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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952345
Clone id TST38A01NGRL0013_N11
Library
Length 627
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_N11. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GGCTAAAACACCAACAGGTTTTGAACCAGGAAGAGCTGGATGATATCTTGAGATATGGAG
CTAAGGAGCTTTTTGCAGATGAAAATGATGAGAAAACAAAGTCCCAGCAAATTCACTATG
ATGATGCAGCCATCGACCGGCTTTTAGACAGATCTCAAGTTGAAGACGATGAAGTGGCTG
CGGATGAGGAAGACACTGATTTACTGAAAGCATTTAAGGTAGCAAACTTTGAGTATAAAG
AGGATGATGGGCCTAAAGAGGCAGAAGGCAGCGAAGATGCAAAAGAGTTGGACTCTGAAG
CAAAGGCTCAGTATTGGGATGATCTTTTGAAGCAGAGATATGAAGAGCAGCAACAACGTG
ATGCAGCTGCACAGCTTGGCAAAGGCAAACGAGCTCGCAGACAGGTCTTTGCATCAGGAG
AGGATGATCTTGCTGGTATGGCTAGCGTTAGCTCAGATGACGAAGATGAAGAGCCTGCTG
CCGAGACCATTGCACCAGAAGCTGTGAAAGAGATTCCTGATGGGTTTGAAAGAAGGCCCT
CGATGCCCAAAAAGAAGCCTAGAGTCGATTCGTCCGAGCCAGCAGGCCCTCCACCTCTCA
TACATGGAGAGGGGAAATCATTGAAAA
■■Homology search results ■■ -
sp_hit_id Q9S775
Definition sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana
Align length 209
Score (bit) 132.0
E-value 1.0e-30
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952345|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_N11, 5'
         (627 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE...   132   1e-30
sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4...    98   4e-20
sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4...    98   4e-20
sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3...    96   1e-19
sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3...    89   1e-17
sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein M...    84   6e-16
sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5...    84   8e-16
sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3...    70   9e-12
sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1...    56   2e-07
sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1...    56   2e-07
sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2...    45   3e-04
sp|Q92688|AN32B_HUMAN Acidic leucine-rich nuclear phosphoprotein...    37   0.083
sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosacchar...    35   0.41 
sp|Q2S030|DNAJ_SALRD Chaperone protein dnaJ OS=Salinibacter rube...    34   0.54 
sp|Q3SZC6|AN32B_BOVIN Acidic leucine-rich nuclear phosphoprotein...    34   0.54 
sp|Q5AHI7|NOP12_CANAL Nucleolar protein 12 OS=Candida albicans G...    34   0.70 
sp|Q4WMI1|BFR2_ASPFU Protein bfr2 OS=Aspergillus fumigatus GN=bf...    34   0.70 
sp|Q9P6V8|SPB1_NEUCR AdoMet-dependent rRNA methyltransferase spb...    33   0.92 
sp|Q3V1V3|ESF1_MOUSE ESF1 homolog OS=Mus musculus GN=Esf1 PE=1 SV=1    32   2.0  
sp|Q9EST6|AN32B_RAT Acidic leucine-rich nuclear phosphoprotein 3...    32   2.0  
sp|Q9EST5|AN32B_MOUSE Acidic leucine-rich nuclear phosphoprotein...    32   2.0  
sp|Q9VM95|AATF_DROME Protein AATF-like OS=Drosophila melanogaste...    32   2.0  
sp|Q6IPT4|NB5R5_HUMAN Probable NADH-cytochrome b5 reductase FLJ0...    32   2.1  
sp|Q10209|YAY1_SCHPO Uncharacterized J domain-containing protein...    32   2.7  
sp|Q6PAX2|ATD3B_XENLA ATPase family AAA domain-containing protei...    32   2.7  
sp|Q58E76|ATD3A_XENLA ATPase family AAA domain-containing protei...    32   2.7  
sp|Q6NVR9|ATAD3_XENTR ATPase family AAA domain-containing protei...    32   2.7  
sp|Q3MC88|GLMU_ANAVT Bifunctional protein glmU OS=Anabaena varia...    32   2.7  
sp|Q0KF69|HSLU_RALEH ATP-dependent hsl protease ATP-binding subu...    31   4.5  
sp|Q6P9F0|CCD62_HUMAN Coiled-coil domain-containing protein 60 O...    31   4.5  

>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE
            OS=Arabidopsis thaliana GN=PKL PE=1 SV=1
          Length = 1384

 Score =  132 bits (333), Expect = 1e-30
 Identities = 85/209 (40%), Positives = 114/209 (54%), Gaps = 5/209 (2%)
 Frame = +3

Query: 15   QVLNQEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXX 194
            Q +NQEELDDI+RYG+KELFA E+DE  KS +IHYDDAAID+LLDR              
Sbjct: 750  QNINQEELDDIIRYGSKELFASEDDEAGKSGKIHYDDAAIDKLLDRDLVEAEEVSVDDEE 809

Query: 195  TD-LLKAFKVANFEYKEDDGPKEAEGSEDAKELDSEA----KAQYWDDLLKQRYEEQQQR 359
             +  LKAFKVANFEY +++     E    A E  S A    +A YW++LLK ++E  Q  
Sbjct: 810  ENGFLKAFKVANFEYIDENEAAALEAQRVAAESKSSAGNSDRASYWEELLKDKFELHQAE 869

Query: 360  DAAAQLGKGKRARRQVFASGEDDLAGMXXXXXXXXXXXXXXXXXXXXXXKEIPDGFERRP 539
            +  A LGK KR+R+Q+ +  EDDLAG+                      + +  G  RRP
Sbjct: 870  ELNA-LGKRKRSRKQLVSIEEDDLAGLEDVSSDGDESYEAESTDGEAAGQGVQTG--RRP 926

Query: 540  SMPKKKPRVDSSEPAGPPPLIHGEGKSLK 626
               K +  ++      P PL+ GEG+S +
Sbjct: 927  YRRKGRDNLE------PTPLMEGEGRSFR 949


>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4
            OS=Mus musculus GN=Chd4 PE=1 SV=1
          Length = 1915

 Score = 97.8 bits (242), Expect = 4e-20
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
 Frame = +3

Query: 21   LNQEELDDILRYGAKELFADE-------NDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXX 179
            ++++ELDDIL++G +ELF DE       N E   S  IHYDD AI+RLLDR+Q       
Sbjct: 1203 MSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTE 1262

Query: 180  XXXXXTDLLKAFKVANFEYKEDDGPKEAEGSEDAKELDSEAKAQYWDDLLKQRYEEQQQR 359
                  + L +FKVA +  +E++  +E E   +  + +      YW+ LL+  Y EQQQ 
Sbjct: 1263 LQGM-NEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHY-EQQQE 1320

Query: 360  DAAAQLGKGKRARRQV 407
            D A  LGKGKR R+QV
Sbjct: 1321 DLARNLGKGKRIRKQV 1336


>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4
            OS=Homo sapiens GN=CHD4 PE=1 SV=1
          Length = 1912

 Score = 97.8 bits (242), Expect = 4e-20
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
 Frame = +3

Query: 21   LNQEELDDILRYGAKELFADE-------NDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXX 179
            ++++ELDDIL++G +ELF DE       N E   S  IHYDD AI+RLLDR+Q       
Sbjct: 1210 MSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTE 1269

Query: 180  XXXXXTDLLKAFKVANFEYKEDDGPKEAEGSEDAKELDSEAKAQYWDDLLKQRYEEQQQR 359
                  + L +FKVA +  +E++  +E E   +  + +      YW+ LL+  Y EQQQ 
Sbjct: 1270 LQGM-NEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHY-EQQQE 1327

Query: 360  DAAAQLGKGKRARRQV 407
            D A  LGKGKR R+QV
Sbjct: 1328 DLARNLGKGKRIRKQV 1343


>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3
            OS=Homo sapiens GN=CHD3 PE=1 SV=3
          Length = 2000

 Score = 96.3 bits (238), Expect = 1e-19
 Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
 Frame = +3

Query: 21   LNQEELDDILRYGAKELFADENDEKTK---SQQIHYDDAAIDRLLDRSQXXXXXXXXXXX 191
            ++++ELDDIL++G +ELF DEN+ + K   S  IHYD+ AI RLLDR+Q           
Sbjct: 1220 MSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQ-DATEDTDVQN 1278

Query: 192  XTDLLKAFKVANFEYKEDDGPKEAEGSEDAKELDSEAKAQYWDDLLKQRYEEQQQRDAAA 371
              + L +FKVA +  +E+D  +E E   +  + +      YW+ LL+  Y EQQQ D A 
Sbjct: 1279 MNEYLSSFKVAQYVVREEDKIEEIE--REIIKQEENVDPDYWEKLLRHHY-EQQQEDLAR 1335

Query: 372  QLGKGKRARRQV 407
             LGKGKR R+QV
Sbjct: 1336 NLGKGKRVRKQV 1347


>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3
            homolog OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
          Length = 1787

 Score = 89.4 bits (220), Expect = 1e-17
 Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 15/155 (9%)
 Frame = +3

Query: 6    KHQQVLNQEELDDILRYGAKELFADE------------NDEKTKSQQIHYDDAAIDRLLD 149
            K  + +++ ELDD+LR+G +ELF +E            + +K   Q+I +DDAA+D LLD
Sbjct: 1096 KDGKSMSKTELDDVLRWGTEELFKEEEAPVEGADGEGTSSKKPNEQEIVWDDAAVDFLLD 1155

Query: 150  RS--QXXXXXXXXXXXXTDLLKAFKVANFEYKE-DDGPKEAEGSEDAKELDSEAKAQYWD 320
            R+  +             + L +FKVA +  KE DD   + + +E  KE   E    YW+
Sbjct: 1156 RNKEEEGQDGEKKEHWTNEYLSSFKVATYNTKEADDADDDEDETEVIKEGTEEQDPNYWE 1215

Query: 321  DLLKQRYEEQQQRDAAAQLGKGKRARRQVFASGED 425
             LLK  YE+ Q+ +   +LGKGKR RRQV  + E+
Sbjct: 1216 KLLKHHYEQDQETELQ-KLGKGKRVRRQVNYASEN 1249


>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2
            homolog OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
          Length = 1982

 Score = 84.0 bits (206), Expect = 6e-16
 Identities = 50/127 (39%), Positives = 72/127 (56%)
 Frame = +3

Query: 27   QEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXXTDLL 206
            ++ELDDILR+G ++LF +++    K + IHYDD A+  LLDR+              + L
Sbjct: 1214 KQELDDILRFGTEDLFKEDD----KEEAIHYDDKAVAELLDRTNRGIEEKESWA--NEYL 1267

Query: 207  KAFKVANFEYKEDDGPKEAEGSEDAKELDSEAKAQYWDDLLKQRYEEQQQRDAAAQLGKG 386
             +FKVA++  KE++   E E +E  K+    +   YW  LL+  YE Q Q D    LGKG
Sbjct: 1268 SSFKVASYATKEEE---EEEETEIIKQDAENSDPAYWVKLLRHHYE-QHQEDVGRSLGKG 1323

Query: 387  KRARRQV 407
            KR R+QV
Sbjct: 1324 KRVRKQV 1330


>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5
            OS=Homo sapiens GN=CHD5 PE=2 SV=1
          Length = 1954

 Score = 83.6 bits (205), Expect = 8e-16
 Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 41/170 (24%)
 Frame = +3

Query: 21   LNQEELDDILRYGAKELFADE--------------------------------------- 83
            + ++ELDDIL++G +ELF D+                                       
Sbjct: 1184 MTKQELDDILKFGTEELFKDDVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPP 1243

Query: 84   --NDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXXTDLLKAFKVANFEYKEDDGPK 257
              N +   S  IHYDDAAI +LLDR+Q             + L +FKVA +  +E+DG +
Sbjct: 1244 GDNKDVEDSSVIHYDDAAISKLLDRNQ-DATDDTELQNMNEYLSSFKVAQYVVREEDGVE 1302

Query: 258  EAEGSEDAKELDSEAKAQYWDDLLKQRYEEQQQRDAAAQLGKGKRARRQV 407
            E E   +  + +      YW+ LL+  Y EQQQ D A  LGKGKR R+QV
Sbjct: 1303 EVE--REIIKQEENVDPDYWEKLLRHHY-EQQQEDLARNLGKGKRIRKQV 1349


>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3
            OS=Drosophila melanogaster GN=Chd3 PE=2 SV=3
          Length = 892

 Score = 70.1 bits (170), Expect = 9e-12
 Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 10/143 (6%)
 Frame = +3

Query: 24   NQEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXXTDL 203
            +++EL+DILR+G ++LF D      KS+ IHYDD A+  LLDR+              + 
Sbjct: 747  SKDELEDILRFGTEDLFKD-----GKSEAIHYDDKAVADLLDRTN--RGIEEKESWANEY 799

Query: 204  LKAFKVANFEYKEDDGPKEAEGSEDAKELDSEAKAQYWDDLL---------KQRYEEQQ- 353
            L +FKVA++  KED   +  + + DA+  D      YW++L+         KQ+ + QQ 
Sbjct: 800  LSSFKVASYATKEDH-EEHDDYNNDAENTD----PFYWENLMGKSQPKLPKKQKKQSQQS 854

Query: 354  QRDAAAQLGKGKRARRQVFASGE 422
            Q D  + +GKGKR R+++  S +
Sbjct: 855  QVDVESIMGKGKRIRKEIDYSNQ 877


>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1
            OS=Mus musculus GN=Chd1 PE=1 SV=2
          Length = 1711

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 21/156 (13%)
 Frame = +3

Query: 24   NQEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXXTDL 203
            N+EEL  IL++GA+ELF +   E+ + Q++      ID +L R++             +L
Sbjct: 959  NKEELSAILKFGAEELFKEPEGEEQEPQEMD-----IDEILKRAETHENEPGPLSVGDEL 1013

Query: 204  LKAFKVANFEYKEDDGPKEAEGSEDAKELDSEAKAQYWDDLL----KQRYEEQQQ----- 356
            L  FKVANF   +          ED  EL+ E  ++ W++++    ++R EE+++     
Sbjct: 1014 LSQFKVANFSNMD----------EDDIELEPERNSKNWEEIIPEEQRRRLEEEERQKELE 1063

Query: 357  --------RDAAAQL----GKGKRARRQVFASGEDD 428
                    R+ A Q+     +G+R+R + ++  + D
Sbjct: 1064 EIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSD 1099


>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1
            OS=Homo sapiens GN=CHD1 PE=1 SV=1
          Length = 1709

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 21/156 (13%)
 Frame = +3

Query: 24   NQEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXXTDL 203
            N+EEL  IL++GA+ELF +   E+ + Q++      ID +L R++             +L
Sbjct: 961  NKEELSAILKFGAEELFKEPEGEEQEPQEMD-----IDEILKRAETHENEPGPLTVGDEL 1015

Query: 204  LKAFKVANFEYKEDDGPKEAEGSEDAKELDSEAKAQYWDDLL----KQRYEEQQQ----- 356
            L  FKVANF   +          ED  EL+ E  ++ W++++    ++R EE+++     
Sbjct: 1016 LSQFKVANFSNMD----------EDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELE 1065

Query: 357  --------RDAAAQL----GKGKRARRQVFASGEDD 428
                    R+ A Q+     +G+R+R + ++  + D
Sbjct: 1066 EIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSD 1101
tr_hit_id A9TI22
Definition tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens
Align length 215
Score (bit) 140.0
E-value 5.0e-32
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952345|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_N11, 5'
         (627 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragmen...   140   5e-32
tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragmen...   140   8e-32
tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza...   139   2e-31
tr|Q6YNJ5|Q6YNJ5_ORYSI Chromatin-remodeling factor CHD3 OS=Oryza...   139   2e-31
tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza...   139   2e-31
tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza ...   139   2e-31
tr|B8B3I5|B8B3I5_ORYSI Putative uncharacterized protein OS=Oryza...   139   2e-31
tr|A3B915|A3B915_ORYSJ Putative uncharacterized protein OS=Oryza...   135   2e-30
tr|Q9SZ57|Q9SZ57_ARATH Putative uncharacterized protein AT4g3190...   120   5e-26
tr|A3KN93|A3KN93_XENTR Chd4 protein OS=Xenopus tropicalis GN=chd...    99   2e-19
tr|Q4T5L7|Q4T5L7_TETNG Chromosome undetermined SCAF9199, whole g...    98   5e-19
tr|Q99JM0|Q99JM0_MOUSE Chd4 protein (Fragment) OS=Mus musculus G...    98   5e-19
tr|Q5DTP7|Q5DTP7_MOUSE MKIAA4075 protein (Fragment) OS=Mus muscu...    98   5e-19
tr|Q5ISS3|Q5ISS3_MACFA Chromodomain helicase DNA-binding protein...    98   5e-19
tr|B3KY63|B3KY63_HUMAN cDNA FLJ16830 fis, clone UTERU3022536, hi...    98   5e-19
tr|Q7ZWN3|Q7ZWN3_XENLA B230399n07 protein OS=Xenopus laevis GN=c...    97   6e-19
tr|O73820|O73820_XENLA Mi-2 (Fragment) OS=Xenopus laevis PE=2 SV=1     97   6e-19
tr|Q4SNF1|Q4SNF1_TETNG Chromosome 8 SCAF14543, whole genome shot...    97   1e-18
tr|Q2KML1|Q2KML1_RAT Chromodomain helicase DNA-binding protein 3...    96   1e-18
tr|Q2KML0|Q2KML0_RAT Chromodomain helicase DNA-binding protein 3...    96   1e-18
tr|Q2KMK9|Q2KMK9_RAT Chromodomain helicase DNA-binding protein 3...    96   1e-18
tr|Q2KMK7|Q2KMK7_RAT Chromodomain helicase DNA-binding protein 3...    96   1e-18
tr|B1AR17|B1AR17_MOUSE Chromodomain helicase DNA binding protein...    96   1e-18
tr|B1AR16|B1AR16_MOUSE Chromodomain helicase DNA binding protein...    96   1e-18
tr|B4DLC6|B4DLC6_HUMAN cDNA FLJ59330, highly similar to Chromodo...    96   1e-18
tr|Q4T4E7|Q4T4E7_TETNG Chromosome undetermined SCAF9679, whole g...    96   2e-18
tr|Q4QRH1|Q4QRH1_DANRE Wu:fd12d03 protein (Fragment) OS=Danio re...    95   3e-18
tr|Q1LYP4|Q1LYP4_DANRE Novel protein similar to vertebrate chrom...    94   5e-18
tr|B6LX92|B6LX92_BRAFL Putative uncharacterized protein (Fragmen...    92   2e-17
tr|Q19815|Q19815_CAEEL Lethal protein 418 (LET-418) OS=Caenorhab...    89   2e-16

>tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragment)
            OS=Physcomitrella patens subsp. patens GN=CHR1504 PE=4
            SV=1
          Length = 1245

 Score =  140 bits (354), Expect = 5e-32
 Identities = 97/215 (45%), Positives = 121/215 (56%), Gaps = 13/215 (6%)
 Frame = +3

Query: 21   LNQEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQ-XXXXXXXXXXXXT 197
            +NQEELDDILRYGA ELF+ E DE  K++QIHYDD+AIDRLLDR+Q             +
Sbjct: 775  INQEELDDILRYGAMELFS-EKDEDGKTRQIHYDDSAIDRLLDRAQVNDEEEKADDEEDS 833

Query: 198  DLLKAFKVANFEY-KEDD----GPKEAEGSEDAK---ELDSEAKAQYWDDLLKQRYEEQQ 353
            DLLKAFKVANF+Y  E+D      +EAE    AK   E++ + +AQ+WD+LLK R  EQQ
Sbjct: 834  DLLKAFKVANFDYINEEDAAAAAAEEAEKEARAKLEAEMEGQGRAQFWDNLLKDRVVEQQ 893

Query: 354  QRDAAAQLGKGKRARRQV--FASGEDDLAGMXXXXXXXXXXXXXXXXXXXXXXKEI--PD 521
              +   +LGKGKR+RRQV    S EDDLAGM                           P 
Sbjct: 894  VEE-FEELGKGKRSRRQVPGLYSQEDDLAGMVEVNSDDGQEPEWAPTTDADSPGSFGEPG 952

Query: 522  GFERRPSMPKKKPRVDSSEPAGPPPLIHGEGKSLK 626
                   +P  + R  + E   PPPLI GEG+ L+
Sbjct: 953  EVSGSKKLPSSRKRRMTGE---PPPLIEGEGRELR 984


>tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragment)
            OS=Physcomitrella patens subsp. patens GN=CHR1512 PE=4
            SV=1
          Length = 1220

 Score =  140 bits (352), Expect = 8e-32
 Identities = 95/214 (44%), Positives = 117/214 (54%), Gaps = 12/214 (5%)
 Frame = +3

Query: 21   LNQEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQ-XXXXXXXXXXXXT 197
            +NQEELDDILRYGA ELF+ E DE  K++QIHYDDAAIDRLLDR+Q             +
Sbjct: 775  INQEELDDILRYGAMELFS-EKDEDGKTRQIHYDDAAIDRLLDRAQVNDEEEKADDEEDS 833

Query: 198  DLLKAFKVANFEYKEDD-----GPKEAEGSEDAK---ELDSEAKAQYWDDLLKQRYEEQQ 353
            DLLKAFKVANF+Y  D+       +EAE    AK   E++ + +AQ+WD LLK R  EQQ
Sbjct: 834  DLLKAFKVANFDYINDEDAAAAAAEEAEREARAKLEAEMEGQGRAQFWDSLLKDRVVEQQ 893

Query: 354  QRDAAAQLGKGKRARRQV---FASGEDDLAGMXXXXXXXXXXXXXXXXXXXXXXKEIPDG 524
              +   +LGKGKR+RRQV     S EDDLAGM                      +  P  
Sbjct: 894  VEE-FEELGKGKRSRRQVVPGLYSQEDDLAGM-----------AEMNSDDGQEPEWAPTA 941

Query: 525  FERRPSMPKKKPRVDSSEPAGPPPLIHGEGKSLK 626
                P    +   V       PPPL+ GEG+ L+
Sbjct: 942  DADSPGSNGEVGEVSERMTGEPPPLMEGEGRELR 975


>tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza
            sativa GN=PKL PE=2 SV=1
          Length = 1360

 Score =  139 bits (349), Expect = 2e-31
 Identities = 84/204 (41%), Positives = 112/204 (54%), Gaps = 4/204 (1%)
 Frame = +3

Query: 27   QEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXXTDLL 206
            QEELDDI+R+G+KELF DENDE  KS QIHYDDAAIDRLLDR Q             + L
Sbjct: 768  QEELDDIIRHGSKELFDDENDEAGKSCQIHYDDAAIDRLLDRDQADGEEPVEDEEEDEFL 827

Query: 207  KAFKVANFEYKEDDGPKEAEGSEDAKELDSEA----KAQYWDDLLKQRYEEQQQRDAAAQ 374
            K FKVANFEY ++     A+  E  K+ ++EA    +A +WD LLK RY+ Q+  +    
Sbjct: 828  KGFKVANFEYIDEAKALAAKEEEARKKAEAEAANSDRANFWDKLLKDRYDVQKVEEHTT- 886

Query: 375  LGKGKRARRQVFASGEDDLAGMXXXXXXXXXXXXXXXXXXXXXXKEIPDGFERRPSMPKK 554
            +GKGKR+R+Q+ A+ EDD+ G+                       +      R P   KK
Sbjct: 887  MGKGKRSRKQMAAADEDDITGLHDMSSEDDDYSYDDDVSDNDTSLQSGLAGRRGPYSKKK 946

Query: 555  KPRVDSSEPAGPPPLIHGEGKSLK 626
            +  VDS       P + GEG++L+
Sbjct: 947  QRNVDSL------PFMEGEGRALR 964


>tr|Q6YNJ5|Q6YNJ5_ORYSI Chromatin-remodeling factor CHD3 OS=Oryza
            sativa subsp. indica GN=PKL PE=4 SV=1
          Length = 1111

 Score =  139 bits (349), Expect = 2e-31
 Identities = 84/204 (41%), Positives = 112/204 (54%), Gaps = 4/204 (1%)
 Frame = +3

Query: 27   QEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXXTDLL 206
            QEELDDI+R+G+KELF DENDE  KS QIHYDDAAIDRLLDR Q             + L
Sbjct: 768  QEELDDIIRHGSKELFDDENDEAGKSCQIHYDDAAIDRLLDRDQADGEEPVEDEEEDEFL 827

Query: 207  KAFKVANFEYKEDDGPKEAEGSEDAKELDSEA----KAQYWDDLLKQRYEEQQQRDAAAQ 374
            K FKVANFEY ++     A+  E  K+ ++EA    +A +WD LLK RY+ Q+  +    
Sbjct: 828  KGFKVANFEYIDEAKALAAKEEEARKKAEAEAANSDRANFWDKLLKDRYDVQKVEEHTT- 886

Query: 375  LGKGKRARRQVFASGEDDLAGMXXXXXXXXXXXXXXXXXXXXXXKEIPDGFERRPSMPKK 554
            +GKGKR+R+Q+ A+ EDD+ G+                       +      R P   KK
Sbjct: 887  MGKGKRSRKQMAAADEDDITGLHDMSSEDDDYSYDDDVSDNDTSLQSGLAGRRGPYSKKK 946

Query: 555  KPRVDSSEPAGPPPLIHGEGKSLK 626
            +  VDS       P + GEG++L+
Sbjct: 947  QRNVDSL------PFMEGEGRALR 964


>tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza
            sativa subsp. japonica GN=OSJNBb0036B04.22 PE=4 SV=1
          Length = 1354

 Score =  139 bits (349), Expect = 2e-31
 Identities = 84/204 (41%), Positives = 112/204 (54%), Gaps = 4/204 (1%)
 Frame = +3

Query: 27   QEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXXTDLL 206
            QEELDDI+R+G+KELF DENDE  KS QIHYDDAAIDRLLDR Q             + L
Sbjct: 762  QEELDDIIRHGSKELFDDENDEAGKSCQIHYDDAAIDRLLDRDQADGEEPVEDEEEDEFL 821

Query: 207  KAFKVANFEYKEDDGPKEAEGSEDAKELDSEA----KAQYWDDLLKQRYEEQQQRDAAAQ 374
            K FKVANFEY ++     A+  E  K+ ++EA    +A +WD LLK RY+ Q+  +    
Sbjct: 822  KGFKVANFEYIDEAKALAAKEEEARKKAEAEAANSDRANFWDKLLKDRYDVQKVEEHTT- 880

Query: 375  LGKGKRARRQVFASGEDDLAGMXXXXXXXXXXXXXXXXXXXXXXKEIPDGFERRPSMPKK 554
            +GKGKR+R+Q+ A+ EDD+ G+                       +      R P   KK
Sbjct: 881  MGKGKRSRKQMAAADEDDITGLHDMSSEDDDYSYDDDVSDNDTSLQSGLAGRRGPYSKKK 940

Query: 555  KPRVDSSEPAGPPPLIHGEGKSLK 626
            +  VDS       P + GEG++L+
Sbjct: 941  QRNVDSL------PFMEGEGRALR 958


>tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza
            sativa subsp. japonica GN=Os06g0183800 PE=4 SV=1
          Length = 1335

 Score =  139 bits (349), Expect = 2e-31
 Identities = 84/204 (41%), Positives = 112/204 (54%), Gaps = 4/204 (1%)
 Frame = +3

Query: 27   QEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXXTDLL 206
            QEELDDI+R+G+KELF DENDE  KS QIHYDDAAIDRLLDR Q             + L
Sbjct: 743  QEELDDIIRHGSKELFDDENDEAGKSCQIHYDDAAIDRLLDRDQADGEEPVEDEEEDEFL 802

Query: 207  KAFKVANFEYKEDDGPKEAEGSEDAKELDSEA----KAQYWDDLLKQRYEEQQQRDAAAQ 374
            K FKVANFEY ++     A+  E  K+ ++EA    +A +WD LLK RY+ Q+  +    
Sbjct: 803  KGFKVANFEYIDEAKALAAKEEEARKKAEAEAANSDRANFWDKLLKDRYDVQKVEEHTT- 861

Query: 375  LGKGKRARRQVFASGEDDLAGMXXXXXXXXXXXXXXXXXXXXXXKEIPDGFERRPSMPKK 554
            +GKGKR+R+Q+ A+ EDD+ G+                       +      R P   KK
Sbjct: 862  MGKGKRSRKQMAAADEDDITGLHDMSSEDDDYSYDDDVSDNDTSLQSGLAGRRGPYSKKK 921

Query: 555  KPRVDSSEPAGPPPLIHGEGKSLK 626
            +  VDS       P + GEG++L+
Sbjct: 922  QRNVDSL------PFMEGEGRALR 939


>tr|B8B3I5|B8B3I5_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_21929 PE=4 SV=1
          Length = 1309

 Score =  139 bits (349), Expect = 2e-31
 Identities = 84/204 (41%), Positives = 112/204 (54%), Gaps = 4/204 (1%)
 Frame = +3

Query: 27   QEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXXTDLL 206
            QEELDDI+R+G+KELF DENDE  KS QIHYDDAAIDRLLDR Q             + L
Sbjct: 717  QEELDDIIRHGSKELFDDENDEAGKSCQIHYDDAAIDRLLDRDQADGEEPVEDEEEDEFL 776

Query: 207  KAFKVANFEYKEDDGPKEAEGSEDAKELDSEA----KAQYWDDLLKQRYEEQQQRDAAAQ 374
            K FKVANFEY ++     A+  E  K+ ++EA    +A +WD LLK RY+ Q+  +    
Sbjct: 777  KGFKVANFEYIDEAKALAAKEEEARKKAEAEAANSDRANFWDKLLKDRYDVQKVEEHTT- 835

Query: 375  LGKGKRARRQVFASGEDDLAGMXXXXXXXXXXXXXXXXXXXXXXKEIPDGFERRPSMPKK 554
            +GKGKR+R+Q+ A+ EDD+ G+                       +      R P   KK
Sbjct: 836  MGKGKRSRKQMAAADEDDITGLHDMSSEDDDYSYDDDVSDNDTSLQSGLAGRRGPYSKKK 895

Query: 555  KPRVDSSEPAGPPPLIHGEGKSLK 626
            +  VDS       P + GEG++L+
Sbjct: 896  QRNVDSL------PFMEGEGRALR 913


>tr|A3B915|A3B915_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_019537 PE=4 SV=1
          Length = 1364

 Score =  135 bits (341), Expect = 2e-30
 Identities = 84/205 (40%), Positives = 113/205 (55%), Gaps = 5/205 (2%)
 Frame = +3

Query: 27   QEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQXXXXXXXXXXXXTDLL 206
            QEELDDI+R+G+KELF DENDE  KS QIHYDDAAIDRLLDR Q             + L
Sbjct: 771  QEELDDIIRHGSKELFDDENDEAGKSCQIHYDDAAIDRLLDRDQADGEEPVEDEEEDEFL 830

Query: 207  KAFKVANFEYKEDDGPKEAEGSEDAKELDSEA----KAQYWDDLLKQRYEEQQQRDAAAQ 374
            K FKVANFEY ++     A+  E  K+ ++EA    +A +WD LLK RY+ Q+  +    
Sbjct: 831  KGFKVANFEYIDEAKALAAKEEEARKKAEAEAANSDRANFWDKLLKDRYDVQKVEEHTT- 889

Query: 375  LGKGKRARRQVFASGEDDLAGMXXXXXXXXXXXXXXXXXXXXXXKEIPDGFERRP-SMPK 551
            +GKGKR+R+Q+ A+ EDD+ G+                       +      R P S  K
Sbjct: 890  MGKGKRSRKQMAAADEDDITGLHDMSSEDDDYSYDDDVSDNDTSLQSGLAGRRGPYSKKK 949

Query: 552  KKPRVDSSEPAGPPPLIHGEGKSLK 626
            ++  VDS       P + GEG++L+
Sbjct: 950  QRSNVDSL------PFMEGEGRALR 968


>tr|Q9SZ57|Q9SZ57_ARATH Putative uncharacterized protein AT4g31900
            OS=Arabidopsis thaliana GN=AT4g31900 PE=2 SV=1
          Length = 1067

 Score =  120 bits (302), Expect = 5e-26
 Identities = 82/215 (38%), Positives = 119/215 (55%), Gaps = 11/215 (5%)
 Frame = +3

Query: 12   QQVLNQEELDDILRYGAKELFADENDEKTKSQQIHYDDAAIDRLLDRSQ-XXXXXXXXXX 188
            +Q L Q+ELDDI++YG+KELF++ENDE  +S +IHYDDAAI++LLDR+            
Sbjct: 565  KQHLCQDELDDIIKYGSKELFSEENDEAGRSGKIHYDDAAIEQLLDRNHVDAVEVSLDDE 624

Query: 189  XXTDLLKAFKVANFEYKEDDGP----KEAEGSEDAKELDSEAKAQYWDDLLKQRYEEQQQ 356
              TD LK FKVA+FEY +D+      +EA+  E+   + +  +  +W DLLK +YE QQ 
Sbjct: 625  EETDFLKNFKVASFEYVDDENEAAALEEAQAIENNSSVRNADRTSHWKDLLKDKYEVQQA 684

Query: 357  RDAAAQLGKGKRARRQVFASGEDDLAGMXXXXXXXXXXXXXXXXXXXXXXKEIPD---GF 527
             + +A LGK KR  +QV  + EDDL G+                      +E  +     
Sbjct: 685  EELSA-LGKRKRNGKQVMYA-EDDLDGLEEISDEEDEYCLDDLKVTSDEEEEADEPEAAR 742

Query: 528  ERRP---SMPKKKPRVDSSEPAGPPPLIHGEGKSL 623
            +R+P   + P +K   D+SE     PL+ GEG+ L
Sbjct: 743  QRKPRTVTRPYRKRARDNSEEI---PLMEGEGRYL 774


>tr|A3KN93|A3KN93_XENTR Chd4 protein OS=Xenopus tropicalis GN=chd5
            PE=2 SV=1
          Length = 1888

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 4/133 (3%)
 Frame = +3

Query: 21   LNQEELDDILRYGAKELFADENDEKTKSQQ----IHYDDAAIDRLLDRSQXXXXXXXXXX 188
            ++++ELDDIL++G +ELF DE  E+ K       IHYDD AI RLLDR+Q          
Sbjct: 1200 MSKQELDDILKFGTEELFKDEATEENKEGDDISVIHYDDKAIARLLDRNQDETEDLVELQ 1259

Query: 189  XXTDLLKAFKVANFEYKEDDGPKEAEGSEDAKELDSEAKAQYWDDLLKQRYEEQQQRDAA 368
               + L +FKVA +  +E++   E E   +  + +      YW+ LL+  Y EQQQ D A
Sbjct: 1260 GMNEYLSSFKVAQYVVREEEMGDEEEVVREIIKQEESVDPDYWEKLLRHHY-EQQQEDLA 1318

Query: 369  AQLGKGKRARRQV 407
              LGKGKR R+QV
Sbjct: 1319 RNLGKGKRIRKQV 1331