NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952354
Clone id TST38A01NGRL0013_N20
Library
Length 626
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_N20. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GTGAATCAGGCGAGGAAGAGGAAGCAAATCGAGGCAATGGCCACAGCTACTTCTGCATTG
AGTAGCTCTACCTTTGCAGGGCAGACCGCTCTGAAGCCTCAGAACGAGCTGTCCAAGAGG
GTGGGCAATGTGGAGGCTCGGGTGAGCATGAGGAGGACCGTGAAGAGCACTCCAGAGAGC
ATCTGGTATGGTCCAGATCGCCCTAAGTACCTGGGCCCCTTCTCCGAGGCCACTCCCTCT
TACCTGACCGGTGAGTTCCCCGGTGATTACGGCTGGGACACCGCCGGCCTGTCTGCCGAC
CCCGAGACCTTCGCGAAGAACCGCGAGCTGGAGGTCATTCATGCCAGGTGGGCAATGTTG
GGCGCCCTCGGGTGTGTGACCCCTGAGCTGTTGGCTAAGAACGGCGTGAAGTTTGGTGAG
GCAGTGTGGTTCAAGGCTGGCTCTCAAATCTTCGCTGACGGAGGGTTGGACTACTTGGGC
AACCCCAGCTTGGTGCACGCTCAGAGCATTTTGGCCATCTGGGCATGTCAGGTTGTGCTG
ATGGGCGCTGTTGAGGGTTACAGAGTTGGCGGCGGCCCCCTCGGCGAGGGCCTGGACCCC
ATCTACCCCGGTGGTTCCTTCGACCC
■■Homology search results ■■ -
sp_hit_id P12332
Definition sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis
Align length 184
Score (bit) 350.0
E-value 4.0e-96
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952354|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_N20, 5'
         (626 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   350   4e-96
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   336   5e-92
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   332   7e-91
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   331   2e-90
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   331   2e-90
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   330   3e-90
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   328   1e-89
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   327   4e-89
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   321   2e-87
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   321   2e-87
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   319   6e-87
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   315   9e-86
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   308   1e-83
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   300   3e-81
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   300   5e-81
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   297   3e-80
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   297   3e-80
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   296   6e-80
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   296   6e-80
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   295   1e-79
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   294   2e-79
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   294   3e-79
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   294   3e-79
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   293   4e-79
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   293   5e-79
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   293   5e-79
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   293   5e-79
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   293   6e-79
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   292   8e-79
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   292   8e-79

>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  350 bits (897), Expect = 4e-96
 Identities = 165/184 (89%), Positives = 172/184 (93%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           FAGQT LKPQNEL ++VG    RVSMRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
           KAGSQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLD +YPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPG 190

Query: 613 GSFD 624
           G+FD
Sbjct: 191 GAFD 194


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  336 bits (862), Expect = 5e-92
 Identities = 160/185 (86%), Positives = 170/185 (91%), Gaps = 1/185 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALK  NEL  ++G V   RVSMRRTVKS P SIWYGPDRPKYLGPFS+  PSYLT
Sbjct: 11  FAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDPIYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYP 190

Query: 610 GGSFD 624
           GG+FD
Sbjct: 191 GGAFD 195


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  332 bits (852), Expect = 7e-91
 Identities = 154/184 (83%), Positives = 170/184 (92%), Gaps = 1/184 (0%)
 Frame = +1

Query: 76  AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           AGQT L+PQ NEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWF
Sbjct: 73  EFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWF 132

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
           KAG+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVGGG LGEGLDP+ PG
Sbjct: 133 KAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPG 192

Query: 613 GSFD 624
           G+FD
Sbjct: 193 GAFD 196


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  331 bits (849), Expect = 2e-90
 Identities = 153/184 (83%), Positives = 172/184 (93%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           FAGQTALK ++EL ++VG  + R SMRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTG
Sbjct: 11  FAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
           KAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPG 190

Query: 613 GSFD 624
           G+FD
Sbjct: 191 GAFD 194


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  331 bits (848), Expect = 2e-90
 Identities = 156/185 (84%), Positives = 168/185 (90%), Gaps = 1/185 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           F GQ   K QNE  ++VGN  E R++MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
           FKAGSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 610 GGSFD 624
           GG+FD
Sbjct: 191 GGAFD 195


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
           chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
          Length = 265

 Score =  330 bits (847), Expect = 3e-90
 Identities = 154/185 (83%), Positives = 170/185 (91%), Gaps = 1/185 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALK QNEL +++G+    R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
           FKAGSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYP 190

Query: 610 GGSFD 624
           GG+FD
Sbjct: 191 GGAFD 195


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score =  328 bits (841), Expect = 1e-89
 Identities = 155/185 (83%), Positives = 169/185 (91%), Gaps = 1/185 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALK QNEL +++G+    R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGV FGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 610 GGSFD 624
           GG+FD
Sbjct: 191 GGAFD 195


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
           chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
          Length = 265

 Score =  327 bits (837), Expect = 4e-89
 Identities = 154/185 (83%), Positives = 167/185 (90%), Gaps = 1/185 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           F G+T L+  NE  ++ GN  +AR +MRRTVKS PESIWYGPDRPKYLGPFSE  PSYLT
Sbjct: 11  FTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGC  PELL KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
           FKAGSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYP 190

Query: 610 GGSFD 624
           GG+FD
Sbjct: 191 GGAFD 195


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  321 bits (823), Expect = 2e-87
 Identities = 148/175 (84%), Positives = 165/175 (94%)
 Frame = +1

Query: 100 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 279
           ++EL +RVG+   R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 280 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 459
           TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 460 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGGSFD 624
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGG+FD
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFD 193



 Score = 30.8 bits (68), Expect = 5.9
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +1

Query: 214 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 393
           GP  E     L   +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 394 AKNG 405
              G
Sbjct: 232 TGKG 235


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  321 bits (823), Expect = 2e-87
 Identities = 148/175 (84%), Positives = 165/175 (94%)
 Frame = +1

Query: 100 QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 279
           ++EL +RVG+   R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 280 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 459
           TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 460 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGGSFD 624
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGG+FD
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFD 193



 Score = 30.8 bits (68), Expect = 5.9
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +1

Query: 214 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 393
           GP  E     L   +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 394 AKNG 405
              G
Sbjct: 232 TGKG 235
tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 184
Score (bit) 344.0
E-value 3.0e-93
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952354|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_N20, 5'
         (626 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   344   3e-93
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   341   2e-92
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   340   4e-92
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   340   5e-92
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos...   339   9e-92
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   338   2e-91
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   338   2e-91
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   337   3e-91
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   337   3e-91
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   337   3e-91
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   337   3e-91
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   337   3e-91
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   337   3e-91
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   337   4e-91
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ...   336   6e-91
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   336   8e-91
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   336   8e-91
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   336   8e-91
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   335   1e-90
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   335   1e-90
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   335   2e-90
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ...   334   3e-90
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul...   333   4e-90
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul...   333   4e-90
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   332   1e-89
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   331   2e-89
tr|Q93YG3|Q93YG3_SOYBN Chlorophyll a/b binding protein type II O...   329   7e-89
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   328   1e-88
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti...   328   2e-88
tr|Q41449|Q41449_SOLTU Chlorophyll a,b binding protein type I OS...   328   2e-88

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  344 bits (882), Expect = 3e-93
 Identities = 159/184 (86%), Positives = 174/184 (94%), Gaps = 1/184 (0%)
 Frame = +1

Query: 76  AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           AGQT L+PQ NEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWF 132

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPG 192

Query: 613 GSFD 624
           G+FD
Sbjct: 193 GAFD 196


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
           putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
          Length = 264

 Score =  341 bits (874), Expect = 2e-92
 Identities = 160/184 (86%), Positives = 170/184 (92%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           FAGQTALK QNEL +RVG+   R  MRRT  STP+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPG 190

Query: 613 GSFD 624
           G+FD
Sbjct: 191 GAFD 194


>tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax
           ginseng GN=cab PE=2 SV=1
          Length = 265

 Score =  340 bits (872), Expect = 4e-92
 Identities = 160/185 (86%), Positives = 175/185 (94%), Gaps = 1/185 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALKPQNEL +++G++   R++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+LA+NGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILARNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
           FKAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 610 GGSFD 624
           GGSFD
Sbjct: 191 GGSFD 195


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
           OS=Pachysandra terminalis PE=2 SV=1
          Length = 264

 Score =  340 bits (871), Expect = 5e-92
 Identities = 158/183 (86%), Positives = 171/183 (93%)
 Frame = +1

Query: 76  AGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGE 255
           AG+TALK QNEL K+VG    R+SM RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGE
Sbjct: 12  AGRTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 256 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 435
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 131

Query: 436 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGG 615
           AG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYPGG
Sbjct: 132 AGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYPGG 191

Query: 616 SFD 624
           +FD
Sbjct: 192 AFD 194


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_47, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
          Length = 265

 Score =  339 bits (869), Expect = 9e-92
 Identities = 160/185 (86%), Positives = 173/185 (93%), Gaps = 1/185 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALK  NEL ++VG +   R++MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
           FKAG+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYP 190

Query: 610 GGSFD 624
           GG+FD
Sbjct: 191 GGAFD 195


>tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesting
           chlorophyll a/b-binding protein) OS=Arabidopsis thaliana
           GN=Lhcb2:4 PE=2 SV=1
          Length = 266

 Score =  338 bits (867), Expect = 2e-91
 Identities = 155/186 (83%), Positives = 173/186 (93%), Gaps = 2/186 (1%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVG--NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYL 246
           FAGQT LKP N+L +++G  N   R+ MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYL
Sbjct: 11  FAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYL 70

Query: 247 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 426
           TGE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC  PE+L+KNGVKFGEAV
Sbjct: 71  TGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAV 130

Query: 427 WFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIY 606
           WFKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYR+GGGPLGEGLDP+Y
Sbjct: 131 WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGGGPLGEGLDPLY 190

Query: 607 PGGSFD 624
           PGG+FD
Sbjct: 191 PGGAFD 196


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
           OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
          Length = 264

 Score =  338 bits (866), Expect = 2e-91
 Identities = 157/184 (85%), Positives = 169/184 (91%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 252
           F GQT LK QNEL ++VG    R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FVGQTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 253 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 432
           EFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 433 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 612
           KAGSQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPG 190

Query: 613 GSFD 624
           G+FD
Sbjct: 191 GAFD 194


>tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana
           GN=Lhcb2.3 PE=2 SV=1
          Length = 265

 Score =  337 bits (865), Expect = 3e-91
 Identities = 157/185 (84%), Positives = 174/185 (94%), Gaps = 1/185 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALKP NEL ++VG +   RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC  PE+L+KNGVKFGEAVW
Sbjct: 71  GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190

Query: 610 GGSFD 624
           GG+FD
Sbjct: 191 GGAFD 195


>tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana
           GN=Lhcb2.1 PE=2 SV=1
          Length = 265

 Score =  337 bits (865), Expect = 3e-91
 Identities = 157/185 (84%), Positives = 174/185 (94%), Gaps = 1/185 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALKP NEL ++VG +   RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC  PE+L+KNGVKFGEAVW
Sbjct: 71  GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190

Query: 610 GGSFD 624
           GG+FD
Sbjct: 191 GGAFD 195


>tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein
           (At2g05100/F15L11.2) OS=Arabidopsis thaliana
           GN=At2g05100 PE=2 SV=1
          Length = 265

 Score =  337 bits (865), Expect = 3e-91
 Identities = 157/185 (84%), Positives = 174/185 (94%), Gaps = 1/185 (0%)
 Frame = +1

Query: 73  FAGQTALKPQNELSKRVG-NVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 249
           FAGQTALKP NEL ++VG +   RV+MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLT 70

Query: 250 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 429
           GE+PGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC  PE+L+KNGVKFGEAVW
Sbjct: 71  GEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVW 130

Query: 430 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 609
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+GGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYP 190

Query: 610 GGSFD 624
           GG+FD
Sbjct: 191 GGAFD 195