DK952365
Clone id TST38A01NGRL0013_O07
Library
Length 658
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_O07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
ATGGTTTCACCTGTTCTACATCCGCCATCGTGCAGCGTATGCGGCAGCAGAATTTCAGCA
GCTGCGTCGCCGCGCCCATTATGCCCACCGGTCCATGGAAATCGTCACCAAGCTCAGGTT
CTTGCAAGGGCGAGTGCAGGAGGGTGGCCCGGTTGTCAAGATCTCTCTTCTTCTCAACAT
CGCTTTGTTGCGTCCTCGCCTTTCGGACACTCCAACGCAGTGCTAAGCTCAGATTGGGCT
CTTGGTTCCTCTCCTCTCAGCATTCAAGCCCCATCAGGGTCCGCCCAAAGGCCCCCTGAC
ACTGATGTCATGGGCCTTCTGCTCCGCCAGCGCATTGTCTTCCTCGGCTTCAACCTGGAT
GAGTTCGCTGCGGATGCCATCATCAGCCAGCTTCTGCTTCTTGATGCTCAAGACCCTACT
AAGGATATCCGCCTCTTCATTAACAGCCCCGGAGGTGCCACCAGTGCTTCCATGGCCGTG
TATGATGCTATTCAGCTGTGTCGTGCCGATATATCTACAATAGCATTCGGTATTGCGGCA
TCGACTGCTGCCATAGTGTTAGCAGGTGGAACAAAGGGGAAAAGGTTTGCGATGCCAAAC
ACGAGAATTATGCTTCATCAGCCATTAGCAGGTGCAAGTGGGCAAGTGATTGATGTGG
■■Homology search results ■■ -
sp_hit_id Q94B60
Definition sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana
Align length 171
Score (bit) 193.0
E-value 6.0e-49
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952365|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_O07, 5'
(658 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic sub... 193 6e-49
sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic sub... 153 9e-37
sp|Q3ANI8|CLPP1_SYNSC ATP-dependent Clp protease proteolytic sub... 147 6e-35
sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic sub... 146 8e-35
sp|Q3B0U1|CLPP2_SYNS9 ATP-dependent Clp protease proteolytic sub... 146 8e-35
sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic sub... 146 8e-35
sp|A8F754|CLPP_THELT ATP-dependent Clp protease proteolytic subu... 146 1e-34
sp|Q7V992|CLPP1_PROMM ATP-dependent Clp protease proteolytic sub... 146 1e-34
sp|Q59993|CLPP2_SYNY3 ATP-dependent Clp protease proteolytic sub... 145 1e-34
sp|Q8YQX8|CLPP2_ANASP ATP-dependent Clp protease proteolytic sub... 145 1e-34
sp|Q317Y6|CLPP4_PROM9 ATP-dependent Clp protease proteolytic sub... 144 3e-34
sp|Q7UA36|CLPP1_SYNPX ATP-dependent Clp protease proteolytic sub... 144 3e-34
sp|Q46ID4|CLPP3_PROMT ATP-dependent Clp protease proteolytic sub... 143 7e-34
sp|Q7V9L6|CLPP3_PROMA ATP-dependent Clp protease proteolytic sub... 143 7e-34
sp|Q3M726|CLPP3_ANAVT ATP-dependent Clp protease proteolytic sub... 143 7e-34
sp|Q8DLI2|CLPP1_THEEB ATP-dependent Clp protease proteolytic sub... 142 2e-33
sp|A5IJ91|CLPP_THEP1 ATP-dependent Clp protease proteolytic subu... 141 3e-33
sp|Q9WZF9|CLPP_THEMA ATP-dependent Clp protease proteolytic subu... 141 3e-33
sp|Q2RL31|CLPP_MOOTA ATP-dependent Clp protease proteolytic subu... 141 3e-33
sp|Q7UZK7|CLPP3_PROMP ATP-dependent Clp protease proteolytic sub... 141 3e-33
sp|Q5KVD9|CLPP_GEOKA ATP-dependent Clp protease proteolytic subu... 139 1e-32
sp|A4ISQ2|CLPP_GEOTN ATP-dependent Clp protease proteolytic subu... 139 2e-32
sp|Q0AWF0|CLPP_SYNWW ATP-dependent Clp protease proteolytic subu... 138 2e-32
sp|A4JF05|CLPP_BURVG ATP-dependent Clp protease proteolytic subu... 138 2e-32
sp|Q39FE8|CLPP_BURS3 ATP-dependent Clp protease proteolytic subu... 138 2e-32
sp|Q0BEF6|CLPP_BURCM ATP-dependent Clp protease proteolytic subu... 138 2e-32
sp|A0K847|CLPP_BURCH ATP-dependent Clp protease proteolytic subu... 138 2e-32
sp|Q1BH85|CLPP_BURCA ATP-dependent Clp protease proteolytic subu... 138 2e-32
sp|Q2SWQ6|CLPP_BURTA ATP-dependent Clp protease proteolytic subu... 137 4e-32
sp|Q63V41|CLPP_BURPS ATP-dependent Clp protease proteolytic subu... 137 4e-32

>sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic
subunit 4, chloroplastic OS=Arabidopsis thaliana
GN=CLPP4 PE=1 SV=1
Length = 292

Score = 193 bits (491), Expect = 6e-49
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 15/171 (8%)
Frame = +1

Query: 190 ASSPFGHSNAVLSSDWALGSSPLSIQAPSG---------------SAQRPPDTDVMGLLL 324
+SS F N + L S PL +PS SA R ++DVMGLLL
Sbjct: 26 SSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLL 85

Query: 325 RQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCR 504
R+RIVFLG ++D+F ADAI+SQLLLLDA+DP KDI+LFINSPGG+ SA+MA+YD +QL R
Sbjct: 86 RERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVR 145

Query: 505 ADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
AD+STIA GIAASTA+I+L GTKGKRFAMPNTRIM+HQPL GASGQ IDV
Sbjct: 146 ADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDV 196


>sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic
subunit 3, chloroplastic OS=Arabidopsis thaliana
GN=CLPP3 PE=1 SV=1
Length = 309

Score = 153 bits (386), Expect = 9e-37
Identities = 76/148 (51%), Positives = 106/148 (71%), Gaps = 3/148 (2%)
Frame = +1

Query: 223 LSSDWALGSSPLSIQAPSGSAQRPP---DTDVMGLLLRQRIVFLGFNLDEFAADAIISQL 393
LSS+W + S SI + + S R P + D +LLRQRIVFLG +D+ AD +ISQL
Sbjct: 57 LSSNWDVSS--FSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQL 114

Query: 394 LLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGT 573
LLLDA+D +DI LFINSPGG+ +A M +YDA++ C+AD+ST+ G+AAS A +LA G+
Sbjct: 115 LLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGS 174

Query: 574 KGKRFAMPNTRIMLHQPLAGASGQVIDV 657
KGKR+ MPN+++M+HQPL A G+ ++
Sbjct: 175 KGKRYCMPNSKVMIHQPLGTAGGKATEM 202


>sp|Q3ANI8|CLPP1_SYNSC ATP-dependent Clp protease proteolytic
subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1
PE=3 SV=2
Length = 207

Score = 147 bits (370), Expect = 6e-35
Identities = 64/118 (54%), Positives = 92/118 (77%)
Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
D+ LLR+RI+FLG +D+ ADA+++Q+L L+A+DP KDI+++INSPGG+ +A +A+Y
Sbjct: 24 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIY 83

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
D +Q D+ TI +G+AAS A +L+GGTKGKR A+PN RIM+HQPL GA GQ +D+
Sbjct: 84 DTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDI 141


>sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic
subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1
Length = 240

Score = 146 bits (369), Expect = 8e-35
Identities = 66/118 (55%), Positives = 92/118 (77%)
Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
D+ LLR+RIVFLG +D+ AD+I++QLL L+A+DP KDI+L+INSPGG+ +A MA+Y
Sbjct: 53 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
D +Q D++TI FG+AAS A +L+GG +GKR A+P+ RIM+HQPL GA GQ +D+
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDI 170


>sp|Q3B0U1|CLPP2_SYNS9 ATP-dependent Clp protease proteolytic
subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2
PE=3 SV=1
Length = 207

Score = 146 bits (369), Expect = 8e-35
Identities = 63/118 (53%), Positives = 92/118 (77%)
Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
D+ LLR+RI+FLG +D+ ADA+++Q+L L+A+DP KDI++++NSPGG+ +A +A+Y
Sbjct: 24 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIY 83

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
D +Q D+ TI +G+AAS A +L+GGTKGKR A+PN RIM+HQPL GA GQ +D+
Sbjct: 84 DTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDI 141


>sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic
subunit 2 OS=Synechococcus elongatus (strain PCC 7942)
GN=clpP2 PE=3 SV=1
Length = 240

Score = 146 bits (369), Expect = 8e-35
Identities = 66/118 (55%), Positives = 92/118 (77%)
Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
D+ LLR+RIVFLG +D+ AD+I++QLL L+A+DP KDI+L+INSPGG+ +A MA+Y
Sbjct: 53 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
D +Q D++TI FG+AAS A +L+GG +GKR A+P+ RIM+HQPL GA GQ +D+
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDI 170


>sp|A8F754|CLPP_THELT ATP-dependent Clp protease proteolytic subunit
OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385
/ TMO) GN=clpP PE=3 SV=1
Length = 199

Score = 146 bits (368), Expect = 1e-34
Identities = 68/118 (57%), Positives = 92/118 (77%)
Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
D+ LL+ RIVFLG+ +D+ A+ +++QLL L+A+DP KDI+L+INSPGG+ +A +A+Y
Sbjct: 23 DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVTAGLAIY 82

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
D +Q ++D+ TI G AAS AA++LA GTKGKRFA+PN RIMLHQPL GA G V DV
Sbjct: 83 DTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQPLGGAEGPVKDV 140


>sp|Q7V992|CLPP1_PROMM ATP-dependent Clp protease proteolytic
subunit 1 OS=Prochlorococcus marinus (strain MIT 9313)
GN=clpP1 PE=3 SV=1
Length = 224

Score = 146 bits (368), Expect = 1e-34
Identities = 64/118 (54%), Positives = 91/118 (77%)
Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
D+ LLR+RI+FLG +D+ ADA+++Q+L L+A+DP KDI+++INSPGG+ +A +A+Y
Sbjct: 41 DIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIY 100

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
D +Q D+ TI +G+AAS A +L GGTKGKR A+PN RIM+HQPL GA GQ +D+
Sbjct: 101 DTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQPLGGAQGQAVDI 158


>sp|Q59993|CLPP2_SYNY3 ATP-dependent Clp protease proteolytic
subunit 2 OS=Synechocystis sp. (strain PCC 6803)
GN=clpP2 PE=3 SV=1
Length = 226

Score = 145 bits (367), Expect = 1e-34
Identities = 73/154 (47%), Positives = 106/154 (68%)
Frame = +1

Query: 196 SPFGHSNAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLDEFAAD 375
SP+ + L + P+ ++ SG +R D+ LLR+RI+FLG +D+ AD
Sbjct: 6 SPYRSPLSTLGGNNIQSVVPMVVEQ-SGMGERA--FDIYSRLLRERIIFLGTPVDDQVAD 62

Query: 376 AIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAI 555
+I++QLL LDA+DP KDI+L+INSPGG+ A +A+YD +Q R D+ TI FG+AAS A
Sbjct: 63 SIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAF 122

Query: 556 VLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
+L+GG KGKR A+P++RIM+HQPL GA GQ +++
Sbjct: 123 LLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEI 156


>sp|Q8YQX8|CLPP2_ANASP ATP-dependent Clp protease proteolytic
subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=clpP2
PE=3 SV=1
Length = 232

Score = 145 bits (367), Expect = 1e-34
Identities = 77/163 (47%), Positives = 107/163 (65%)
Frame = +1

Query: 169 SSQHRFVASSPFGHSNAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLG 348
S+ H + S FG S+ + +G+ + SG +R D+ LLR+RI+FLG
Sbjct: 6 SANHSINSLSRFGMSSHLNG----IGNIVPMVVEQSGMGERA--FDIYSRLLRERIIFLG 59

Query: 349 FNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAF 528
+D+ A+ I++QLL LDA+D KDI+L+INSPGG+ A MA+YD IQ R D+ TI F
Sbjct: 60 TPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICF 119

Query: 529 GIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
G+AAS A +L GTKGKR ++P++RIM+HQPL GA GQ ID+
Sbjct: 120 GLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDI 162


tr_hit_id A9NTR6
Definition tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic subunit OS=Picea sitchensis
Align length 161
Score (bit) 207.0
E-value 6.0e-52
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952365|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_O07, 5'
(658 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic su... 207 6e-52
tr|A9PA38|A9PA38_POPTR ATP-dependent Clp protease proteolytic su... 199 1e-49
tr|A7PJQ1|A7PJQ1_VITVI ATP-dependent Clp protease proteolytic su... 197 6e-49
tr|A9TZR6|A9TZR6_PHYPA ATP-dependent Clp protease proteolytic su... 190 6e-47
tr|Q9FRM4|Q9FRM4_ORYSA ATP-dependent Clp protease proteolytic su... 183 9e-45
tr|Q7XBR2|Q7XBR2_ORYSJ ATP-dependent Clp protease proteolytic su... 183 9e-45
tr|B4FP39|B4FP39_MAIZE ATP-dependent Clp protease proteolytic su... 180 8e-44
tr|A9RE44|A9RE44_PHYPA ATP-dependent Clp protease proteolytic su... 179 1e-43
tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic su... 169 1e-40
tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic su... 168 2e-40
tr|A9NRW7|A9NRW7_PICSI ATP-dependent Clp protease proteolytic su... 168 2e-40
tr|A8IJ60|A8IJ60_CHLRE ATP-dependent Clp protease proteolytic su... 167 5e-40
tr|Q5QMT1|Q5QMT1_ORYSJ Putative ATP-dependent Clp protease, prot... 166 9e-40
tr|Q0JMF9|Q0JMF9_ORYSJ ATP-dependent Clp protease proteolytic su... 166 9e-40
tr|A2WQJ7|A2WQJ7_ORYSI ATP-dependent Clp protease proteolytic su... 166 9e-40
tr|A9T6I1|A9T6I1_PHYPA ATP-dependent Clp protease proteolytic su... 165 3e-39
tr|B7FH45|B7FH45_MEDTR Putative uncharacterized protein OS=Medic... 164 6e-39
tr|A7PR54|A7PR54_VITVI ATP-dependent Clp protease proteolytic su... 162 2e-38
tr|B6TBU2|B6TBU2_MAIZE ATP-dependent Clp protease proteolytic su... 160 8e-38
tr|Q019I1|Q019I1_OSTTA ATP-dependent Clp protease proteolytic su... 159 2e-37
tr|Q8W4Z1|Q8W4Z1_BRAOL ATP-dependent Clp protease proteolytic su... 157 5e-37
tr|Q9M4F0|Q9M4F0_BRANA ATP-dependent Clp protease proteolytic su... 156 1e-36
tr|Q93YL4|Q93YL4_BRANA ATP-dependent Clp protease proteolytic su... 156 1e-36
tr|A4RXD2|A4RXD2_OSTLU ATP-dependent Clp protease proteolytic su... 156 1e-36
tr|Q9ST19|Q9ST19_BRACM ATP-dependent Clp protease proteolytic su... 154 5e-36
tr|Q79CM2|Q79CM2_SYNE7 ATP-dependent Clp protease proteolytic su... 150 9e-35
tr|Q4C1E0|Q4C1E0_CROWT ATP-dependent Clp protease proteolytic su... 148 3e-34
tr|Q05UN0|Q05UN0_9SYNE ATP-dependent Clp protease proteolytic su... 147 4e-34
tr|A3IU92|A3IU92_9CHRO ATP-dependent Clp protease proteolytic su... 147 6e-34
tr|A5GQ10|A5GQ10_SYNR3 ATP-dependent Clp protease proteolytic su... 147 7e-34

>tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic
subunit OS=Picea sitchensis PE=2 SV=1
Length = 317

Score = 207 bits (526), Expect = 6e-52
Identities = 109/161 (67%), Positives = 127/161 (78%), Gaps = 2/161 (1%)
Frame = +1

Query: 181 RFVASSPFGHSNAVLSSDWAL--GSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFN 354
R V+SS G + WA G ++ Q P+ SAQR D DVMGLLLRQRIVFLG N
Sbjct: 62 RLVSSSGRGFKSRAYIDAWAAATGGGVIAQQTPA-SAQRSADGDVMGLLLRQRIVFLGSN 120

Query: 355 LDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGI 534
+D+F ADAIISQLLLLDAQ+P KDIRLFIN PGG+ +A+M ++D IQLCRAD+STIAFG+
Sbjct: 121 MDDFVADAIISQLLLLDAQNPNKDIRLFINCPGGSINAAMGIFDTIQLCRADVSTIAFGL 180

Query: 535 AASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
AASTA+IVLAGG+KGKR AMPNTRIM+HQPL GASG IDV
Sbjct: 181 AASTASIVLAGGSKGKRLAMPNTRIMMHQPLGGASGSAIDV 221


>tr|A9PA38|A9PA38_POPTR ATP-dependent Clp protease proteolytic
subunit OS=Populus trichocarpa PE=2 SV=1
Length = 297

Score = 199 bits (507), Expect = 1e-49
Identities = 101/133 (75%), Positives = 115/133 (86%)
Frame = +1

Query: 259 SIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLF 438
S Q P+ S R +TD MGLLLR+RIVFLG N+D+F ADAIISQLLLLDAQDPTKDIRLF
Sbjct: 70 SPQTPATS-MRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLF 128

Query: 439 INSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLH 618
+N PGG+ SASMA+YD +QL RAD+STIA GI+ASTA+I+L GGTKGKRFAMPNTRIM+H
Sbjct: 129 VNCPGGSLSASMAIYDVVQLVRADVSTIALGISASTASIILGGGTKGKRFAMPNTRIMIH 188

Query: 619 QPLAGASGQVIDV 657
QPL GASGQ IDV
Sbjct: 189 QPLGGASGQAIDV 201


>tr|A7PJQ1|A7PJQ1_VITVI ATP-dependent Clp protease proteolytic
subunit OS=Vitis vinifera GN=GSVIVT00018829001 PE=3 SV=1
Length = 291

Score = 197 bits (500), Expect = 6e-49
Identities = 103/148 (69%), Positives = 121/148 (81%)
Frame = +1

Query: 214 NAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQL 393
++VL+ A GS Q P G R + D MGLLL++RIVFLG N+D+F ADAIISQL
Sbjct: 54 DSVLALPLAHGS-----QTP-GMGARGAEADAMGLLLKERIVFLGNNVDDFVADAIISQL 107

Query: 394 LLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGT 573
LLLDAQDPTKDIRLFINSPGG+ SA+MA+YD +QL RAD+ST+A GI+ASTA+I+L GGT
Sbjct: 108 LLLDAQDPTKDIRLFINSPGGSLSATMAIYDIVQLVRADVSTVALGISASTASIILGGGT 167

Query: 574 KGKRFAMPNTRIMLHQPLAGASGQVIDV 657
KGKRFAMPNTRIM+HQPL GASGQ IDV
Sbjct: 168 KGKRFAMPNTRIMIHQPLGGASGQAIDV 195


>tr|A9TZR6|A9TZR6_PHYPA ATP-dependent Clp protease proteolytic
subunit (Fragment) OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_5896 PE=3 SV=1
Length = 230

Score = 190 bits (483), Expect = 6e-47
Identities = 92/123 (74%), Positives = 108/123 (87%)
Frame = +1

Query: 289 RPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSA 468
R + DVMGL+L+QRIVFLG +D+F ADAI+SQLLLLDA DP K+IRLF+N PGG+ SA
Sbjct: 9 RSAEADVMGLMLKQRIVFLGHQMDDFVADAIVSQLLLLDAVDPNKEIRLFVNCPGGSISA 68

Query: 469 SMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQV 648
+MA++DAIQLCRAD+STI FG+AASTAAIVLAGGT GKR AMPN+RIM+HQPL GASGQ
Sbjct: 69 AMAIFDAIQLCRADVSTICFGLAASTAAIVLAGGTPGKRLAMPNSRIMMHQPLGGASGQA 128

Query: 649 IDV 657
IDV
Sbjct: 129 IDV 131


>tr|Q9FRM4|Q9FRM4_ORYSA ATP-dependent Clp protease proteolytic
subunit OS=Oryza sativa GN=OSJNBa0056G17.6 PE=3 SV=1
Length = 293

Score = 183 bits (464), Expect = 9e-45
Identities = 94/159 (59%), Positives = 117/159 (73%)
Frame = +1

Query: 181 RFVASSPFGHSNAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLD 360
R + +P ++A + W G S +P A DVMGLLLR+RIVFLG ++
Sbjct: 43 RLTSLNPPRAASAPSTPLWEAGVRAESSDSPGAGA----GGDVMGLLLRERIVFLGNEIE 98

Query: 361 EFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAA 540
+F ADA++SQLLLLDA DP DIRLF+NSPGG+ SA+MA+YD +QL RAD+STI GIA
Sbjct: 99 DFLADAVVSQLLLLDAVDPNSDIRLFVNSPGGSLSATMAIYDVMQLVRADVSTIGLGIAG 158

Query: 541 STAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
STA+I+L GGTKGKRFAMPNTRIM+HQP+ GASGQ +DV
Sbjct: 159 STASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDV 197


>tr|Q7XBR2|Q7XBR2_ORYSJ ATP-dependent Clp protease proteolytic
subunit OS=Oryza sativa subsp. japonica GN=Os10g0580800
PE=2 SV=1
Length = 293

Score = 183 bits (464), Expect = 9e-45
Identities = 94/159 (59%), Positives = 117/159 (73%)
Frame = +1

Query: 181 RFVASSPFGHSNAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLD 360
R + +P ++A + W G S +P A DVMGLLLR+RIVFLG ++
Sbjct: 43 RLTSLNPPRAASAPSTPLWEAGVRAESSDSPGAGA----GGDVMGLLLRERIVFLGNEIE 98

Query: 361 EFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAA 540
+F ADA++SQLLLLDA DP DIRLF+NSPGG+ SA+MA+YD +QL RAD+STI GIA
Sbjct: 99 DFLADAVVSQLLLLDAVDPNSDIRLFVNSPGGSLSATMAIYDVMQLVRADVSTIGLGIAG 158

Query: 541 STAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
STA+I+L GGTKGKRFAMPNTRIM+HQP+ GASGQ +DV
Sbjct: 159 STASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDV 197


>tr|B4FP39|B4FP39_MAIZE ATP-dependent Clp protease proteolytic
subunit 1 OS=Zea mays PE=2 SV=1
Length = 289

Score = 180 bits (456), Expect = 8e-44
Identities = 86/118 (72%), Positives = 103/118 (87%)
Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
DVMGLLLR+RIVFLG +++F ADA++SQLLLLDA DP DIRLF+NSPGG+ SA+MA+Y
Sbjct: 76 DVMGLLLRERIVFLGNEIEDFLADAVVSQLLLLDAIDPDSDIRLFVNSPGGSLSATMAIY 135

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
D +QL RAD+STI GIA STA+I+L GGTKGKRFAMPNTRIM+HQP+ GASGQ +DV
Sbjct: 136 DVMQLVRADVSTIGMGIAGSTASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDV 193


>tr|A9RE44|A9RE44_PHYPA ATP-dependent Clp protease proteolytic
subunit OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_64895 PE=3 SV=1
Length = 232

Score = 179 bits (454), Expect = 1e-43
Identities = 87/125 (69%), Positives = 106/125 (84%)
Frame = +1

Query: 283 AQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGAT 462
A + + DVMGL+L+QRIVFLG +D+F AD+IISQLLLLDA DP +DIRLFIN PGG+
Sbjct: 9 AMQSAEGDVMGLMLKQRIVFLGNQMDDFVADSIISQLLLLDAIDPKQDIRLFINCPGGSI 68

Query: 463 SASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASG 642
SA+M ++DA+QLC+ DISTI FG AASTAA++LA GTKGKR AMPN+RIM+HQP+ GASG
Sbjct: 69 SAAMGIFDAMQLCKCDISTICFGFAASTAALLLAAGTKGKRLAMPNSRIMMHQPMGGASG 128

Query: 643 QVIDV 657
Q IDV
Sbjct: 129 QAIDV 133


>tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic
subunit OS=Picea sitchensis PE=2 SV=1
Length = 341

Score = 169 bits (429), Expect = 1e-40
Identities = 95/202 (47%), Positives = 126/202 (62%), Gaps = 8/202 (3%)
Frame = +1

Query: 76 PLCPPVHGNRHQAQVLARASAGGWPGCQDLS-------SSQHRFVASSPFGHSNAVLSSD 234
P CP + Q+ + + S P C S S+ R A P G A+ SS
Sbjct: 23 PSCPSI-----QSAIFNKNSLSSPPCCFVCSCSSASHLGSRQRMQAVKPIG---ALSSSR 74

Query: 235 WALGSSPLSIQAPSGS-AQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQ 411
+L +S S+ S RP D D +LLRQRIVFLG +D+ +AD IISQLLLLD +
Sbjct: 75 GSLSASLDSVGTSSSLWMPRPEDLDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLE 134

Query: 412 DPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFA 591
D TKDI+LFINSPGG+ +A M +YDA++LC+AD+ST+ FG+AAS A +LA GT+GKRF
Sbjct: 135 DSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFC 194

Query: 592 MPNTRIMLHQPLAGASGQVIDV 657
MPN ++M+HQPL G G I++
Sbjct: 195 MPNAKVMIHQPLGGGGGSAIEM 216


>tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic
subunit (Fragment) OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_25674 PE=3 SV=1
Length = 205

Score = 168 bits (426), Expect = 2e-40
Identities = 78/119 (65%), Positives = 98/119 (82%)
Frame = +1

Query: 298 DTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMA 477
D D +LL+QRI+FLG +D+F+AD IISQLLLLDAQDPTKDI+LFINSPGG+ +A M
Sbjct: 3 DLDPATMLLQQRILFLGSQVDDFSADVIISQLLLLDAQDPTKDIKLFINSPGGSVTAGMG 62

Query: 478 VYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVID 654
+YDA++LC+AD+ST+ FG+AAS A +LA GTKGKR+ MPN R+M+HQPL GA G ID
Sbjct: 63 IYDAMKLCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNARVMIHQPLGGAGGTAID 121