DK952435 |
Clone id |
TST38A01NGRL0014_B09 |
Library |
TST38 |
Length |
676 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_B09. 5' end sequence. |
Accession |
DK952435 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL670Contig1 |
Sequence |
AGCTTACATAAGGGAGAAGGATGGAGTACTTTCCAGGACCGGGGCGGAATCAACTCTTTG TGCCCGGGCCCGTCAATGTCCCAGAGCAAGTGCTGCGCGCAATGAACCGCAATAATGAGG ATTACCGCTCTCCAGCCATGCCCACTCTATCCAAGTCGGTCCTCGAGGATGTCAAGCGCA TATTCAAAACAACTGGGGCTACCTCCTTCATCATCCCAACCACAGGGACTGGGGCATGGG AAAGTGCATTGACAAACACACTGTCCCCAAGGGACAAGATCTTGACGTTTCGGCTCGGAC AATTTAGTCTCTTGTGGGTAGACCAGATGCAGAGGCTCAACTTTGATGTGGACGTGGTGG ATGTGGAATGGGGAGCTGGAATCGACCTCGGTGTGCTGCGAGACAAGCTTATTGCTGATT CTCACCATCAAATTAAAGCTGTGTGTGTGGTCCACAATGAGACTGCCACTGGTGTAACCA ATGATCTTGCTGGCATTCGAAATGTCCTCGATCGATGTAGGCATCCCGCCTTGTTCCTCG TGGATGGTGTGTCATCAATAGGCGCTTTGGATTTCCGGATGGATGAATGGGGGATTGATG TAACTCTTACGGGTTCGCAAAAGGCGCTGTCCCTCCCCACAGGACTTGGTATTATTTGTG CAAGCCCAAAGGCTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q56YA5 |
Definition |
sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana |
Align length |
218 |
Score (bit) |
341.0 |
E-value |
2.0e-93 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952435|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_B09, 5' (676 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arab... 341 2e-93 sp|O08374|SGAA_HYPME Serine--glyoxylate aminotransferase OS=Hyph... 239 1e-62 sp|P55819|SGAA_METEX Serine--glyoxylate aminotransferase OS=Meth... 210 5e-54 sp|P16421|DHSS_ANACY Soluble hydrogenase 42 kDa subunit OS=Anaba... 140 6e-33 sp|Q58369|Y959_METJA Uncharacterized aminotransferase MJ0959 OS=... 121 4e-27 sp|P14776|DHSS_SYNP1 Soluble hydrogenase, small subunit OS=Synec... 121 4e-27 sp|P43567|AGX1_YEAST Alanine--glyoxylate aminotransferase 1 OS=S... 111 3e-24 sp|O32148|PUCG_BACSU Purine catabolism protein pucG OS=Bacillus ... 104 4e-22 sp|P21549|SPYA_HUMAN Serine--pyruvate aminotransferase OS=Homo s... 93 1e-18 sp|O35423|SPYA_MOUSE Serine--pyruvate aminotransferase, mitochon... 88 5e-17 sp|P31030|SPYA_RABIT Serine--pyruvate aminotransferase OS=Orycto... 86 1e-16 sp|P09139|SPYA_RAT Serine--pyruvate aminotransferase, mitochondr... 86 2e-16 sp|Q5RDP0|SPYA_PONAB Serine--pyruvate aminotransferase OS=Pongo ... 86 2e-16 sp|Q54GT6|SPYA_DICDI Serine--pyruvate aminotransferase OS=Dictyo... 85 3e-16 sp|P31029|SPYA_CALJA Serine--pyruvate aminotransferase, mitochon... 81 4e-15 sp|P41689|SPYA_FELCA Serine--pyruvate aminotransferase, mitochon... 74 5e-13 sp|A6L4N0|PHNW_BACV8 2-aminoethylphosphonate--pyruvate transamin... 72 3e-12 sp|Q9KLY7|PHNW_VIBCH 2-aminoethylphosphonate--pyruvate transamin... 69 2e-11 sp|A5F049|PHNW_VIBC3 2-aminoethylphosphonate--pyruvate transamin... 69 2e-11 sp|Q7MF44|PHNW_VIBVY 2-aminoethylphosphonate--pyruvate transamin... 64 7e-10 sp|Q64PZ3|PHNW_BACFR 2-aminoethylphosphonate--pyruvate transamin... 64 9e-10 sp|Q8D3M4|PHNW_VIBVU 2-aminoethylphosphonate--pyruvate transamin... 63 2e-09 sp|Q87JL4|PHNW_VIBPA 2-aminoethylphosphonate--pyruvate transamin... 61 6e-09 sp|Q9ZLA7|Y736_HELPJ Uncharacterized aminotransferase jhp_0673 O... 60 8e-09 sp|Q5L9Q0|PHNW_BACFN 2-aminoethylphosphonate--pyruvate transamin... 60 8e-09 sp|P84187|SGAT_MAIZE Serine--glyoxylate aminotransferase (Fragme... 60 1e-08 sp|Q183T0|PHNXW_CLOD6 Bifunctional phosphonoacetaldehyde hydrola... 59 2e-08 sp|Q2T3K6|PHNW_BURTA 2-aminoethylphosphonate--pyruvate transamin... 59 2e-08 sp|Q9I434|PHNW_PSEAE 2-aminoethylphosphonate--pyruvate transamin... 58 4e-08 sp|Q1BQZ3|PHNW_BURCA 2-aminoethylphosphonate--pyruvate transamin... 58 4e-08
>sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2 Length = 401
Score = 341 bits (875), Expect = 2e-93 Identities = 159/218 (72%), Positives = 189/218 (86%) Frame = +3
Query: 21 MEYFPGPGRNQLFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVKRIFKTTGA 200 M+Y GPGR+ LFVPGPVN+PE V+RAMNRNNEDYRSPA+P L+K++LEDVK+IFKTT Sbjct: 1 MDYMYGPGRHHLFVPGPVNIPEPVIRAMNRNNEDYRSPAIPALTKTLLEDVKKIFKTTSG 60
Query: 201 TSFIIPTTGTGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAG 380 T F+ PTTGTGAWESALTNTLSP D+I++F +GQFSLLW+DQ +RLNF+VDVV+ +WG G Sbjct: 61 TPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQKRLNFNVDVVESDWGQG 120
Query: 381 IDLGVLRDKLIADSHHQIKAVCVVHNETATGVTNDLAGIRNVLDRCRHPALFLVDGVSSI 560 +L VL KL D +H IKA+C+VHNETATGVTND++ +R +LD +HPAL LVDGVSSI Sbjct: 121 ANLQVLASKLSQDENHTIKAICIVHNETATGVTNDISAVRTLLDHYKHPALLLVDGVSSI 180
Query: 561 GALDFRMDEWGIDVTLTGSQKALSLPTGLGIICASPKA 674 ALDFRMDEWG+DV LTGSQKALSLPTGLGI+CASPKA Sbjct: 181 CALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKA 218
>sp|O08374|SGAA_HYPME Serine--glyoxylate aminotransferase OS=Hyphomicrobium methylovorum GN=sgaA PE=3 SV=2 Length = 405
Score = 239 bits (610), Expect = 1e-62 Identities = 114/207 (55%), Positives = 144/207 (69%) Frame = +3
Query: 54 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVKRIFKTTGATSFIIPTTGTG 233 LF+PGP N+P+ V AMN ED RSP P + + ED+K+ FK FI P++GTG Sbjct: 7 LFIPGPTNIPDAVRMAMNIPMEDMRSPEFPKFTLPLFEDLKKAFKMKDGRVFIFPSSGTG 66
Query: 234 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRDKLI 413 AWESA+ NTL+ DK+L R GQFSLLWVD +RL V+V D EWG G+ + D L Sbjct: 67 AWESAVENTLATGDKVLMSRFGQFSLLWVDMCERLGLKVEVCDEEWGTGVPVEKYADILA 126
Query: 414 ADSHHQIKAVCVVHNETATGVTNDLAGIRNVLDRCRHPALFLVDGVSSIGALDFRMDEWG 593 D +H+IKAV V HNETATGV++D+AG+R LD +HPAL +VDGVSS+G+LD RM EWG Sbjct: 127 KDKNHEIKAVFVTHNETATGVSSDVAGVRKALDAAKHPALLMVDGVSSVGSLDMRMGEWG 186
Query: 594 IDVTLTGSQKALSLPTGLGIICASPKA 674 +D ++GSQK LPTGLGI+ S KA Sbjct: 187 VDCCVSGSQKGFMLPTGLGILAVSQKA 213
>sp|P55819|SGAA_METEX Serine--glyoxylate aminotransferase OS=Methylobacterium extorquens GN=sgaA PE=3 SV=1 Length = 379
Score = 210 bits (535), Expect = 5e-54 Identities = 105/212 (49%), Positives = 135/212 (63%) Frame = +3
Query: 39 PGRNQLFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVKRIFKTTGATSFIIP 218 PGRN LFVPGP N+P++V+RAM +ED+RS P+L+K + ED K++F +T T F+ P Sbjct: 2 PGRNHLFVPGPTNIPDRVMRAMMVQSEDHRSVDFPSLTKPLFEDTKKVFGSTEGTIFLFP 61
Query: 219 TTGTGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVL 398 +GTG WESAL+NTL+ DK+L R GQFS LW+D QRL DV V + EWG G + Sbjct: 62 ASGTGIWESALSNTLARGDKVLAARFGQFSHLWIDMAQRLGLDVVVQEEEWGTGAKPEKI 121
Query: 399 RDKLIADSHHQIKAVCVVHNETATGVTNDLAGIRNVLDRCRHPALFLVDGVSSIGALDFR 578 + L AD +H+IKAV VVHNETATGVT+++ +R +D HPAL V Sbjct: 122 EEALRADKNHEIKAVMVVHNETATGVTSNIGAVRKAIDAAGHPALLFV------------ 169
Query: 579 MDEWGIDVTLTGSQKALSLPTGLGIICASPKA 674 D + GSQK L LP GLG+IC S KA Sbjct: 170 ------DCAIAGSQKGLMLPAGLGVICVSQKA 195
>sp|P16421|DHSS_ANACY Soluble hydrogenase 42 kDa subunit OS=Anabaena cylindrica PE=1 SV=1 Length = 383
Score = 140 bits (353), Expect = 6e-33 Identities = 77/207 (37%), Positives = 118/207 (57%) Frame = +3
Query: 54 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVKRIFKTTGATSFIIPTTGTG 233 L +PGP VPE L A+ ++ +R+ + V +++K + +T ++ +GTG Sbjct: 7 LMIPGPTPVPEAALLALAKHPIGHRTSEFSNMMGEVTQNLKWLHQTESDV-LMLNVSGTG 65
Query: 234 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRDKLI 413 A E+ + N LSP D+IL G+F WV+ Q +V+ + EWG +D KL Sbjct: 66 AVEAGMINFLSPGDRILVGSNGKFGERWVEVGQAFGLNVEAITAEWGQPLDPDKFAQKLQ 125
Query: 414 ADSHHQIKAVCVVHNETATGVTNDLAGIRNVLDRCRHPALFLVDGVSSIGALDFRMDEWG 593 AD++ +IKAV + H+ET+TGV NDL I + + AL +VD V+S+GA + +D G Sbjct: 126 ADTNKEIKAVIITHSETSTGVINDLVAINSHVKE-HGQALIIVDAVTSLGAYNVPVDALG 184
Query: 594 IDVTLTGSQKALSLPTGLGIICASPKA 674 +DV +GSQK +P GLG + SPKA Sbjct: 185 LDVVASGSQKGYMIPPGLGFVSVSPKA 211
>sp|Q58369|Y959_METJA Uncharacterized aminotransferase MJ0959 OS=Methanocaldococcus jannaschii GN=MJ0959 PE=3 SV=1 Length = 385
Score = 121 bits (303), Expect = 4e-27 Identities = 75/207 (36%), Positives = 115/207 (55%) Frame = +3
Query: 54 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVKRIFKTTGATSFIIPTTGTG 233 L +PGP VP +VL AM +R+ L + +E +K++F T T F+I +GT Sbjct: 10 LMIPGPTMVPPEVLNAMALPVIGHRTKDYSNLLEDTIEKLKKVFITENDT-FLITGSGTA 68
Query: 234 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRDKLI 413 A + A++N + DK+L G F + + ++ + +DVEWG + +++ I Sbjct: 69 AMDMAISNIIKRGDKVLNIVTGNFGERFANIVKAYKGEAIRLDVEWGDMAEPEAVKE--I 126
Query: 414 ADSHHQIKAVCVVHNETATGVTNDLAGIRNVLDRCRHPALFLVDGVSSIGALDFRMDEWG 593 D + IKAV VVHNET+TG N + I V+ + AL++VD VSS+G +D++ Sbjct: 127 LDKYDDIKAVTVVHNETSTGARNPIKEIGEVVKD--YDALYIVDTVSSLGGDYVNVDKFH 184
Query: 594 IDVTLTGSQKALSLPTGLGIICASPKA 674 ID+ +TGSQK L+ P GL I S KA Sbjct: 185 IDICVTGSQKCLAAPPGLAAITVSEKA 211
>sp|P14776|DHSS_SYNP1 Soluble hydrogenase, small subunit OS=Synechococcus sp. (strain PCC 6716) PE=3 SV=1 Length = 384
Score = 121 bits (303), Expect = 4e-27 Identities = 71/209 (33%), Positives = 110/209 (52%), Gaps = 2/209 (0%) Frame = +3
Query: 54 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVKRIFKTTGATSFIIPTTGTG 233 L +PGP VPE VL ++ ++ +RS + ++ +K + +T I+ +GTG Sbjct: 7 LMIPGPTPVPESVLLSLGKHPIGHRSGEFSQIMAAMTAGIKWLHQTQNEV-LILAASGTG 65
Query: 234 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRDKLI 413 A E+ + N LS D+++ G+F W + + + WG ++ K + Sbjct: 66 AMEAGIINFLSAGDRVVVGCNGKFGDRWGEVCDAYGLTTERISAPWGQPLNPDDF--KAV 123
Query: 414 ADSHHQ--IKAVCVVHNETATGVTNDLAGIRNVLDRCRHPALFLVDGVSSIGALDFRMDE 587 D H Q KAV V H+ET+TGV NDL I + + AL +VD V+S+GA+ +DE Sbjct: 124 LDGHRQKPSKAVIVTHSETSTGVINDLEAINRHV-KAHGQALIIVDAVTSLGAVSVPIDE 182
Query: 588 WGIDVTLTGSQKALSLPTGLGIICASPKA 674 WG+DV +GSQK +P GL + SPKA Sbjct: 183 WGLDVVGSGSQKGYMIPPGLAFVSVSPKA 211
>sp|P43567|AGX1_YEAST Alanine--glyoxylate aminotransferase 1 OS=Saccharomyces cerevisiae GN=AGX1 PE=1 SV=1 Length = 385
Score = 111 bits (278), Expect = 3e-24 Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 8/212 (3%) Frame = +3
Query: 54 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVKRIFKTTGATS---FIIPTT 224 L +PGP+ + V +A++ + + SP ++ + VL++ + +FK+ A+ F++ + Sbjct: 8 LLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGS 67
Query: 225 GTGAWESALTNTL---SPRDKILTFRLGQFSLLWVDQMQRLNFDVDVV-DVEWGAGIDLG 392 GT W+ +N + +P +L G FS + D ++ VDVV ++ G + L Sbjct: 68 GTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLE 127
Query: 393 VLRDKLIADSHHQIKAVCVVHNETATGVTNDLAGIRNVLDRCRHPALFLVDGVSSIGALD 572 ++ +KL +S+ AV V H +T+T V +DL I + + F+VD V SIG + Sbjct: 128 LITEKLSQNSYG---AVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEE 184
Query: 573 FRMDEWGIDVTLTGSQKALSLPTGLGI-ICAS 665 F DEWG+D LT SQKA+ P GL I +C+S Sbjct: 185 FEFDEWGVDFALTASQKAIGAPAGLSISLCSS 216
>sp|O32148|PUCG_BACSU Purine catabolism protein pucG OS=Bacillus subtilis GN=pucG PE=2 SV=1 Length = 416
Score = 104 bits (260), Expect = 4e-22 Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 1/202 (0%) Frame = +3
Query: 54 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVKRIFKTTGATSFIIPTTGTG 233 + PGPV V +VLR M+ PA + +E ++ +F+T ++ I T Sbjct: 14 IMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRA 73
Query: 234 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRDKLI 413 E+ L + + P D +L G+F L + +R +V +++ EWG D D + Sbjct: 74 GIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFD---PEDIIR 130
Query: 414 ADSHHQIKAVCVVHNETATGVTNDLAGIRNVLDRCR-HPALFLVDGVSSIGALDFRMDEW 590 + K V +VH ET+TG + L I + CR ALF+VD V++IG + ++DEW Sbjct: 131 EIKKVKPKIVAMVHGETSTGRIHPLKAIG---EACRTEDALFIVDAVATIGGCEVKVDEW 187
Query: 591 GIDVTLTGSQKALSLPTGLGII 656 ID + G+QK LS+P+G+ I Sbjct: 188 KIDAAIGGTQKCLSVPSGMAPI 209
>sp|P21549|SPYA_HUMAN Serine--pyruvate aminotransferase OS=Homo sapiens GN=AGXT PE=1 SV=1 Length = 392
Score = 93.2 bits (230), Expect = 1e-18 Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 1/210 (0%) Frame = +3
Query: 48 NQLFV-PGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVKRIFKTTGATSFIIPTT 224 NQL + PGP N+P +++ A S M + + E ++ +F+T + +I + Sbjct: 22 NQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGS 81
Query: 225 GTGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRD 404 G A E+AL N L P D L G + VD +R+ V + + G L + + Sbjct: 82 GHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEE 141
Query: 405 KLIADSHHQIKAVCVVHNETATGVTNDLAGIRNVLDRCRHPALFLVDGVSSIGALDFRMD 584 L + H+ + + H E++TGV L G + R + L LVD V+S+G MD Sbjct: 142 GL---AQHKPVLLFLTHGESSTGVLQPLDGFGELCHR--YKCLLLVDSVASLGGTPLYMD 196
Query: 585 EWGIDVTLTGSQKALSLPTGLGIICASPKA 674 GID+ +GSQKAL+ P G +I S KA Sbjct: 197 RQGIDILYSGSQKALNAPPGTSLISFSDKA 226
>sp|O35423|SPYA_MOUSE Serine--pyruvate aminotransferase, mitochondrial OS=Mus musculus GN=Agxt PE=2 SV=2 Length = 413
Score = 87.8 bits (216), Expect = 5e-17 Identities = 59/207 (28%), Positives = 102/207 (49%) Frame = +3
Query: 54 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDVKRIFKTTGATSFIIPTTGTG 233 L PGP N+ +VL A + + M + + + + ++ +F+T + ++ +G Sbjct: 47 LLGPGPSNLAPRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHC 106
Query: 234 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGIDLGVLRDKLI 413 A E+AL N L P D LT G + + + R+ V + + G L + + L Sbjct: 107 AMETALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGL- 165
Query: 414 ADSHHQIKAVCVVHNETATGVTNDLAGIRNVLDRCRHPALFLVDGVSSIGALDFRMDEWG 593 + H+ + +VH E++TGV L G + R + L LVD V+S+G + MD+ G Sbjct: 166 --AQHKPVLLFLVHGESSTGVVQPLDGFGELCHR--YQCLLLVDSVASLGGVPIYMDQQG 221
Query: 594 IDVTLTGSQKALSLPTGLGIICASPKA 674 ID+ + SQK L+ P G+ +I + KA Sbjct: 222 IDIMYSSSQKVLNAPPGISLISFNDKA 248
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TY57 |
Definition |
tr|A9TY57|A9TY57_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
218 |
Score (bit) |
362.0 |
E-value |
2.0e-98 |
Report |
![](http://dbarchive.biosciencedbc.jp/images/togodb/expand.png) |