DK952331 |
Clone id |
TST38A01NGRL0013_M21 |
Library |
TST38 |
Length |
623 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_M21. 5' end sequence. |
Accession |
DK952331 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL20Contig1 |
Sequence |
CTACATCGCACCGGCTTTCATGGACAAGTTGGTGGTGCACATTGCCAAGAACTTTATGAA CCTTCCCAATATTAAGATTCCTTTGATTCTTGGTATTTGGGGTGGAAAAGGACAAGGAAA ATCTTTCCAGTGTGAACTAGTGTTCTCAAAGCTTGGAATCAACCCCATCATGATGAGTGC TGGTGAGCTCGAGAGTGGAAATGCTGGTGAACCCGCCAAGCTCATTCGACAGAGATACCG TGAAGCTGCGGATGTGATTCGAAAGAAAGGAAAGATGTGTTGTCTCTTTATCAATGATCT TGACGCTGGAGCTGGTCGCATGGGTGGAACAACACAATATACTGTCAACAATCAGATGGT GAATGCAACCCTCATGAACATTGCTGACAATCCTACCAATGTCCAGCTGCCTGGTGTGTA CATTAAGGAGGAGCTCCCACGCGTGCCCATCATCGTAACTGGAAATGACTTCTCCACACT GTATGCACCCTTGATCCGAGATGGTCGTATGGAGAAATTCTACTGGGCGCCCACAAGAGA AGATAGAATTGGAGTTTGCTTGGGTATCTTCCGTCATGATAACGTGAAAGACGATGACAT TACAAAGATTGTTGATACATTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7X9A0 |
Definition |
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata |
Align length |
207 |
Score (bit) |
393.0 |
E-value |
1.0e-109 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952331|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_M21, 5' (623 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase... 393 e-109 sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 389 e-108 sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase... 388 e-107 sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 381 e-105 sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ... 380 e-105 sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ... 380 e-105 sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 378 e-104 sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ... 377 e-104 sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ... 376 e-104 sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase... 376 e-104 sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ... 376 e-104 sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 374 e-103 sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ... 370 e-102 sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ... 369 e-102 sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ... 367 e-101 sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ... 353 5e-97 sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ... 293 6e-79 sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ... 292 8e-79 sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ... 108 3e-23 sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ... 74 6e-13 sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_... 57 1e-07 sp|P62335|PRS10_SPETR 26S protease regulatory subunit S10B OS=Sp... 52 2e-06 sp|P62334|PRS10_MOUSE 26S protease regulatory subunit S10B OS=Mu... 52 2e-06 sp|P62333|PRS10_HUMAN 26S protease regulatory subunit S10B OS=Ho... 52 2e-06 sp|Q2KIW6|PRS10_BOVIN 26S protease regulatory subunit S10B OS=Bo... 52 2e-06 sp|O74445|PRS10_SCHPO Probable 26S protease subunit rpt4 OS=Schi... 50 7e-06 sp|Q9HPF0|CDCH_HALSA Protein cdcH OS=Halobacterium salinarium GN... 47 8e-05 sp|P24004|PEX1_YEAST Peroxisome biosynthesis protein PAS1 OS=Sac... 44 5e-04 sp|Q9HRW6|PSMR2_HALSA Proteasome-activating nucleotidase 2 OS=Ha... 44 7e-04 sp|P46463|PEX1_PICPA Peroxisome biosynthesis protein PAS1 OS=Pic... 44 7e-04
>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1 Length = 476
Score = 393 bits (1009), Expect = e-109 Identities = 192/207 (92%), Positives = 199/207 (96%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 132 YIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 191
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV Sbjct: 192 GELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 250
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE Sbjct: 251 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 310
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC GIFR DNV DDDI K+VDTF Sbjct: 311 DRIGVCKGIFRTDNVADDDIVKLVDTF 337
>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2 Length = 466
Score = 389 bits (998), Expect = e-108 Identities = 188/207 (90%), Positives = 199/207 (96%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI+KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 123 YIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 182
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV Sbjct: 183 GELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 241
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+ Sbjct: 242 NATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 301
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DR+GVC GIFR DNV D+DI KIVD+F Sbjct: 302 DRVGVCKGIFRTDNVPDEDIVKIVDSF 328
>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1 Length = 435
Score = 388 bits (996), Expect = e-107 Identities = 189/207 (91%), Positives = 198/207 (95%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 132 YIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 191
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV Sbjct: 192 GELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 250
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE Sbjct: 251 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 310
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC GIFR DNV ++DI K+VD F Sbjct: 311 DRIGVCKGIFRTDNVPEEDIVKVVDQF 337
>sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1 Length = 464
Score = 381 bits (979), Expect = e-105 Identities = 185/207 (89%), Positives = 196/207 (94%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVH++KNFM LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 122 YIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 181
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV Sbjct: 182 GELESGNAGEPAKLIRQRYREAADMI-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 240
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIAD PTNVQLPG+Y K E PRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+ Sbjct: 241 NATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 300
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC GIF+ DNV D+ + KIVDTF Sbjct: 301 DRIGVCKGIFQTDNVSDESVVKIVDTF 327
>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1 Length = 413
Score = 380 bits (977), Expect = e-105 Identities = 183/207 (88%), Positives = 195/207 (94%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKL VHI KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 129 YIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSA 188
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGR+GGTTQYTVNNQMV Sbjct: 189 GELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMV 247
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRM+KFYWAPTRE Sbjct: 248 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTRE 307
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIG+C GIFR D V +DI K+VDTF Sbjct: 308 DRIGICTGIFRTDGVPFEDIVKLVDTF 334
>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1 Length = 437
Score = 380 bits (976), Expect = e-105 Identities = 185/207 (89%), Positives = 196/207 (94%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI KNFM LPN+K+PLILGIWGGKGQGKSFQCELVF+K+ I+PIMMSA Sbjct: 132 YIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSA 191
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+IRK GKMC LFINDLDAGAGR+GGTTQYTVNNQMV Sbjct: 192 GELESGNAGEPAKLIRQRYREAADIIRK-GKMCALFINDLDAGAGRLGGTTQYTVNNQMV 250
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE Sbjct: 251 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 310
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC+GIFR DNV +DI K+VDTF Sbjct: 311 DRIGVCIGIFRSDNVAKEDIVKLVDTF 337
>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 442
Score = 378 bits (970), Expect = e-104 Identities = 184/207 (88%), Positives = 193/207 (93%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF K+GINPIMMSA Sbjct: 136 YIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSA 195
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAA++IRK G MCCLFINDLDAGAGRMGGTTQYTVNNQMV Sbjct: 196 GELESGNAGEPAKLIRQRYREAAEIIRK-GNMCCLFINDLDAGAGRMGGTTQYTVNNQMV 254
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y K+E RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE Sbjct: 255 NATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 314
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC GIFR DNV +D+ KIVD F Sbjct: 315 DRIGVCTGIFRTDNVPAEDVVKIVDNF 341
>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2 Length = 474
Score = 377 bits (969), Expect = e-104 Identities = 184/207 (88%), Positives = 193/207 (93%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI KNF+ LPNIK+PLILGIWGGKGQGKSFQCELV +K+GINPIMMSA Sbjct: 132 YIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSA 191
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV Sbjct: 192 GELESGNAGEPAKLIRQRYREAADLI-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 250
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KEE RVPII TGNDFSTLYAPLIRDGRMEKFYWAPTRE Sbjct: 251 NATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTRE 310
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC GIFR D +KD+DI +VD F Sbjct: 311 DRIGVCKGIFRTDKIKDEDIVTLVDQF 337
>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2 Length = 439
Score = 376 bits (966), Expect = e-104 Identities = 183/207 (88%), Positives = 195/207 (94%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAF+DKLVVHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 134 YIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 193
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I K GKMC LFINDLDAGAGR+GGTTQYTVNNQMV Sbjct: 194 GELESGNAGEPAKLIRQRYREAADLIAK-GKMCALFINDLDAGAGRLGGTTQYTVNNQMV 252
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KEE RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+ Sbjct: 253 NATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 312
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DR+GVC GIFR D V ++DITK+VDTF Sbjct: 313 DRVGVCKGIFRTDGVPEEDITKLVDTF 339
>sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1 Length = 425
Score = 376 bits (966), Expect = e-104 Identities = 184/207 (88%), Positives = 195/207 (94%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKL+VH+AKNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 120 YIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 179
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGN GEPAKLIRQRYREAAD+I K GKMCCLFINDLDAGAGRMGGTTQYTVNNQMV Sbjct: 180 GELESGN-GEPAKLIRQRYREAADIINK-GKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 237
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIAD PTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE Sbjct: 238 NATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 297
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC GIFR DNV D+ + ++VDTF Sbjct: 298 DRIGVCKGIFRTDNVPDEAVVRLVDTF 324
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PFQ2 |
Definition |
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
207 |
Score (bit) |
393.0 |
E-value |
1.0e-108 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952331|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_M21, 5' (623 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul... 393 e-108 tr|A9PG25|A9PG25_POPTR Putative uncharacterized protein OS=Popul... 393 e-108 tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ... 392 e-108 tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis... 392 e-108 tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul... 391 e-107 tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul... 390 e-107 tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul... 390 e-107 tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 389 e-107 tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 389 e-107 tr|Q9ATC1|Q9ATC1_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 389 e-107 tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 389 e-107 tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 389 e-107 tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza... 389 e-106 tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen... 389 e-106 tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom... 388 e-106 tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten... 388 e-106 tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome... 387 e-106 tr|Q9AXG0|Q9AXG0_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 387 e-106 tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car... 387 e-106 tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten... 386 e-106 tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t... 386 e-106 tr|Q7X9A1|Q7X9A1_DESAN Rubisco activase beta form OS=Deschampsia... 385 e-105 tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car... 385 e-105 tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car... 385 e-105 tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten... 385 e-105 tr|Q308Y6|Q308Y6_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 384 e-105 tr|Q05C31|Q05C31_HUMAN Putative uncharacterized protein OS=Homo ... 383 e-105 tr|Q9M4V3|Q9M4V3_WHEAT Ribulose bisphosphate carboxylase activas... 383 e-105 tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car... 381 e-104 tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car... 381 e-104
>tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 475
Score = 393 bits (1010), Expect = e-108 Identities = 186/207 (89%), Positives = 202/207 (97%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDK+VVHI+KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSA Sbjct: 134 YIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSA 193
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I+KKGKMCCLFINDLDAGAGR+GGTTQYTVNNQMV Sbjct: 194 GELESGNAGEPAKLIRQRYREAADIIKKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMV 253
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE Sbjct: 254 NATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 313
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC+GIF+ DNV +DDI K+VDTF Sbjct: 314 DRIGVCIGIFKTDNVPEDDIVKLVDTF 340
>tr|A9PG25|A9PG25_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 361
Score = 393 bits (1009), Expect = e-108 Identities = 185/207 (89%), Positives = 202/207 (97%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDK+VVHI+KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSA Sbjct: 55 YIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSA 114
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I+KKGKMCCLFINDLDAGAGR+GGTTQYTVNNQMV Sbjct: 115 GELESGNAGEPAKLIRQRYREAADIIKKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMV 174
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KE+ PRVP+IVTGNDFSTLYAPLIRDGRMEKFYWAPTRE Sbjct: 175 NATLMNIADNPTNVQLPGMYNKEDNPRVPVIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 234
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC+GIF+ DNV +DDI K+VDTF Sbjct: 235 DRIGVCIGIFKTDNVPEDDIVKLVDTF 261
>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001 PE=4 SV=1 Length = 472
Score = 392 bits (1008), Expect = e-108 Identities = 192/207 (92%), Positives = 197/207 (95%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSA Sbjct: 132 YIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSA 191
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+IRK GKMCCLFINDLDAGAGR+GGTTQYTVNNQMV Sbjct: 192 GELESGNAGEPAKLIRQRYREAADIIRK-GKMCCLFINDLDAGAGRLGGTTQYTVNNQMV 250
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAP RE Sbjct: 251 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPNRE 310
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC GIFR DNV DDDI KIVDTF Sbjct: 311 DRIGVCKGIFRSDNVPDDDIVKIVDTF 337
>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039112 PE=4 SV=1 Length = 472
Score = 392 bits (1008), Expect = e-108 Identities = 192/207 (92%), Positives = 197/207 (95%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSA Sbjct: 132 YIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSA 191
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+IRK GKMCCLFINDLDAGAGR+GGTTQYTVNNQMV Sbjct: 192 GELESGNAGEPAKLIRQRYREAADIIRK-GKMCCLFINDLDAGAGRLGGTTQYTVNNQMV 250
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAP RE Sbjct: 251 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPNRE 310
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC GIFR DNV DDDI KIVDTF Sbjct: 311 DRIGVCKGIFRSDNVPDDDIVKIVDTF 337
>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 461
Score = 391 bits (1005), Expect = e-107 Identities = 185/207 (89%), Positives = 201/207 (97%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDK+VVHI+KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSA Sbjct: 134 YIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSA 193
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I+KKGKMCCLFINDLDAGAGR+GGTTQYTVNNQMV Sbjct: 194 GELESGNAGEPAKLIRQRYREAADIIKKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMV 253
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+ Sbjct: 254 NATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 313
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC+GIF+ DNV DDI K+VDTF Sbjct: 314 DRIGVCIGIFKTDNVPQDDIVKLVDTF 340
>tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 476
Score = 390 bits (1003), Expect = e-107 Identities = 184/207 (88%), Positives = 200/207 (96%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI+KNFM+LPNIK+PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 133 YIAPAFMDKLVVHISKNFMSLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSA 192
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I+KKGKMCCLFINDLDAGAGR+GGTTQYTVNNQMV Sbjct: 193 GELESGNAGEPAKLIRQRYREAADIIKKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMV 252
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+ Sbjct: 253 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 312
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC+GIF+ D + +DI K+VDTF Sbjct: 313 DRIGVCIGIFKSDKIPKEDIVKLVDTF 339
>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 476
Score = 390 bits (1001), Expect = e-107 Identities = 184/207 (88%), Positives = 200/207 (96%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI+KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 133 YIAPAFMDKLVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 192
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I+KKGKMCCLFINDLDAGAGR+GGTTQYTVNNQMV Sbjct: 193 GELESGNAGEPAKLIRQRYREAADIIKKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMV 252
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KE+ PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+ Sbjct: 253 NATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 312
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC+GIF+ D + +DI K+VDTF Sbjct: 313 DRIGVCIGIFKSDKIAKEDIVKLVDTF 339
>tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 OS=Gossypium hirsutum PE=2 SV=1 Length = 438
Score = 389 bits (999), Expect = e-107 Identities = 190/207 (91%), Positives = 197/207 (95%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI KN+M LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 135 YIAPAFMDKLVVHITKNYMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 194
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV Sbjct: 195 GELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 253
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y KEE PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE Sbjct: 254 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 313
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DRIGVC GIFR DNV DDI K+VDTF Sbjct: 314 DRIGVCTGIFRTDNVPVDDIVKLVDTF 340
>tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedeschia aethiopica GN=rca1 PE=2 SV=1 Length = 436
Score = 389 bits (999), Expect = e-107 Identities = 188/207 (90%), Positives = 198/207 (95%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI KNFMNLPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 94 YIAPAFMDKLVVHITKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 153
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+IRK GKMCCLFINDLDAGAGRMGGTTQYTVNNQMV Sbjct: 154 GELESGNAGEPAKLIRQRYREAADIIRK-GKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 212
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y K+E PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+ Sbjct: 213 NATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 272
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DR+GVC GIFR DNV +D+ K+VDTF Sbjct: 273 DRVGVCTGIFRSDNVPKEDVIKLVDTF 299
>tr|Q9ATC1|Q9ATC1_ZANAE Rubisco activase (Fragment) OS=Zantedeschia aethiopica GN=rca2 PE=2 SV=1 Length = 334
Score = 389 bits (999), Expect = e-107 Identities = 188/207 (90%), Positives = 198/207 (95%) Frame = +2
Query: 2 YIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 181 YIAPAFMDKLVVHI KNFMNLPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA Sbjct: 29 YIAPAFMDKLVVHITKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 88
Query: 182 GELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 361 GELESGNAGEPAKLIRQRYREAAD+IRK GKMCCLFINDLDAGAGRMGGTTQYTVNNQMV Sbjct: 89 GELESGNAGEPAKLIRQRYREAADIIRK-GKMCCLFINDLDAGAGRMGGTTQYTVNNQMV 147
Query: 362 NATLMNIADNPTNVQLPGVYIKEELPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE 541 NATLMNIADNPTNVQLPG+Y K+E PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+ Sbjct: 148 NATLMNIADNPTNVQLPGMYNKQENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 207
Query: 542 DRIGVCLGIFRHDNVKDDDITKIVDTF 622 DR+GVC GIFR DNV +D+ K+VDTF Sbjct: 208 DRVGVCTGIFRSDNVPKEDVIKLVDTF 234
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