DK952344
Clone id TST38A01NGRL0013_N10
Library
Length 553
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_N10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GTGATTGTACGCAGTATTCAGTATGGCCATCTCCATAGCCGCTTCCTCGGCAGTTGTCGC
TCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTGGTCTCAAGGCCACTAC
CCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAATGGCAGCCGTGTGAGCGC
CATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCC
TTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCC
TTGCATTGAGTTCGACAAATTGTGGGCGGATCATGTGCAGATCGGGAGCGTGTACCGAGA
GCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCAT
GTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTA
TCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCGG
CTTCCTTGTCCAG
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 159
Score (bit) 181.0
E-value 3.0e-45
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952344|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_N10, 5'
(553 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 181 3e-45
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 178 1e-44
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 175 2e-43
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 175 2e-43
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 174 2e-43
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 174 3e-43
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 173 4e-43
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 173 4e-43
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 173 4e-43
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 172 1e-42
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 172 1e-42
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 172 1e-42
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 171 2e-42
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 171 3e-42
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 171 3e-42
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 171 3e-42
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai... 170 4e-42
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 170 5e-42
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 169 8e-42
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 169 8e-42
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 169 8e-42
sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha... 169 8e-42
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha... 169 8e-42
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai... 169 1e-41
sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain... 169 1e-41
sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain... 169 1e-41
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha... 169 1e-41
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha... 168 1e-41
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai... 167 2e-41
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 167 2e-41

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 181 bits (458), Expect = 3e-45
Identities = 86/159 (54%), Positives = 109/159 (68%), Gaps = 4/159 (2%)
Frame = +2

Query: 86 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 253
L+ F+GLK+ F K+ N + SNG RV M VW P KK+ETLSYLPPLS E
Sbjct: 22 LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 254 QIAKQVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQ 433
++K++D+++R W PC+EF+ ++ G VYREH H GYYDGRYW MWKLPMFGC
Sbjct: 82 ALSKEIDYLIRNKWIPCLEFE------LEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCT 135

Query: 434 DAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
D+A V++E+ EC KEYP AFIRV+GFD RQVQ F+V
Sbjct: 136 DSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIV 174


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 178 bits (452), Expect = 1e-44
Identities = 87/154 (56%), Positives = 109/154 (70%), Gaps = 4/154 (2%)
Frame = +2

Query: 98 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 265
F+ LK+T+ F K+ N + SNG RV M VW P KKFETLSYLPPLSSEQ+AK
Sbjct: 28 FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 266 QVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 445
+VD+++RK PC+EF+ ++ G VYREH GYYDGRYW MWKLPMFGC D++
Sbjct: 88 EVDYLLRKNLIPCLEFE------LEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQ 141

Query: 446 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
VL+E+ EC K YP AFIR++GFD KRQVQ+ F+
Sbjct: 142 VLKELEECKKAYPSAFIRIIGFDNKRQVQIISFI 175


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
Length = 178

Score = 175 bits (443), Expect = 2e-43
Identities = 84/157 (53%), Positives = 111/157 (70%), Gaps = 3/157 (1%)
Frame = +2

Query: 86 LSKSFSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQ 256
L+ F+GLK++ F K N + SNGSRV+ M VW P KKFETLSYLPPL+ EQ
Sbjct: 21 LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 257 IAKQVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQD 436
+ K+V++++RKGW PC+EF+ ++ G V+R++ GYYDGRYW MW+LP+FG D
Sbjct: 81 LLKEVEYLLRKGWVPCVEFE------LEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTD 134

Query: 437 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
AA VL+E+AEC EYPEAFIR++GFD RQVQ F+
Sbjct: 135 AAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFI 171


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
Length = 180

Score = 175 bits (443), Expect = 2e-43
Identities = 83/153 (54%), Positives = 104/153 (67%), Gaps = 3/153 (1%)
Frame = +2

Query: 98 FSGLKATTLFAPKSPNP---LAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 268
F+GLK+T F N SNG RV M VW + K++ETLSYLPPL+++Q+A+Q
Sbjct: 27 FTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQ 86

Query: 269 VDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 448
VD+++ W PC+EF+ DH G VYREH + GYYDGRYW MWKLPMFGC D A V
Sbjct: 87 VDYLLNNKWVPCLEFE---TDH---GFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQV 140

Query: 449 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
L E+ EC KEYP AFIR++GFD+ RQVQ F+
Sbjct: 141 LNELEECKKEYPNAFIRIIGFDSNRQVQCVSFI 173


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
PE=1 SV=2
Length = 180

Score = 174 bits (442), Expect = 2e-43
Identities = 82/154 (53%), Positives = 107/154 (69%), Gaps = 4/154 (2%)
Frame = +2

Query: 98 FSGLKATTLFAP--KSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 265
F+GLK++ F K+ N + SNG RV+ M VW P KKFETLSYLP L+ ++AK
Sbjct: 24 FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 266 QVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 445
+VD+++R W PC+EF+ ++ G VYREH + GYYDGRYW MWKLP+FGC D+A
Sbjct: 84 EVDYLIRNKWIPCVEFE------LEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQ 137

Query: 446 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
VL+E+ EC KEYP AFIR++GFD RQVQ F+
Sbjct: 138 VLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFI 171


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
Length = 183

Score = 174 bits (440), Expect = 3e-43
Identities = 84/153 (54%), Positives = 109/153 (71%), Gaps = 3/153 (1%)
Frame = +2

Query: 98 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 268
F+GLK+++ F KS + +I SNG RV M VW P KKFETLSYLPPLSSE +AK+
Sbjct: 30 FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 269 VDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 448
VD+++RK W PC+EF+ ++ G VYRE+ GYYDGRYW MWKLPMFGC D++ V
Sbjct: 90 VDYLLRKNWVPCLEFE------LETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQV 143

Query: 449 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
L+E+ E K YP++FIR++GFD RQVQ F+
Sbjct: 144 LKELEEAKKAYPQSFIRIIGFDNVRQVQCISFI 176


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
Length = 178

Score = 173 bits (439), Expect = 4e-43
Identities = 83/153 (54%), Positives = 107/153 (69%), Gaps = 3/153 (1%)
Frame = +2

Query: 98 FSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 268
F+GLK+ F K N + SNG RV M VW P KK+ETLSYLPPL+ Q+AK+
Sbjct: 25 FTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKE 84

Query: 269 VDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 448
VD+++RK W PC+EF+ ++ G VYRE+ GYYDGRYW MWKLPMFGC D+A V
Sbjct: 85 VDYLLRKKWVPCLEFE------LEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQV 138

Query: 449 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
++E+AEC KEYP+A+IR++GFD RQVQ F+
Sbjct: 139 MKELAECKKEYPQAWIRIIGFDNVRQVQCIMFI 171


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
Length = 187

Score = 173 bits (439), Expect = 4e-43
Identities = 82/155 (52%), Positives = 103/155 (66%), Gaps = 4/155 (2%)
Frame = +2

Query: 95 SFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 262
SF+GLK+ F L I SNG RV MLVW P + KK+ETLSYLP LS EQ+
Sbjct: 25 SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 263 KQVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 442
K+++++++KGW PC+EF+ + G VYREH GYYDGRYW MWKLPMFGC DA
Sbjct: 85 KEIEYLLQKGWVPCLEFE------TEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDAT 138

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
VL E+ E K YP+A+IR++GFD RQVQ F+
Sbjct: 139 QVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISFI 173


>sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small chain
2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B
PE=2 SV=2
Length = 181

Score = 173 bits (439), Expect = 4e-43
Identities = 84/154 (54%), Positives = 107/154 (69%), Gaps = 4/154 (2%)
Frame = +2

Query: 98 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 265
F+GLK++ F K+ N + SNG RVS M VW P KKFETLSYLP LS ++AK
Sbjct: 24 FTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAK 83

Query: 266 QVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 445
+VD+++R W PC+EF+ ++ G VYREH + GYYDGRYW MWKLP+FGC D+A
Sbjct: 84 EVDYLLRNKWIPCVEFE------LEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQ 137

Query: 446 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
VL+E+ EC KEYP AFIR++GFD RQVQ F+
Sbjct: 138 VLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFI 171


>sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Medicago sativa PE=2 SV=1
Length = 180

Score = 172 bits (436), Expect = 1e-42
Identities = 80/154 (51%), Positives = 110/154 (71%), Gaps = 4/154 (2%)
Frame = +2

Query: 98 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 265
F+GLK++ F K+ N + SNG RV+ M VW P KKFETLSYLPPL+ EQ+AK
Sbjct: 26 FTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAK 85

Query: 266 QVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 445
+V++++RKGW PC+EF+ ++ G VYRE+ GYYDGRYW MW+LP+FG D++
Sbjct: 86 EVEYLIRKGWIPCLEFE------LEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQ 139

Query: 446 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
VL+E+A+C EYP++FIR++GFD RQVQ F+
Sbjct: 140 VLKELADCKAEYPDSFIRIIGFDNVRQVQCISFI 173


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 156
Score (bit) 276.0
E-value 7.0e-73
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952344|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_N10, 5'
(553 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 276 7e-73
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 193 5e-48
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 190 4e-47
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 189 7e-47
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 189 8e-47
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 189 8e-47
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 186 6e-46
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 184 4e-45
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 182 8e-45
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 182 8e-45
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 181 2e-44
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 181 2e-44
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 181 3e-44
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 180 4e-44
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 180 4e-44
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 180 5e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 179 7e-44
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 179 7e-44
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 179 9e-44
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c... 178 2e-43
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c... 177 3e-43
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 177 4e-43
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 176 7e-43
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 176 7e-43
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c... 175 2e-42
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 174 2e-42
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c... 173 5e-42
tr|B3H5S2|B3H5S2_ARATH Uncharacterized protein At5g38410.3 OS=Ar... 172 8e-42
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t... 172 8e-42
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c... 172 1e-41

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 276 bits (705), Expect = 7e-73
Identities = 131/156 (83%), Positives = 142/156 (91%)
Frame = +2

Query: 86 LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 265
LSKSFSGLKA TLFAPK NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22 LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 266 QVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 445
QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +
Sbjct: 82 QVEYMVRKGWTPCIEFD-------TIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGS 134

Query: 446 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 553
VLREIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+
Sbjct: 135 VLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVK 170


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 193 bits (491), Expect = 5e-48
Identities = 94/156 (60%), Positives = 113/156 (72%), Gaps = 3/156 (1%)
Frame = +2

Query: 92 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
K FSGLK+TTLFA K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 442
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A
Sbjct: 87 DFMIQQNLIPCIEFDT-------VGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSA 139

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
VLREI EC + +P ++RVLGFD+K+QVQ+ GFLV
Sbjct: 140 QVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLV 175


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 190 bits (483), Expect = 4e-47
Identities = 93/156 (59%), Positives = 112/156 (71%), Gaps = 3/156 (1%)
Frame = +2

Query: 92 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
K FSGLK+TTL A K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 442
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A
Sbjct: 87 DFMIQQNLIPCIEFDT-------VGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSA 139

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
VLREI EC + +P ++RVLGFD+K+QVQ+ GFLV
Sbjct: 140 QVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLV 175


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 189 bits (481), Expect = 7e-47
Identities = 91/156 (58%), Positives = 111/156 (71%), Gaps = 3/156 (1%)
Frame = +2

Query: 92 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
K+FSGLK+ TLF KS ++ NGSRV M VW P KFET SYLPPLS +QIA+QV
Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCQDAA 442
D+M+++ PCIEFD +G+V R +F GSG YYDGRYW MWKLPMFGC D++
Sbjct: 92 DYMIQQNLIPCIEFDT-------VGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSS 144

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
VLREI EC YP ++RVLGFD+K+QVQ+ GFLV
Sbjct: 145 QVLREIQECKTSYPSCWVRVLGFDSKKQVQICGFLV 180


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 189 bits (480), Expect = 8e-47
Identities = 90/156 (57%), Positives = 113/156 (72%), Gaps = 3/156 (1%)
Frame = +2

Query: 92 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
K+FSGLK+ TLF+ K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 442
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++
Sbjct: 122 DYMIQQNLIPCIEFDT-------VGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 174

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
VLREI EC ++P ++RVLGFD+K+QVQ+ GFLV
Sbjct: 175 QVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLV 210


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 189 bits (480), Expect = 8e-47
Identities = 91/156 (58%), Positives = 112/156 (71%), Gaps = 3/156 (1%)
Frame = +2

Query: 92 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
K+FSGLK TLF+ K+ A+ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 442
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++
Sbjct: 92 DYMIQQNLIPCIEFDT-------VGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 144

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
VLREI EC ++P ++RVLGFD+K+QVQ+ GFLV
Sbjct: 145 QVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLV 180


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 186 bits (473), Expect = 6e-46
Identities = 88/156 (56%), Positives = 113/156 (72%), Gaps = 3/156 (1%)
Frame = +2

Query: 92 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
K+FSGLK+ TLF+ ++ ++ NGSRV M VW P KFET SYLPPL+ ++IAKQV
Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 442
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++
Sbjct: 91 DYMIQQNLIPCIEFDT-------VGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 143

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
VLREI EC ++P ++RVLGFD+K+QVQ+ GFLV
Sbjct: 144 QVLREIQECKTQFPSCWVRVLGFDSKKQVQICGFLV 179


>tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_168764 PE=3 SV=1
Length = 182

Score = 184 bits (466), Expect = 4e-45
Identities = 87/153 (56%), Positives = 108/153 (70%)
Frame = +2

Query: 92 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
K+FSGLK+ TLFA K+ + ++ NGSRV M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSNTLFASKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDSIAKQV 91

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 451
++M+++G PC+EFD V V R + GYYDGRYW MWKLPMFGCQD++ VL
Sbjct: 92 EYMIQQGLIPCLEFD------VNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSSQVL 145

Query: 452 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
REI EC K +P F+R+LGFD +QVQ+ GFLV
Sbjct: 146 REIEECKKTFPGCFVRILGFDNVKQVQICGFLV 178


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
chain OS=Lactuca sativa PE=2 SV=1
Length = 181

Score = 182 bits (463), Expect = 8e-45
Identities = 86/159 (54%), Positives = 110/159 (69%), Gaps = 4/159 (2%)
Frame = +2

Query: 86 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 253
L+ F+GLK+ F K+ N + SNG RV M VW P KK+ETLSYLPPLS E
Sbjct: 22 LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 254 QIAKQVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQ 433
++K++D+++R W PC+EF+ ++ G VYREH H GYYDGRYW MWKLPMFGC
Sbjct: 82 ALSKEIDYLIRNKWVPCLEFE------LEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCT 135

Query: 434 DAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ F+V
Sbjct: 136 DSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIV 174


>tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_233894 PE=3 SV=1
Length = 182

Score = 182 bits (463), Expect = 8e-45
Identities = 88/153 (57%), Positives = 107/153 (69%)
Frame = +2

Query: 92 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
K+FSGLK+TTLF+ K+ ++ NGSRV M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSTTLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 451
++M+++ PC+EFD V V R + GYYDGRYW MWKLPMFGCQD+A VL
Sbjct: 92 EYMIQQKLIPCLEFD------VNANGVSRANNSSPGYYDGRYWTMWKLPMFGCQDSAQVL 145

Query: 452 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
REI EC K +P F+RVLGFD +QVQ+ GFLV
Sbjct: 146 REIEECKKTFPGCFVRVLGFDNVKQVQICGFLV 178