DK952381 |
Clone id |
TST38A01NGRL0013_O23 |
Library |
TST38 |
Length |
501 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_O23. 5' end sequence. |
Accession |
DK952381 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL142Contig1 |
Sequence |
GTGGAAGGTGGGAGAGCGAGTGCGGGCTGTGCGGCCAGAGGGTGACCTTGGTCCTTTGTA TGGGTTCACAGCTGGAGTTTACATTGCTCTCATGATGGCTCAAATTGAGGTCTTAAGGAA GAAAGGTCATTCTTACTCTGAGATGGTTAATGAGAGTGTCATCGAGGCTGTGGATTCATT GAATCCTTTTATGCATGCTCGTGGTGTGGCCTTCATGGTGGACAATTGCTCAACAACAGC TCGCCTGGGCTCTAGAAAGTGGGCTCCACGTTTCGATTATATCTTGACACAACAGGCGTT TGTGGATGTGGATGCAGAAGTTCCTGTCAACAAAGACCTCATCGGAAACTTCTTTTCGGA TCCTGTCCACAATGCCCTTGAAATTTGCTCTAAATTGAGGCCTACCCTTGACATAGCTGT GACTGCTGATGCTGATTTTGTCCGGCCAGAGTTGAGGCAGTAAGAGAATTATATTTTTCG GGTCCCTTGAGCCAATGGCGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q05758 |
Definition |
sp|Q05758|ILV5_ARATH Ketol-acid reductoisomerase, chloroplastic OS=Arabidopsis thaliana |
Align length |
156 |
Score (bit) |
267.0 |
E-value |
2.0e-71 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952381|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_O23, 5' (501 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q05758|ILV5_ARATH Ketol-acid reductoisomerase, chloroplastic ... 267 2e-71 sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, chloroplastic ... 265 7e-71 sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, chloroplastic OS... 264 2e-70 sp|P38674|ILV5_NEUCR Ketol-acid reductoisomerase, mitochondrial ... 70 4e-12 sp|P06168|ILV5_YEAST Ketol-acid reductoisomerase, mitochondrial ... 64 3e-10 sp|P78827|ILV5_SCHPO Probable ketol-acid reductoisomerase, mitoc... 64 3e-10 sp|O30126|SEPS_ARCFU O-phosphoseryl-tRNA(Cys) synthetase OS=Arch... 34 0.43 sp|O96650|TYSY_ASCSU Thymidylate synthase OS=Ascaris suum PE=2 SV=1 30 4.8 sp|Q3Z891|ILVC_DEHE1 Ketol-acid reductoisomerase OS=Dehalococcoi... 30 4.8 sp|Q9HP33|GUAAB_HALSA GMP synthase [glutamine-hydrolyzing] subun... 30 4.8 sp|Q1LPK6|SYK_RALME Lysyl-tRNA synthetase OS=Ralstonia metallidu... 30 6.3 sp|Q3ZXI2|ILVC_DEHSC Ketol-acid reductoisomerase OS=Dehalococcoi... 30 6.3 sp|A5FR44|ILVC_DEHSB Ketol-acid reductoisomerase OS=Dehalococcoi... 30 6.3 sp|P0AES5|GYRA_SHIFL DNA gyrase subunit A OS=Shigella flexneri G... 30 6.3 sp|P0AES4|GYRA_ECOLI DNA gyrase subunit A OS=Escherichia coli (s... 30 6.3 sp|Q5UPR4|YR776_MIMIV Uncharacterized protein R776 OS=Acanthamoe... 30 8.2 sp|Q473I5|SYK_RALEJ Lysyl-tRNA synthetase OS=Ralstonia eutropha ... 30 8.2 sp|Q6NG14|DNAJ1_CORDI Chaperone protein dnaJ 1 OS=Corynebacteriu... 30 8.2
>sp|Q05758|ILV5_ARATH Ketol-acid reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=At3g58610 PE=2 SV=2 Length = 591
Score = 267 bits (683), Expect = 2e-71 Identities = 127/156 (81%), Positives = 142/156 (91%) Frame = +2
Query: 2 WKVGERVRAVRPEGDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSEMVNESVIEAVDSL 181 WKVGERVR RP GDLGPLY FTAGVY+ALMMAQIE+LRKKGHSYSE++NESVIE+VDSL Sbjct: 436 WKVGERVRKSRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSL 495
Query: 182 NPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVDVDAEVPVNKDLIGNFFSD 361 NPFMHARGV+FMVDNCSTTARLGSRKWAPRFDYILTQQA V VD+ +N+DLI NFFSD Sbjct: 496 NPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDSGAAINRDLISNFFSD 555
Query: 362 PVHNALEICSKLRPTLDIAVTADADFVRPELRQ*EN 469 PVH A+E+C++LRPT+DI+V ADADFVRPELRQ N Sbjct: 556 PVHGAIEVCAQLRPTVDISVPADADFVRPELRQSSN 591
>sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, chloroplastic OS=Spinacia oleracea GN=AHRI PE=1 SV=1 Length = 595
Score = 265 bits (678), Expect = 7e-71 Identities = 125/153 (81%), Positives = 142/153 (92%) Frame = +2
Query: 2 WKVGERVRAVRPEGDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSEMVNESVIEAVDSL 181 WKVGE+VR+VRP GDLGPLY FTAGVY+ALMMAQIE+LRKKGHSYSE++NESVIEAVDSL Sbjct: 442 WKVGEKVRSVRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIEAVDSL 501
Query: 182 NPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVDVDAEVPVNKDLIGNFFSD 361 NPFMHARGV+FMVDNCSTTARLGSRKWAPRFDYIL+QQA V VD P+N+DLI NF SD Sbjct: 502 NPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILSQQALVAVDNGAPINQDLISNFLSD 561
Query: 362 PVHNALEICSKLRPTLDIAVTADADFVRPELRQ 460 PVH A+ +C++LRP++DI+VTADADFVRPELRQ Sbjct: 562 PVHEAIGVCAQLRPSVDISVTADADFVRPELRQ 594
>sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, chloroplastic OS=Pisum sativum GN=PGAAIR PE=2 SV=1 Length = 581
Score = 264 bits (674), Expect = 2e-70 Identities = 125/156 (80%), Positives = 142/156 (91%) Frame = +2
Query: 2 WKVGERVRAVRPEGDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSEMVNESVIEAVDSL 181 WKVGERVR+ RP GDLGPLY FTAGV++A+MMAQIEVLRKKGHSYSE++NESVIE+VDSL Sbjct: 426 WKVGERVRSTRPAGDLGPLYPFTAGVFVAMMMAQIEVLRKKGHSYSEIINESVIESVDSL 485
Query: 182 NPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVDVDAEVPVNKDLIGNFFSD 361 NPFMHARGV+FMVDNCSTTARLGSRKWAPRFDYILTQQA V VD+ P+N+DLI NF SD Sbjct: 486 NPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDSGAPINQDLISNFVSD 545
Query: 362 PVHNALEICSKLRPTLDIAVTADADFVRPELRQ*EN 469 PVH A+++C++LRPTLDI+V A ADFVRPELRQ N Sbjct: 546 PVHGAIQVCAELRPTLDISVPAAADFVRPELRQCSN 581
>sp|P38674|ILV5_NEUCR Ketol-acid reductoisomerase, mitochondrial OS=Neurospora crassa GN=ilv-2 PE=3 SV=2 Length = 402
Score = 70.5 bits (171), Expect = 4e-12 Identities = 38/78 (48%), Positives = 50/78 (64%) Frame = +2
Query: 41 GDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSEMVNESVIEAVDSLNPFMHARGVAFMV 220 G+ G L G G+++A Q EVLR++GHS SE NE+V EA SL P + A G+ +M Sbjct: 264 GERGCLMGGIHGMFLA----QYEVLRERGHSPSEAFNETVEEATQSLYPLIGAHGMDWMF 319
Query: 221 DNCSTTARLGSRKWAPRF 274 D CSTTAR G+ W P+F Sbjct: 320 DACSTTARRGAIDWTPKF 337
>sp|P06168|ILV5_YEAST Ketol-acid reductoisomerase, mitochondrial OS=Saccharomyces cerevisiae GN=ILV5 PE=1 SV=1 Length = 395
Score = 64.3 bits (155), Expect = 3e-10 Identities = 36/78 (46%), Positives = 47/78 (60%) Frame = +2
Query: 41 GDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSEMVNESVIEAVDSLNPFMHARGVAFMV 220 G+ G L G G+++A Q +VLR+ GHS SE NE+V EA SL P + G+ +M Sbjct: 258 GERGCLMGGIHGMFLA----QYDVLRENGHSPSEAFNETVEEATQSLYPLIGKYGMDYMY 313
Query: 221 DNCSTTARLGSRKWAPRF 274 D CSTTAR G+ W P F Sbjct: 314 DACSTTARRGALDWYPIF 331
>sp|P78827|ILV5_SCHPO Probable ketol-acid reductoisomerase, mitochondrial OS=Schizosaccharomyces pombe GN=ilv5 PE=1 SV=2 Length = 404
Score = 64.3 bits (155), Expect = 3e-10 Identities = 35/78 (44%), Positives = 48/78 (61%) Frame = +2
Query: 41 GDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSEMVNESVIEAVDSLNPFMHARGVAFMV 220 G+ G L G G+++A Q +VLR++GHS +E NE+V EA SL P + G+ +M Sbjct: 265 GERGCLMGGINGLFLA----QYQVLRERGHSPAEAFNETVEEATQSLYPLIGKYGLDYMF 320
Query: 221 DNCSTTARLGSRKWAPRF 274 CSTTAR G+ W PRF Sbjct: 321 AACSTTARRGAIDWTPRF 338
>sp|O30126|SEPS_ARCFU O-phosphoseryl-tRNA(Cys) synthetase OS=Archaeoglobus fulgidus GN=sepS PE=1 SV=1 Length = 534
Score = 33.9 bits (76), Expect = 0.43 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Frame = +2
Query: 2 WKVGERVRAVRPEGDLGPLYGFTAGVYIALMMAQIEVLRKKGHS--YSEMVNESVIEAVD 175 WK G+ + A R +L P GF+ G L A I+ LR+ S +SE+VN ++E V Sbjct: 20 WKAGKEILAERSPNELYPRVGFSFGKEHPL-FATIQRLREAYLSIGFSEVVNPLIVEDVH 78
Query: 176 SLNPFMHARGVAFMVDNCSTTARL 247 F R ++D C A L Sbjct: 79 VKKQF--GREALAVLDRCFYLATL 100
>sp|O96650|TYSY_ASCSU Thymidylate synthase OS=Ascaris suum PE=2 SV=1 Length = 294
Score = 30.4 bits (67), Expect = 4.8 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2
Query: 32 RPEGDLGPLYGF 67 RPEGDLGP+YGF Sbjct: 107 RPEGDLGPIYGF 118
>sp|Q3Z891|ILVC_DEHE1 Ketol-acid reductoisomerase OS=Dehalococcoides ethenogenes (strain 195) GN=ilvC PE=3 SV=1 Length = 332
Score = 30.4 bits (67), Expect = 4.8 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 4/126 (3%) Frame = +2
Query: 14 ERVRAVRPEGDLGPLYGFTAGVYIALMMAQIEVLRKKGHSYSEMVNESVIEAVDSLNPFM 193 E A E DL G +L+ A E L + G+ E+ + + + M Sbjct: 181 ETTFAEETETDLFGEQAVLCGGTTSLVKAGFETLVEAGYQ-PEVAYFECLHELKLIVDLM 239
Query: 194 HARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVDVDAEVP----VNKDLIGNFFSD 361 + G+A+M D+ S TA+ G PR T + ++ E+ + ++ N Sbjct: 240 YQGGIAYMRDSISDTAKYGDFTRGPRVINEETYETMGEILGEIQDGSFAKEWILENQAGR 299
Query: 362 PVHNAL 379 PV+N+L Sbjct: 300 PVYNSL 305
>sp|Q9HP33|GUAAB_HALSA GMP synthase [glutamine-hydrolyzing] subunit B OS=Halobacterium salinarium GN=guaAB PE=3 SV=1 Length = 305
Score = 30.4 bits (67), Expect = 4.8 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%) Frame = -3
Query: 451 LWPDKI----SISSHSYVKGRPQFRANFKGIVDRIRKEVSDEV 335 ++PD+I +I SH V G P+ R F+GIV+ +R DEV Sbjct: 128 IYPDRIESEGTIKSHHNVGGLPE-RVGFEGIVEPMRDLYKDEV 169
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6TF69 |
Definition |
tr|B6TF69|B6TF69_MAIZE Ketol-acid reductoisomerase OS=Zea mays |
Align length |
153 |
Score (bit) |
274.0 |
E-value |
2.0e-72 |
Report |
|