NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952365
Clone id TST38A01NGRL0013_O07
Library
Length 658
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_O07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
ATGGTTTCACCTGTTCTACATCCGCCATCGTGCAGCGTATGCGGCAGCAGAATTTCAGCA
GCTGCGTCGCCGCGCCCATTATGCCCACCGGTCCATGGAAATCGTCACCAAGCTCAGGTT
CTTGCAAGGGCGAGTGCAGGAGGGTGGCCCGGTTGTCAAGATCTCTCTTCTTCTCAACAT
CGCTTTGTTGCGTCCTCGCCTTTCGGACACTCCAACGCAGTGCTAAGCTCAGATTGGGCT
CTTGGTTCCTCTCCTCTCAGCATTCAAGCCCCATCAGGGTCCGCCCAAAGGCCCCCTGAC
ACTGATGTCATGGGCCTTCTGCTCCGCCAGCGCATTGTCTTCCTCGGCTTCAACCTGGAT
GAGTTCGCTGCGGATGCCATCATCAGCCAGCTTCTGCTTCTTGATGCTCAAGACCCTACT
AAGGATATCCGCCTCTTCATTAACAGCCCCGGAGGTGCCACCAGTGCTTCCATGGCCGTG
TATGATGCTATTCAGCTGTGTCGTGCCGATATATCTACAATAGCATTCGGTATTGCGGCA
TCGACTGCTGCCATAGTGTTAGCAGGTGGAACAAAGGGGAAAAGGTTTGCGATGCCAAAC
ACGAGAATTATGCTTCATCAGCCATTAGCAGGTGCAAGTGGGCAAGTGATTGATGTGG
■■Homology search results ■■ -
sp_hit_id Q94B60
Definition sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana
Align length 171
Score (bit) 193.0
E-value 6.0e-49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952365|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_O07, 5'
         (658 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic sub...   193   6e-49
sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic sub...   153   9e-37
sp|Q3ANI8|CLPP1_SYNSC ATP-dependent Clp protease proteolytic sub...   147   6e-35
sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic sub...   146   8e-35
sp|Q3B0U1|CLPP2_SYNS9 ATP-dependent Clp protease proteolytic sub...   146   8e-35
sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic sub...   146   8e-35
sp|A8F754|CLPP_THELT ATP-dependent Clp protease proteolytic subu...   146   1e-34
sp|Q7V992|CLPP1_PROMM ATP-dependent Clp protease proteolytic sub...   146   1e-34
sp|Q59993|CLPP2_SYNY3 ATP-dependent Clp protease proteolytic sub...   145   1e-34
sp|Q8YQX8|CLPP2_ANASP ATP-dependent Clp protease proteolytic sub...   145   1e-34
sp|Q317Y6|CLPP4_PROM9 ATP-dependent Clp protease proteolytic sub...   144   3e-34
sp|Q7UA36|CLPP1_SYNPX ATP-dependent Clp protease proteolytic sub...   144   3e-34
sp|Q46ID4|CLPP3_PROMT ATP-dependent Clp protease proteolytic sub...   143   7e-34
sp|Q7V9L6|CLPP3_PROMA ATP-dependent Clp protease proteolytic sub...   143   7e-34
sp|Q3M726|CLPP3_ANAVT ATP-dependent Clp protease proteolytic sub...   143   7e-34
sp|Q8DLI2|CLPP1_THEEB ATP-dependent Clp protease proteolytic sub...   142   2e-33
sp|A5IJ91|CLPP_THEP1 ATP-dependent Clp protease proteolytic subu...   141   3e-33
sp|Q9WZF9|CLPP_THEMA ATP-dependent Clp protease proteolytic subu...   141   3e-33
sp|Q2RL31|CLPP_MOOTA ATP-dependent Clp protease proteolytic subu...   141   3e-33
sp|Q7UZK7|CLPP3_PROMP ATP-dependent Clp protease proteolytic sub...   141   3e-33
sp|Q5KVD9|CLPP_GEOKA ATP-dependent Clp protease proteolytic subu...   139   1e-32
sp|A4ISQ2|CLPP_GEOTN ATP-dependent Clp protease proteolytic subu...   139   2e-32
sp|Q0AWF0|CLPP_SYNWW ATP-dependent Clp protease proteolytic subu...   138   2e-32
sp|A4JF05|CLPP_BURVG ATP-dependent Clp protease proteolytic subu...   138   2e-32
sp|Q39FE8|CLPP_BURS3 ATP-dependent Clp protease proteolytic subu...   138   2e-32
sp|Q0BEF6|CLPP_BURCM ATP-dependent Clp protease proteolytic subu...   138   2e-32
sp|A0K847|CLPP_BURCH ATP-dependent Clp protease proteolytic subu...   138   2e-32
sp|Q1BH85|CLPP_BURCA ATP-dependent Clp protease proteolytic subu...   138   2e-32
sp|Q2SWQ6|CLPP_BURTA ATP-dependent Clp protease proteolytic subu...   137   4e-32
sp|Q63V41|CLPP_BURPS ATP-dependent Clp protease proteolytic subu...   137   4e-32

>sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic
           subunit 4, chloroplastic OS=Arabidopsis thaliana
           GN=CLPP4 PE=1 SV=1
          Length = 292

 Score =  193 bits (491), Expect = 6e-49
 Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 15/171 (8%)
 Frame = +1

Query: 190 ASSPFGHSNAVLSSDWALGSSPLSIQAPSG---------------SAQRPPDTDVMGLLL 324
           +SS F   N +      L S PL   +PS                SA R  ++DVMGLLL
Sbjct: 26  SSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLL 85

Query: 325 RQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCR 504
           R+RIVFLG ++D+F ADAI+SQLLLLDA+DP KDI+LFINSPGG+ SA+MA+YD +QL R
Sbjct: 86  RERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVR 145

Query: 505 ADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           AD+STIA GIAASTA+I+L  GTKGKRFAMPNTRIM+HQPL GASGQ IDV
Sbjct: 146 ADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDV 196


>sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic
           subunit 3, chloroplastic OS=Arabidopsis thaliana
           GN=CLPP3 PE=1 SV=1
          Length = 309

 Score =  153 bits (386), Expect = 9e-37
 Identities = 76/148 (51%), Positives = 106/148 (71%), Gaps = 3/148 (2%)
 Frame = +1

Query: 223 LSSDWALGSSPLSIQAPSGSAQRPP---DTDVMGLLLRQRIVFLGFNLDEFAADAIISQL 393
           LSS+W + S   SI + + S  R P   + D   +LLRQRIVFLG  +D+  AD +ISQL
Sbjct: 57  LSSNWDVSS--FSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQL 114

Query: 394 LLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGT 573
           LLLDA+D  +DI LFINSPGG+ +A M +YDA++ C+AD+ST+  G+AAS  A +LA G+
Sbjct: 115 LLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGS 174

Query: 574 KGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           KGKR+ MPN+++M+HQPL  A G+  ++
Sbjct: 175 KGKRYCMPNSKVMIHQPLGTAGGKATEM 202


>sp|Q3ANI8|CLPP1_SYNSC ATP-dependent Clp protease proteolytic
           subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1
           PE=3 SV=2
          Length = 207

 Score =  147 bits (370), Expect = 6e-35
 Identities = 64/118 (54%), Positives = 92/118 (77%)
 Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
           D+   LLR+RI+FLG  +D+  ADA+++Q+L L+A+DP KDI+++INSPGG+ +A +A+Y
Sbjct: 24  DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIY 83

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           D +Q    D+ TI +G+AAS  A +L+GGTKGKR A+PN RIM+HQPL GA GQ +D+
Sbjct: 84  DTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDI 141


>sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic
           subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC
           6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1
          Length = 240

 Score =  146 bits (369), Expect = 8e-35
 Identities = 66/118 (55%), Positives = 92/118 (77%)
 Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
           D+   LLR+RIVFLG  +D+  AD+I++QLL L+A+DP KDI+L+INSPGG+ +A MA+Y
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           D +Q    D++TI FG+AAS  A +L+GG +GKR A+P+ RIM+HQPL GA GQ +D+
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDI 170


>sp|Q3B0U1|CLPP2_SYNS9 ATP-dependent Clp protease proteolytic
           subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2
           PE=3 SV=1
          Length = 207

 Score =  146 bits (369), Expect = 8e-35
 Identities = 63/118 (53%), Positives = 92/118 (77%)
 Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
           D+   LLR+RI+FLG  +D+  ADA+++Q+L L+A+DP KDI++++NSPGG+ +A +A+Y
Sbjct: 24  DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIY 83

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           D +Q    D+ TI +G+AAS  A +L+GGTKGKR A+PN RIM+HQPL GA GQ +D+
Sbjct: 84  DTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDI 141


>sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic
           subunit 2 OS=Synechococcus elongatus (strain PCC 7942)
           GN=clpP2 PE=3 SV=1
          Length = 240

 Score =  146 bits (369), Expect = 8e-35
 Identities = 66/118 (55%), Positives = 92/118 (77%)
 Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
           D+   LLR+RIVFLG  +D+  AD+I++QLL L+A+DP KDI+L+INSPGG+ +A MA+Y
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           D +Q    D++TI FG+AAS  A +L+GG +GKR A+P+ RIM+HQPL GA GQ +D+
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDI 170


>sp|A8F754|CLPP_THELT ATP-dependent Clp protease proteolytic subunit
           OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385
           / TMO) GN=clpP PE=3 SV=1
          Length = 199

 Score =  146 bits (368), Expect = 1e-34
 Identities = 68/118 (57%), Positives = 92/118 (77%)
 Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
           D+   LL+ RIVFLG+ +D+  A+ +++QLL L+A+DP KDI+L+INSPGG+ +A +A+Y
Sbjct: 23  DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVTAGLAIY 82

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           D +Q  ++D+ TI  G AAS AA++LA GTKGKRFA+PN RIMLHQPL GA G V DV
Sbjct: 83  DTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQPLGGAEGPVKDV 140


>sp|Q7V992|CLPP1_PROMM ATP-dependent Clp protease proteolytic
           subunit 1 OS=Prochlorococcus marinus (strain MIT 9313)
           GN=clpP1 PE=3 SV=1
          Length = 224

 Score =  146 bits (368), Expect = 1e-34
 Identities = 64/118 (54%), Positives = 91/118 (77%)
 Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
           D+   LLR+RI+FLG  +D+  ADA+++Q+L L+A+DP KDI+++INSPGG+ +A +A+Y
Sbjct: 41  DIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIY 100

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           D +Q    D+ TI +G+AAS  A +L GGTKGKR A+PN RIM+HQPL GA GQ +D+
Sbjct: 101 DTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQPLGGAQGQAVDI 158


>sp|Q59993|CLPP2_SYNY3 ATP-dependent Clp protease proteolytic
           subunit 2 OS=Synechocystis sp. (strain PCC 6803)
           GN=clpP2 PE=3 SV=1
          Length = 226

 Score =  145 bits (367), Expect = 1e-34
 Identities = 73/154 (47%), Positives = 106/154 (68%)
 Frame = +1

Query: 196 SPFGHSNAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLDEFAAD 375
           SP+    + L  +      P+ ++  SG  +R    D+   LLR+RI+FLG  +D+  AD
Sbjct: 6   SPYRSPLSTLGGNNIQSVVPMVVEQ-SGMGERA--FDIYSRLLRERIIFLGTPVDDQVAD 62

Query: 376 AIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAI 555
           +I++QLL LDA+DP KDI+L+INSPGG+  A +A+YD +Q  R D+ TI FG+AAS  A 
Sbjct: 63  SIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAF 122

Query: 556 VLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           +L+GG KGKR A+P++RIM+HQPL GA GQ +++
Sbjct: 123 LLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEI 156


>sp|Q8YQX8|CLPP2_ANASP ATP-dependent Clp protease proteolytic
           subunit 2 OS=Anabaena sp. (strain PCC 7120) GN=clpP2
           PE=3 SV=1
          Length = 232

 Score =  145 bits (367), Expect = 1e-34
 Identities = 77/163 (47%), Positives = 107/163 (65%)
 Frame = +1

Query: 169 SSQHRFVASSPFGHSNAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLG 348
           S+ H   + S FG S+ +      +G+    +   SG  +R    D+   LLR+RI+FLG
Sbjct: 6   SANHSINSLSRFGMSSHLNG----IGNIVPMVVEQSGMGERA--FDIYSRLLRERIIFLG 59

Query: 349 FNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAF 528
             +D+  A+ I++QLL LDA+D  KDI+L+INSPGG+  A MA+YD IQ  R D+ TI F
Sbjct: 60  TPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICF 119

Query: 529 GIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           G+AAS  A +L  GTKGKR ++P++RIM+HQPL GA GQ ID+
Sbjct: 120 GLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDI 162
tr_hit_id A9NTR6
Definition tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic subunit OS=Picea sitchensis
Align length 161
Score (bit) 207.0
E-value 6.0e-52
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952365|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_O07, 5'
         (658 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic su...   207   6e-52
tr|A9PA38|A9PA38_POPTR ATP-dependent Clp protease proteolytic su...   199   1e-49
tr|A7PJQ1|A7PJQ1_VITVI ATP-dependent Clp protease proteolytic su...   197   6e-49
tr|A9TZR6|A9TZR6_PHYPA ATP-dependent Clp protease proteolytic su...   190   6e-47
tr|Q9FRM4|Q9FRM4_ORYSA ATP-dependent Clp protease proteolytic su...   183   9e-45
tr|Q7XBR2|Q7XBR2_ORYSJ ATP-dependent Clp protease proteolytic su...   183   9e-45
tr|B4FP39|B4FP39_MAIZE ATP-dependent Clp protease proteolytic su...   180   8e-44
tr|A9RE44|A9RE44_PHYPA ATP-dependent Clp protease proteolytic su...   179   1e-43
tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic su...   169   1e-40
tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic su...   168   2e-40
tr|A9NRW7|A9NRW7_PICSI ATP-dependent Clp protease proteolytic su...   168   2e-40
tr|A8IJ60|A8IJ60_CHLRE ATP-dependent Clp protease proteolytic su...   167   5e-40
tr|Q5QMT1|Q5QMT1_ORYSJ Putative ATP-dependent Clp protease, prot...   166   9e-40
tr|Q0JMF9|Q0JMF9_ORYSJ ATP-dependent Clp protease proteolytic su...   166   9e-40
tr|A2WQJ7|A2WQJ7_ORYSI ATP-dependent Clp protease proteolytic su...   166   9e-40
tr|A9T6I1|A9T6I1_PHYPA ATP-dependent Clp protease proteolytic su...   165   3e-39
tr|B7FH45|B7FH45_MEDTR Putative uncharacterized protein OS=Medic...   164   6e-39
tr|A7PR54|A7PR54_VITVI ATP-dependent Clp protease proteolytic su...   162   2e-38
tr|B6TBU2|B6TBU2_MAIZE ATP-dependent Clp protease proteolytic su...   160   8e-38
tr|Q019I1|Q019I1_OSTTA ATP-dependent Clp protease proteolytic su...   159   2e-37
tr|Q8W4Z1|Q8W4Z1_BRAOL ATP-dependent Clp protease proteolytic su...   157   5e-37
tr|Q9M4F0|Q9M4F0_BRANA ATP-dependent Clp protease proteolytic su...   156   1e-36
tr|Q93YL4|Q93YL4_BRANA ATP-dependent Clp protease proteolytic su...   156   1e-36
tr|A4RXD2|A4RXD2_OSTLU ATP-dependent Clp protease proteolytic su...   156   1e-36
tr|Q9ST19|Q9ST19_BRACM ATP-dependent Clp protease proteolytic su...   154   5e-36
tr|Q79CM2|Q79CM2_SYNE7 ATP-dependent Clp protease proteolytic su...   150   9e-35
tr|Q4C1E0|Q4C1E0_CROWT ATP-dependent Clp protease proteolytic su...   148   3e-34
tr|Q05UN0|Q05UN0_9SYNE ATP-dependent Clp protease proteolytic su...   147   4e-34
tr|A3IU92|A3IU92_9CHRO ATP-dependent Clp protease proteolytic su...   147   6e-34
tr|A5GQ10|A5GQ10_SYNR3 ATP-dependent Clp protease proteolytic su...   147   7e-34

>tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic
           subunit OS=Picea sitchensis PE=2 SV=1
          Length = 317

 Score =  207 bits (526), Expect = 6e-52
 Identities = 109/161 (67%), Positives = 127/161 (78%), Gaps = 2/161 (1%)
 Frame = +1

Query: 181 RFVASSPFGHSNAVLSSDWAL--GSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFN 354
           R V+SS  G  +      WA   G   ++ Q P+ SAQR  D DVMGLLLRQRIVFLG N
Sbjct: 62  RLVSSSGRGFKSRAYIDAWAAATGGGVIAQQTPA-SAQRSADGDVMGLLLRQRIVFLGSN 120

Query: 355 LDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGI 534
           +D+F ADAIISQLLLLDAQ+P KDIRLFIN PGG+ +A+M ++D IQLCRAD+STIAFG+
Sbjct: 121 MDDFVADAIISQLLLLDAQNPNKDIRLFINCPGGSINAAMGIFDTIQLCRADVSTIAFGL 180

Query: 535 AASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           AASTA+IVLAGG+KGKR AMPNTRIM+HQPL GASG  IDV
Sbjct: 181 AASTASIVLAGGSKGKRLAMPNTRIMMHQPLGGASGSAIDV 221


>tr|A9PA38|A9PA38_POPTR ATP-dependent Clp protease proteolytic
           subunit OS=Populus trichocarpa PE=2 SV=1
          Length = 297

 Score =  199 bits (507), Expect = 1e-49
 Identities = 101/133 (75%), Positives = 115/133 (86%)
 Frame = +1

Query: 259 SIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLF 438
           S Q P+ S  R  +TD MGLLLR+RIVFLG N+D+F ADAIISQLLLLDAQDPTKDIRLF
Sbjct: 70  SPQTPATS-MRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLF 128

Query: 439 INSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLH 618
           +N PGG+ SASMA+YD +QL RAD+STIA GI+ASTA+I+L GGTKGKRFAMPNTRIM+H
Sbjct: 129 VNCPGGSLSASMAIYDVVQLVRADVSTIALGISASTASIILGGGTKGKRFAMPNTRIMIH 188

Query: 619 QPLAGASGQVIDV 657
           QPL GASGQ IDV
Sbjct: 189 QPLGGASGQAIDV 201


>tr|A7PJQ1|A7PJQ1_VITVI ATP-dependent Clp protease proteolytic
           subunit OS=Vitis vinifera GN=GSVIVT00018829001 PE=3 SV=1
          Length = 291

 Score =  197 bits (500), Expect = 6e-49
 Identities = 103/148 (69%), Positives = 121/148 (81%)
 Frame = +1

Query: 214 NAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQL 393
           ++VL+   A GS     Q P G   R  + D MGLLL++RIVFLG N+D+F ADAIISQL
Sbjct: 54  DSVLALPLAHGS-----QTP-GMGARGAEADAMGLLLKERIVFLGNNVDDFVADAIISQL 107

Query: 394 LLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGT 573
           LLLDAQDPTKDIRLFINSPGG+ SA+MA+YD +QL RAD+ST+A GI+ASTA+I+L GGT
Sbjct: 108 LLLDAQDPTKDIRLFINSPGGSLSATMAIYDIVQLVRADVSTVALGISASTASIILGGGT 167

Query: 574 KGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           KGKRFAMPNTRIM+HQPL GASGQ IDV
Sbjct: 168 KGKRFAMPNTRIMIHQPLGGASGQAIDV 195


>tr|A9TZR6|A9TZR6_PHYPA ATP-dependent Clp protease proteolytic
           subunit (Fragment) OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_5896 PE=3 SV=1
          Length = 230

 Score =  190 bits (483), Expect = 6e-47
 Identities = 92/123 (74%), Positives = 108/123 (87%)
 Frame = +1

Query: 289 RPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSA 468
           R  + DVMGL+L+QRIVFLG  +D+F ADAI+SQLLLLDA DP K+IRLF+N PGG+ SA
Sbjct: 9   RSAEADVMGLMLKQRIVFLGHQMDDFVADAIVSQLLLLDAVDPNKEIRLFVNCPGGSISA 68

Query: 469 SMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQV 648
           +MA++DAIQLCRAD+STI FG+AASTAAIVLAGGT GKR AMPN+RIM+HQPL GASGQ 
Sbjct: 69  AMAIFDAIQLCRADVSTICFGLAASTAAIVLAGGTPGKRLAMPNSRIMMHQPLGGASGQA 128

Query: 649 IDV 657
           IDV
Sbjct: 129 IDV 131


>tr|Q9FRM4|Q9FRM4_ORYSA ATP-dependent Clp protease proteolytic
           subunit OS=Oryza sativa GN=OSJNBa0056G17.6 PE=3 SV=1
          Length = 293

 Score =  183 bits (464), Expect = 9e-45
 Identities = 94/159 (59%), Positives = 117/159 (73%)
 Frame = +1

Query: 181 RFVASSPFGHSNAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLD 360
           R  + +P   ++A  +  W  G    S  +P   A      DVMGLLLR+RIVFLG  ++
Sbjct: 43  RLTSLNPPRAASAPSTPLWEAGVRAESSDSPGAGA----GGDVMGLLLRERIVFLGNEIE 98

Query: 361 EFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAA 540
           +F ADA++SQLLLLDA DP  DIRLF+NSPGG+ SA+MA+YD +QL RAD+STI  GIA 
Sbjct: 99  DFLADAVVSQLLLLDAVDPNSDIRLFVNSPGGSLSATMAIYDVMQLVRADVSTIGLGIAG 158

Query: 541 STAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           STA+I+L GGTKGKRFAMPNTRIM+HQP+ GASGQ +DV
Sbjct: 159 STASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDV 197


>tr|Q7XBR2|Q7XBR2_ORYSJ ATP-dependent Clp protease proteolytic
           subunit OS=Oryza sativa subsp. japonica GN=Os10g0580800
           PE=2 SV=1
          Length = 293

 Score =  183 bits (464), Expect = 9e-45
 Identities = 94/159 (59%), Positives = 117/159 (73%)
 Frame = +1

Query: 181 RFVASSPFGHSNAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLD 360
           R  + +P   ++A  +  W  G    S  +P   A      DVMGLLLR+RIVFLG  ++
Sbjct: 43  RLTSLNPPRAASAPSTPLWEAGVRAESSDSPGAGA----GGDVMGLLLRERIVFLGNEIE 98

Query: 361 EFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAA 540
           +F ADA++SQLLLLDA DP  DIRLF+NSPGG+ SA+MA+YD +QL RAD+STI  GIA 
Sbjct: 99  DFLADAVVSQLLLLDAVDPNSDIRLFVNSPGGSLSATMAIYDVMQLVRADVSTIGLGIAG 158

Query: 541 STAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           STA+I+L GGTKGKRFAMPNTRIM+HQP+ GASGQ +DV
Sbjct: 159 STASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDV 197


>tr|B4FP39|B4FP39_MAIZE ATP-dependent Clp protease proteolytic
           subunit 1 OS=Zea mays PE=2 SV=1
          Length = 289

 Score =  180 bits (456), Expect = 8e-44
 Identities = 86/118 (72%), Positives = 103/118 (87%)
 Frame = +1

Query: 304 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 483
           DVMGLLLR+RIVFLG  +++F ADA++SQLLLLDA DP  DIRLF+NSPGG+ SA+MA+Y
Sbjct: 76  DVMGLLLRERIVFLGNEIEDFLADAVVSQLLLLDAIDPDSDIRLFVNSPGGSLSATMAIY 135

Query: 484 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVIDV 657
           D +QL RAD+STI  GIA STA+I+L GGTKGKRFAMPNTRIM+HQP+ GASGQ +DV
Sbjct: 136 DVMQLVRADVSTIGMGIAGSTASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDV 193


>tr|A9RE44|A9RE44_PHYPA ATP-dependent Clp protease proteolytic
           subunit OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_64895 PE=3 SV=1
          Length = 232

 Score =  179 bits (454), Expect = 1e-43
 Identities = 87/125 (69%), Positives = 106/125 (84%)
 Frame = +1

Query: 283 AQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGAT 462
           A +  + DVMGL+L+QRIVFLG  +D+F AD+IISQLLLLDA DP +DIRLFIN PGG+ 
Sbjct: 9   AMQSAEGDVMGLMLKQRIVFLGNQMDDFVADSIISQLLLLDAIDPKQDIRLFINCPGGSI 68

Query: 463 SASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASG 642
           SA+M ++DA+QLC+ DISTI FG AASTAA++LA GTKGKR AMPN+RIM+HQP+ GASG
Sbjct: 69  SAAMGIFDAMQLCKCDISTICFGFAASTAALLLAAGTKGKRLAMPNSRIMMHQPMGGASG 128

Query: 643 QVIDV 657
           Q IDV
Sbjct: 129 QAIDV 133


>tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic
           subunit OS=Picea sitchensis PE=2 SV=1
          Length = 341

 Score =  169 bits (429), Expect = 1e-40
 Identities = 95/202 (47%), Positives = 126/202 (62%), Gaps = 8/202 (3%)
 Frame = +1

Query: 76  PLCPPVHGNRHQAQVLARASAGGWPGCQDLS-------SSQHRFVASSPFGHSNAVLSSD 234
           P CP +     Q+ +  + S    P C   S        S+ R  A  P G   A+ SS 
Sbjct: 23  PSCPSI-----QSAIFNKNSLSSPPCCFVCSCSSASHLGSRQRMQAVKPIG---ALSSSR 74

Query: 235 WALGSSPLSIQAPSGS-AQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQ 411
            +L +S  S+   S     RP D D   +LLRQRIVFLG  +D+ +AD IISQLLLLD +
Sbjct: 75  GSLSASLDSVGTSSSLWMPRPEDLDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLE 134

Query: 412 DPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFA 591
           D TKDI+LFINSPGG+ +A M +YDA++LC+AD+ST+ FG+AAS  A +LA GT+GKRF 
Sbjct: 135 DSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFC 194

Query: 592 MPNTRIMLHQPLAGASGQVIDV 657
           MPN ++M+HQPL G  G  I++
Sbjct: 195 MPNAKVMIHQPLGGGGGSAIEM 216


>tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic
           subunit (Fragment) OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_25674 PE=3 SV=1
          Length = 205

 Score =  168 bits (426), Expect = 2e-40
 Identities = 78/119 (65%), Positives = 98/119 (82%)
 Frame = +1

Query: 298 DTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMA 477
           D D   +LL+QRI+FLG  +D+F+AD IISQLLLLDAQDPTKDI+LFINSPGG+ +A M 
Sbjct: 3   DLDPATMLLQQRILFLGSQVDDFSADVIISQLLLLDAQDPTKDIKLFINSPGGSVTAGMG 62

Query: 478 VYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQPLAGASGQVID 654
           +YDA++LC+AD+ST+ FG+AAS  A +LA GTKGKR+ MPN R+M+HQPL GA G  ID
Sbjct: 63  IYDAMKLCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNARVMIHQPLGGAGGTAID 121