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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952344
Clone id TST38A01NGRL0013_N10
Library
Length 553
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_N10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GTGATTGTACGCAGTATTCAGTATGGCCATCTCCATAGCCGCTTCCTCGGCAGTTGTCGC
TCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTGGTCTCAAGGCCACTAC
CCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAATGGCAGCCGTGTGAGCGC
CATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCC
TTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCC
TTGCATTGAGTTCGACAAATTGTGGGCGGATCATGTGCAGATCGGGAGCGTGTACCGAGA
GCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCAT
GTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTA
TCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCGG
CTTCCTTGTCCAG
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 159
Score (bit) 181.0
E-value 3.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952344|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_N10, 5'
         (553 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   181   3e-45
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   178   1e-44
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   175   2e-43
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   175   2e-43
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   174   2e-43
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   174   3e-43
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   173   4e-43
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   173   4e-43
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   173   4e-43
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   172   1e-42
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   172   1e-42
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   172   1e-42
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   171   2e-42
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   171   3e-42
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   171   3e-42
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   171   3e-42
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   170   4e-42
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   170   5e-42
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   169   8e-42
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   169   8e-42
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   169   8e-42
sp|P27985|RBS2_BRANA Ribulose bisphosphate carboxylase small cha...   169   8e-42
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha...   169   8e-42
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   169   1e-41
sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain...   169   1e-41
sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain...   169   1e-41
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   169   1e-41
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha...   168   1e-41
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai...   167   2e-41
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   167   2e-41

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  181 bits (458), Expect = 3e-45
 Identities = 86/159 (54%), Positives = 109/159 (68%), Gaps = 4/159 (2%)
 Frame = +2

Query: 86  LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 253
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 254 QIAKQVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQ 433
            ++K++D+++R  W PC+EF+      ++ G VYREH H  GYYDGRYW MWKLPMFGC 
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFE------LEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCT 135

Query: 434 DAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
           D+A V++E+ EC KEYP AFIRV+GFD  RQVQ   F+V
Sbjct: 136 DSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIV 174


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  178 bits (452), Expect = 1e-44
 Identities = 87/154 (56%), Positives = 109/154 (70%), Gaps = 4/154 (2%)
 Frame = +2

Query: 98  FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 265
           F+ LK+T+ F    K+ N +    SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK
Sbjct: 28  FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 266 QVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 445
           +VD+++RK   PC+EF+      ++ G VYREH    GYYDGRYW MWKLPMFGC D++ 
Sbjct: 88  EVDYLLRKNLIPCLEFE------LEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQ 141

Query: 446 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
           VL+E+ EC K YP AFIR++GFD KRQVQ+  F+
Sbjct: 142 VLKELEECKKAYPSAFIRIIGFDNKRQVQIISFI 175


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  175 bits (443), Expect = 2e-43
 Identities = 84/157 (53%), Positives = 111/157 (70%), Gaps = 3/157 (1%)
 Frame = +2

Query: 86  LSKSFSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQ 256
           L+  F+GLK++  F   K  N +    SNGSRV+ M VW P   KKFETLSYLPPL+ EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 257 IAKQVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQD 436
           + K+V++++RKGW PC+EF+      ++ G V+R++    GYYDGRYW MW+LP+FG  D
Sbjct: 81  LLKEVEYLLRKGWVPCVEFE------LEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTD 134

Query: 437 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
           AA VL+E+AEC  EYPEAFIR++GFD  RQVQ   F+
Sbjct: 135 AAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFI 171


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score =  175 bits (443), Expect = 2e-43
 Identities = 83/153 (54%), Positives = 104/153 (67%), Gaps = 3/153 (1%)
 Frame = +2

Query: 98  FSGLKATTLFAPKSPNP---LAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 268
           F+GLK+T  F     N       SNG RV  M VW   + K++ETLSYLPPL+++Q+A+Q
Sbjct: 27  FTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQ 86

Query: 269 VDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 448
           VD+++   W PC+EF+    DH   G VYREH +  GYYDGRYW MWKLPMFGC D A V
Sbjct: 87  VDYLLNNKWVPCLEFE---TDH---GFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQV 140

Query: 449 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
           L E+ EC KEYP AFIR++GFD+ RQVQ   F+
Sbjct: 141 LNELEECKKEYPNAFIRIIGFDSNRQVQCVSFI 173


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  174 bits (442), Expect = 2e-43
 Identities = 82/154 (53%), Positives = 107/154 (69%), Gaps = 4/154 (2%)
 Frame = +2

Query: 98  FSGLKATTLFAP--KSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 265
           F+GLK++  F    K+ N +    SNG RV+ M VW P   KKFETLSYLP L+  ++AK
Sbjct: 24  FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 266 QVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 445
           +VD+++R  W PC+EF+      ++ G VYREH +  GYYDGRYW MWKLP+FGC D+A 
Sbjct: 84  EVDYLIRNKWIPCVEFE------LEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQ 137

Query: 446 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
           VL+E+ EC KEYP AFIR++GFD  RQVQ   F+
Sbjct: 138 VLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFI 171


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  174 bits (440), Expect = 3e-43
 Identities = 84/153 (54%), Positives = 109/153 (71%), Gaps = 3/153 (1%)
 Frame = +2

Query: 98  FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 268
           F+GLK+++ F    KS +  +I SNG RV  M VW P   KKFETLSYLPPLSSE +AK+
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 269 VDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 448
           VD+++RK W PC+EF+      ++ G VYRE+    GYYDGRYW MWKLPMFGC D++ V
Sbjct: 90  VDYLLRKNWVPCLEFE------LETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQV 143

Query: 449 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
           L+E+ E  K YP++FIR++GFD  RQVQ   F+
Sbjct: 144 LKELEEAKKAYPQSFIRIIGFDNVRQVQCISFI 176


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  173 bits (439), Expect = 4e-43
 Identities = 83/153 (54%), Positives = 107/153 (69%), Gaps = 3/153 (1%)
 Frame = +2

Query: 98  FSGLKATTLF-APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 268
           F+GLK+   F   K  N  +   SNG RV  M VW P   KK+ETLSYLPPL+  Q+AK+
Sbjct: 25  FTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKE 84

Query: 269 VDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 448
           VD+++RK W PC+EF+      ++ G VYRE+    GYYDGRYW MWKLPMFGC D+A V
Sbjct: 85  VDYLLRKKWVPCLEFE------LEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQV 138

Query: 449 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
           ++E+AEC KEYP+A+IR++GFD  RQVQ   F+
Sbjct: 139 MKELAECKKEYPQAWIRIIGFDNVRQVQCIMFI 171


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  173 bits (439), Expect = 4e-43
 Identities = 82/155 (52%), Positives = 103/155 (66%), Gaps = 4/155 (2%)
 Frame = +2

Query: 95  SFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 262
           SF+GLK+   F       L I    SNG RV  MLVW P + KK+ETLSYLP LS EQ+ 
Sbjct: 25  SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 263 KQVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 442
           K+++++++KGW PC+EF+       + G VYREH    GYYDGRYW MWKLPMFGC DA 
Sbjct: 85  KEIEYLLQKGWVPCLEFE------TEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDAT 138

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
            VL E+ E  K YP+A+IR++GFD  RQVQ   F+
Sbjct: 139 QVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISFI 173


>sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small chain
           2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B
           PE=2 SV=2
          Length = 181

 Score =  173 bits (439), Expect = 4e-43
 Identities = 84/154 (54%), Positives = 107/154 (69%), Gaps = 4/154 (2%)
 Frame = +2

Query: 98  FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 265
           F+GLK++  F    K+ N +    SNG RVS M VW P   KKFETLSYLP LS  ++AK
Sbjct: 24  FTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAK 83

Query: 266 QVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 445
           +VD+++R  W PC+EF+      ++ G VYREH +  GYYDGRYW MWKLP+FGC D+A 
Sbjct: 84  EVDYLLRNKWIPCVEFE------LEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQ 137

Query: 446 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
           VL+E+ EC KEYP AFIR++GFD  RQVQ   F+
Sbjct: 138 VLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFI 171


>sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Medicago sativa PE=2 SV=1
          Length = 180

 Score =  172 bits (436), Expect = 1e-42
 Identities = 80/154 (51%), Positives = 110/154 (71%), Gaps = 4/154 (2%)
 Frame = +2

Query: 98  FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 265
           F+GLK++  F    K+ N +    SNG RV+ M VW P   KKFETLSYLPPL+ EQ+AK
Sbjct: 26  FTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAK 85

Query: 266 QVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 445
           +V++++RKGW PC+EF+      ++ G VYRE+    GYYDGRYW MW+LP+FG  D++ 
Sbjct: 86  EVEYLIRKGWIPCLEFE------LEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQ 139

Query: 446 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFL 547
           VL+E+A+C  EYP++FIR++GFD  RQVQ   F+
Sbjct: 140 VLKELADCKAEYPDSFIRIIGFDNVRQVQCISFI 173
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 156
Score (bit) 276.0
E-value 7.0e-73
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952344|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_N10, 5'
         (553 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   276   7e-73
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   193   5e-48
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   190   4e-47
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   189   7e-47
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   189   8e-47
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   189   8e-47
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   186   6e-46
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   184   4e-45
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   182   8e-45
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   182   8e-45
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   181   2e-44
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   181   3e-44
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   180   4e-44
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   180   4e-44
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   180   5e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   179   7e-44
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   179   7e-44
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   179   9e-44
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   177   4e-43
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   176   7e-43
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   176   7e-43
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c...   175   2e-42
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   173   5e-42
tr|B3H5S2|B3H5S2_ARATH Uncharacterized protein At5g38410.3 OS=Ar...   172   8e-42
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   172   8e-42
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   172   1e-41

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  276 bits (705), Expect = 7e-73
 Identities = 131/156 (83%), Positives = 142/156 (91%)
 Frame = +2

Query: 86  LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 265
           LSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 266 QVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAA 445
           QV++MVRKGWTPCIEFD        IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +
Sbjct: 82  QVEYMVRKGWTPCIEFD-------TIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGS 134

Query: 446 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQ 553
           VLREIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+
Sbjct: 135 VLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVK 170


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  193 bits (491), Expect = 5e-48
 Identities = 94/156 (60%), Positives = 113/156 (72%), Gaps = 3/156 (1%)
 Frame = +2

Query: 92  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
           K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 442
           DFM+++   PCIEFD        +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A
Sbjct: 87  DFMIQQNLIPCIEFDT-------VGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSA 139

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
            VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 140 QVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLV 175


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  190 bits (483), Expect = 4e-47
 Identities = 93/156 (59%), Positives = 112/156 (71%), Gaps = 3/156 (1%)
 Frame = +2

Query: 92  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 442
           DFM+++   PCIEFD        +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A
Sbjct: 87  DFMIQQNLIPCIEFDT-------VGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSA 139

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
            VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 140 QVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLV 175


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  189 bits (481), Expect = 7e-47
 Identities = 91/156 (58%), Positives = 111/156 (71%), Gaps = 3/156 (1%)
 Frame = +2

Query: 92  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCQDAA 442
           D+M+++   PCIEFD        +G+V R +F GSG   YYDGRYW MWKLPMFGC D++
Sbjct: 92  DYMIQQNLIPCIEFDT-------VGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSS 144

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
            VLREI EC   YP  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 145 QVLREIQECKTSYPSCWVRVLGFDSKKQVQICGFLV 180


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  189 bits (480), Expect = 8e-47
 Identities = 90/156 (57%), Positives = 113/156 (72%), Gaps = 3/156 (1%)
 Frame = +2

Query: 92  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
           K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 442
           D+M+++   PCIEFD        +GSV R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 122 DYMIQQNLIPCIEFDT-------VGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 174

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
            VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 175 QVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLV 210


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  189 bits (480), Expect = 8e-47
 Identities = 91/156 (58%), Positives = 112/156 (71%), Gaps = 3/156 (1%)
 Frame = +2

Query: 92  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 442
           D+M+++   PCIEFD        +GSV R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 92  DYMIQQNLIPCIEFDT-------VGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 144

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
            VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 145 QVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLV 180


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  186 bits (473), Expect = 6e-46
 Identities = 88/156 (56%), Positives = 113/156 (72%), Gaps = 3/156 (1%)
 Frame = +2

Query: 92  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 442
           D+M+++   PCIEFD        +GSV R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 91  DYMIQQNLIPCIEFDT-------VGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 143

Query: 443 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
            VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV
Sbjct: 144 QVLREIQECKTQFPSCWVRVLGFDSKKQVQICGFLV 179


>tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_168764 PE=3 SV=1
          Length = 182

 Score =  184 bits (466), Expect = 4e-45
 Identities = 87/153 (56%), Positives = 108/153 (70%)
 Frame = +2

Query: 92  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
           K+FSGLK+ TLFA K+ +  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSNTLFASKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDSIAKQV 91

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 451
           ++M+++G  PC+EFD      V    V R +    GYYDGRYW MWKLPMFGCQD++ VL
Sbjct: 92  EYMIQQGLIPCLEFD------VNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSSQVL 145

Query: 452 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
           REI EC K +P  F+R+LGFD  +QVQ+ GFLV
Sbjct: 146 REIEECKKTFPGCFVRILGFDNVKQVQICGFLV 178


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  182 bits (463), Expect = 8e-45
 Identities = 86/159 (54%), Positives = 110/159 (69%), Gaps = 4/159 (2%)
 Frame = +2

Query: 86  LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 253
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 254 QIAKQVDFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQ 433
            ++K++D+++R  W PC+EF+      ++ G VYREH H  GYYDGRYW MWKLPMFGC 
Sbjct: 82  ALSKEIDYLIRNKWVPCLEFE------LEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCT 135

Query: 434 DAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
           D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V
Sbjct: 136 DSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIV 174


>tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_233894 PE=3 SV=1
          Length = 182

 Score =  182 bits (463), Expect = 8e-45
 Identities = 88/153 (57%), Positives = 107/153 (69%)
 Frame = +2

Query: 92  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 271
           K+FSGLK+TTLF+ K+    ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSTTLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 272 DFMVRKGWTPCIEFDKLWADHVQIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 451
           ++M+++   PC+EFD      V    V R +    GYYDGRYW MWKLPMFGCQD+A VL
Sbjct: 92  EYMIQQKLIPCLEFD------VNANGVSRANNSSPGYYDGRYWTMWKLPMFGCQDSAQVL 145

Query: 452 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLV 550
           REI EC K +P  F+RVLGFD  +QVQ+ GFLV
Sbjct: 146 REIEECKKTFPGCFVRVLGFDNVKQVQICGFLV 178