DK952354
Clone id TST38A01NGRL0013_N20
Library
Length 626
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_N20. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GTGAATCAGGCGAGGAAGAGGAAGCAAATCGAGGCAATGGCCACAGCTACTTCTGCATTG
AGTAGCTCTACCTTTGCAGGGCAGACCGCTCTGAAGCCTCAGAACGAGCTGTCCAAGAGG
GTGGGCAATGTGGAGGCTCGGGTGAGCATGAGGAGGACCGTGAAGAGCACTCCAGAGAGC
ATCTGGTATGGTCCAGATCGCCCTAAGTACCTGGGCCCCTTCTCCGAGGCCACTCCCTCT
TACCTGACCGGTGAGTTCCCCGGTGATTACGGCTGGGACACCGCCGGCCTGTCTGCCGAC
CCCGAGACCTTCGCGAAGAACCGCGAGCTGGAGGTCATTCATGCCAGGTGGGCAATGTTG
GGCGCCCTCGGGTGTGTGACCCCTGAGCTGTTGGCTAAGAACGGCGTGAAGTTTGGTGAG
GCAGTGTGGTTCAAGGCTGGCTCTCAAATCTTCGCTGACGGAGGGTTGGACTACTTGGGC
AACCCCAGCTTGGTGCACGCTCAGAGCATTTTGGCCATCTGGGCATGTCAGGTTGTGCTG
ATGGGCGCTGTTGAGGGTTACAGAGTTGGCGGCGGCCCCCTCGGCGAGGGCCTGGACCCC
ATCTACCCCGGTGGTTCCTTCGACCC
■■Homology search results ■■ -
sp_hit_id P12332
Definition sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis
Align length 184
Score (bit) 350.0
E-value 4.0e-96
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952354|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_N20, 5'
(626 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas... 350 4e-96
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 336 5e-92
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 332 7e-91
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 331 2e-90
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 331 2e-90
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 330 3e-90
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 328 1e-89
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop... 327 4e-89
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas... 321 2e-87
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas... 321 2e-87
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 319 6e-87
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 315 9e-86
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 308 1e-83
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 300 3e-81
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 300 5e-81
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 297 3e-80
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 297 3e-80
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 296 6e-80
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 296 6e-80
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 295 1e-79
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 294 2e-79
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 294 3e-79
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 294 3e-79
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 293 4e-79
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 293 5e-79
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 293 5e-79
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 293 5e-79
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 293 6e-79
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 292 8e-79
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 292 8e-79

>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
(Fragment) OS=Silene pratensis PE=2 SV=2
Length = 205

Score = 350 bits (897), Expect = 4e-96
Identities = 165/184 (89%), Positives = 172/184 (93%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
FAGQT LKPQNEL ++VG RVSMRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11 FAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
KAGSQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLD +YPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPG 190

Query: 613 GSFD 624
G+FD
Sbjct: 191 GAFD 194


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
Length = 265

Score = 336 bits (862), Expect = 5e-92
Identities = 160/185 (86%), Positives = 170/185 (91%), Gaps = 1/185 (0%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
FAGQTALK NEL ++G V RVSMRRTVKS P SIWYGPDRPKYLGPFS+ PSYLT
Sbjct: 11 FAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDPIYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYP 190

Query: 610 GGSFD 624
GG+FD
Sbjct: 191 GGAFD 195


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
chloroplastic OS=Pinus thunbergii PE=2 SV=1
Length = 266

Score = 332 bits (852), Expect = 7e-91
Identities = 154/184 (83%), Positives = 170/184 (92%), Gaps = 1/184 (0%)
Frame = +1

Query: 76 AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
AGQT L+PQ NEL K+VG +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13 AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
EFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWF
Sbjct: 73 EFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWF 132

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
KAG+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVGGG LGEGLDP+ PG
Sbjct: 133 KAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPG 192

Query: 613 GSFD 624
G+FD
Sbjct: 193 GAFD 196


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
I, chloroplastic OS=Lemna gibba PE=3 SV=1
Length = 264

Score = 331 bits (849), Expect = 2e-90
Identities = 153/184 (83%), Positives = 172/184 (93%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
FAGQTALK ++EL ++VG + R SMRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTG
Sbjct: 11 FAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
KAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPG 190

Query: 613 GSFD 624
G+FD
Sbjct: 191 GAFD 194


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
Length = 265

Score = 331 bits (848), Expect = 2e-90
Identities = 156/185 (84%), Positives = 168/185 (90%), Gaps = 1/185 (0%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
F GQ K QNE ++VGN E R++MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11 FVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
FKAGSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 610 GGSFD 624
GG+FD
Sbjct: 191 GGAFD 195


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
Length = 265

Score = 330 bits (847), Expect = 3e-90
Identities = 154/185 (83%), Positives = 170/185 (91%), Gaps = 1/185 (0%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
FAGQTALK QNEL +++G+ R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
FKAGSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYP 190

Query: 610 GGSFD 624
GG+FD
Sbjct: 191 GGAFD 195


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
Length = 265

Score = 328 bits (841), Expect = 1e-89
Identities = 155/185 (83%), Positives = 169/185 (91%), Gaps = 1/185 (0%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
FAGQTALK QNEL +++G+ R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGV FGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 610 GGSFD 624
GG+FD
Sbjct: 191 GGAFD 195


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
Length = 265

Score = 327 bits (837), Expect = 4e-89
Identities = 154/185 (83%), Positives = 167/185 (90%), Gaps = 1/185 (0%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
F G+T L+ NE ++ GN +AR +MRRTVKS PESIWYGPDRPKYLGPFSE PSYLT
Sbjct: 11 FTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
GEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGC PELL KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
FKAGSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYP 190

Query: 610 GGSFD 624
GG+FD
Sbjct: 191 GGAFD 195


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263

Score = 321 bits (823), Expect = 2e-87
Identities = 148/175 (84%), Positives = 165/175 (94%)
Frame = +1

Query: 100 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 279
++EL +RVG+ R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19 RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 280 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 459
TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79 TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 460 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGGSFD 624
GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGG+FD
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFD 193



Score = 30.8 bits (68), Expect = 5.9
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1

Query: 214 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 393
GP E L +PG +D GL+ DP+TFA+ + E+ + R AM G ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 394 AKNG 405
G
Sbjct: 232 TGKG 235


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263

Score = 321 bits (823), Expect = 2e-87
Identities = 148/175 (84%), Positives = 165/175 (94%)
Frame = +1

Query: 100 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 279
++EL +RVG+ R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19 RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 280 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 459
TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79 TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 460 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGGSFD 624
GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGG+FD
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFD 193



Score = 30.8 bits (68), Expect = 5.9
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +1

Query: 214 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 393
GP E L +PG +D GL+ DP+TFA+ + E+ + R AM G ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 394 AKNG 405
G
Sbjct: 232 TGKG 235


tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 184
Score (bit) 344.0
E-value 3.0e-93
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952354|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_N20, 5'
(626 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ... 344 3e-93
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu... 341 2e-92
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ... 340 4e-92
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote... 340 5e-92
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos... 339 9e-92
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti... 338 2e-91
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran... 338 2e-91
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=... 337 3e-91
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=... 337 3e-91
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ... 337 3e-91
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v... 337 3e-91
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea... 337 3e-91
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea... 337 3e-91
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ... 337 4e-91
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ... 336 6e-91
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b... 336 8e-91
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ... 336 8e-91
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea... 336 8e-91
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea... 335 1e-90
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea... 335 1e-90
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea... 335 2e-90
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ... 334 3e-90
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul... 333 4e-90
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul... 333 4e-90
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea... 332 1e-89
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 331 2e-89
tr|Q93YG3|Q93YG3_SOYBN Chlorophyll a/b binding protein type II O... 329 7e-89
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 328 1e-88
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti... 328 2e-88
tr|Q41449|Q41449_SOLTU Chlorophyll a,b binding protein type I OS... 328 2e-88

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
thunbergii GN=cab PE=4 SV=1
Length = 266

Score = 344 bits (882), Expect = 3e-93
Identities = 159/184 (86%), Positives = 174/184 (94%), Gaps = 1/184 (0%)
Frame = +1

Query: 76 AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
AGQT L+PQ NEL K+VG +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13 AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWF
Sbjct: 73 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWF 132

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPG 192

Query: 613 GSFD 624
G+FD
Sbjct: 193 GAFD 196


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
Length = 264

Score = 341 bits (874), Expect = 2e-92
Identities = 160/184 (86%), Positives = 170/184 (92%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
FAGQTALK QNEL +RVG+ R MRRT STP+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11 FAGQTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPG 190

Query: 613 GSFD 624
G+FD
Sbjct: 191 GAFD 194


>tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax
ginseng GN=cab PE=2 SV=1
Length = 265

Score = 340 bits (872), Expect = 4e-92
Identities = 160/185 (86%), Positives = 175/185 (94%), Gaps = 1/185 (0%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
FAGQTALKPQNEL +++G++ R++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+LA+NGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILARNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
FKAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 610 GGSFD 624
GGSFD
Sbjct: 191 GGSFD 195


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
OS=Pachysandra terminalis PE=2 SV=1
Length = 264

Score = 340 bits (871), Expect = 5e-92
Identities = 158/183 (86%), Positives = 171/183 (93%)
Frame = +1

Query: 76 AGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGE 255
AG+TALK QNEL K+VG R+SM RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGE
Sbjct: 12 AGRTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 435
FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 131

Query: 436 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGG 615
AG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYPGG
Sbjct: 132 AGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYPGG 191

Query: 616 SFD 624
+FD
Sbjct: 192 AFD 194


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
chr12 scaffold_47, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
Length = 265

Score = 339 bits (869), Expect = 9e-92
Identities = 160/185 (86%), Positives = 173/185 (93%), Gaps = 1/185 (0%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
FAGQTALK NEL ++VG + R++MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
FKAG+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYP 190

Query: 610 GGSFD 624
GG+FD
Sbjct: 191 GGAFD 195


>tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesting
chlorophyll a/b-binding protein) OS=Arabidopsis thaliana
GN=Lhcb2:4 PE=2 SV=1
Length = 266

Score = 338 bits (867), Expect = 2e-91
Identities = 155/186 (83%), Positives = 173/186 (93%), Gaps = 2/186 (1%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVG--NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYL 246
FAGQT LKP N+L +++G N R+ MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYL
Sbjct: 11 FAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYL 70

Query: 247 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 426
TGE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC PE+L+KNGVKFGEAV
Sbjct: 71 TGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAV 130

Query: 427 WFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIY 606
WFKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYR+GGGPLGEGLDP+Y
Sbjct: 131 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGGGPLGEGLDPLY 190

Query: 607 PGGSFD 624
PGG+FD
Sbjct: 191 PGGAFD 196


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
Length = 264

Score = 338 bits (866), Expect = 2e-91
Identities = 157/184 (85%), Positives = 169/184 (91%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
F GQT LK QNEL ++VG R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11 FVGQTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
EFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71 EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
KAGSQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPG 190

Query: 613 GSFD 624
G+FD
Sbjct: 191 GAFD 194


>tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana
GN=Lhcb2.3 PE=2 SV=1
Length = 265

Score = 337 bits (865), Expect = 3e-91
Identities = 157/185 (84%), Positives = 174/185 (94%), Gaps = 1/185 (0%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
FAGQTALKP NEL ++VG + RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC PE+L+KNGVKFGEAVW
Sbjct: 71 GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190

Query: 610 GGSFD 624
GG+FD
Sbjct: 191 GGAFD 195


>tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana
GN=Lhcb2.1 PE=2 SV=1
Length = 265

Score = 337 bits (865), Expect = 3e-91
Identities = 157/185 (84%), Positives = 174/185 (94%), Gaps = 1/185 (0%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
FAGQTALKP NEL ++VG + RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC PE+L+KNGVKFGEAVW
Sbjct: 71 GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190

Query: 610 GGSFD 624
GG+FD
Sbjct: 191 GGAFD 195


>tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein
(At2g05100/F15L11.2) OS=Arabidopsis thaliana
GN=At2g05100 PE=2 SV=1
Length = 265

Score = 337 bits (865), Expect = 3e-91
Identities = 157/185 (84%), Positives = 174/185 (94%), Gaps = 1/185 (0%)
Frame = +1

Query: 73 FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
FAGQTALKP NEL ++VG + RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11 FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC PE+L+KNGVKFGEAVW
Sbjct: 71 GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190

Query: 610 GGSFD 624
GG+FD
Sbjct: 191 GGAFD 195