLGGERLLLTT 138
Query: 186 LGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFL 365 LGF+LNV HPYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFL Sbjct: 139 LGFDLNVHHPYKPLVAAIKKFKVAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 198
Query: 366 AAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPS 515 AAKFLK+ LP D +K WWQ+ EVT RQLE+VSNQMLELYE ++ + P+ S Sbjct: 199 AAKFLKVNLPKDGDKVWWQQFEVTPRQLEEVSNQMLELYEQNKSNGPTGS 248
>tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031709 PE=3 SV=1 Length = 495
Score = 211 bits (536), Expect = 4e-53 Identities = 107/176 (60%), Positives = 130/176 (73%), Gaps = 5/176 (2%) Frame = +3
Query: 6 CMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE-----VYEHEKEQVLLAEN 170 CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQK V +KE +LL E Sbjct: 113 CMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQKSLDYFGVEWQQKELILLGER 172
Query: 171 VVLQTLGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAA 350 VVL TLGF+LNV HPYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAA Sbjct: 173 VVLVTLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAA 232
Query: 351 GGIFLAAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSG 518 G IFLAAKFLK+KLP+D EK WWQE +VT RQLE+VSNQMLELYE +R + P G Sbjct: 233 GAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVAPPPSQG 288
>tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 265
Score = 198 bits (503), Expect = 3e-49 Identities = 96/149 (64%), Positives = 117/149 (78%) Frame = +3
Query: 6 CMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQT 185 CMFLAGKVEETP+ L++V+ +SY+I +K+D A +RIKQKEVYE +KE +LLAE VVL T Sbjct: 109 CMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAVQRIKQKEVYEQQKELILLAERVVLAT 168
Query: 186 LGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFL 365 LGF+ NV HPYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFL Sbjct: 169 LGFDFNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 228
Query: 366 AAKFLKMKLPTDCEKPWWQELEVTARQLE 452 AAKFLK+KLP+D EK WWQE +VT RQLE Sbjct: 229 AAKFLKVKLPSDGEKVWWQEFDVTPRQLE 257
>tr|A9SK15|A9SK15_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_17473 PE=3 SV=1 Length = 230
Score = 192 bits (487), Expect = 2e-47 Identities = 98/162 (60%), Positives = 117/162 (72%) Frame = +3
Query: 6 CMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQT 185 CMFLAGKVEETP+ L+ V+ SY IR K+D +A ERIKQK VL E +VL T Sbjct: 77 CMFLAGKVEETPRPLREVIVFSYHIRFKKDPLAKERIKQK--------LVLAGERLVLTT 128
Query: 186 LGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFL 365 LGF+LN+ HPYK + +LAQVAWNF+ND LRTSLCLQ++ H+IAAG IFL Sbjct: 129 LGFDLNIHHPYKPLVAAIKRFKVAQNTLAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFL 188
Query: 366 AAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHH 491 AAKFLK+ LP + +K WWQE EVT RQLE+VSNQMLELYE + Sbjct: 189 AAKFLKVNLPKEGDKVWWQEFEVTPRQLEEVSNQMLELYEQN 230
>tr|A7QCS7|A7QCS7_VITVI Chromosome undetermined scaffold_79, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035533001 PE=3 SV=1 Length = 502
Score = 186 bits (472), Expect = 1e-45 Identities = 99/171 (57%), Positives = 122/171 (71%) Frame = +3
Query: 6 CMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQT 185 CMFLAGKVEETP+ L++V+ +SY+I HKRD A ++IKQKEVYE +KE +L+ E VVL T Sbjct: 109 CMFLAGKVEETPRPLKDVILVSYEIIHKRDPAAVQKIKQKEVYEQQKELILIGERVVLAT 168
Query: 186 LGFELNVIHPYKRXXXXXXXXXXTEKSLAQVAWNFLNDALRTSLCLQYEAHYIAAGGIFL 365 LGF+LNV HPYK + S + W LRTSLCLQ++ +IAAG IFL Sbjct: 169 LGFDLNVHHPYKPLFHFKWSLFLSFSS-SLTHWK-AACRLRTSLCLQFKPDHIAAGAIFL 226
Query: 366 AAKFLKMKLPTDCEKPWWQELEVTARQLEDVSNQMLELYEHHRDSTPSPSG 518 AAKFLK+KLP+D E WWQE +VT RQLE++SNQMLELYE +R P P G Sbjct: 227 AAKFLKVKLPSDGEVVWWQEFDVTPRQLEEISNQMLELYEQNR--VPPPQG 275
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