| DK952436 |
| Clone id |
TST38A01NGRL0014_B10 |
| Library |
TST38 |
| Length |
750 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_B10. 5' end sequence. |
| Accession |
DK952436 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL2870Contig1 |
| Sequence |
GGTTGATTGGCTTACGGACAAAATGAGAGCAAGAGATCATACAGTTTCGGCGACTCATGG
AGACATGGACCAAAATACCAGAGATATTATTATGAGGGAGTTCCGATCTGGATCTTCTCG
AGTGCTCATAACCACAGATCTTCTTGCTCGTGGGATTGACGTGCAGCAGGTTTCCCTTGT
TATCAATTATGATTTGCCTACCCAACCTGAGAACTATCTCCACAGAATTGGGCGGGGTGG
CCGCTTTGGTAGAAAGGGAGTGGCAATCAACTTTGTTACCAAAGACGATGAAAGGATGCT
GCAAGACATTCAAAGGTTTTACAATGTTGTGGTAGAGGAGCTACCATCTAATGTTGCAGA
TCTCATATAGGAGATATGTGCAGTGGTCAAGGGCTGGGGTCTTTTTCCCGATTTTATGCA
GGCTCCTGGCCAAGATTTTGTTTGGGCTAGAAGGAATAATGGTTTCTTGAGCAAATGCAA
GTTTTCGTCAGTCACATTATTGGGAGTCAATTATATCTAGTATTTTGTGCAATTATCCTT
CTTGATGGTTCGGGTCTGTCACTGCCCATTGCCTTCTTTATCATCAATGGCAGACTTGTA
TGTTGAGCTGGAAAGTGCCCTGTTTTGGAGTTTTGGTTTGTATTTCTGGATTTACCTGAC
TTCCATGGGGGCGCGATTTGGATTCCGCTTTTTTCCAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P41382 |
| Definition |
sp|P41382|IF410_TOBAC Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum |
| Align length |
122 |
| Score (bit) |
209.0 |
| E-value |
1.0e-53 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B8LRR8 |
| Definition |
tr|B8LRR8|B8LRR8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
122 |
| Score (bit) |
215.0 |
| E-value |
2.0e-54 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952436|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_B10, 5'
(696 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B8LRR8|B8LRR8_PICSI Putative uncharacterized protein OS=Picea... 215 2e-54
tr|A9SGN5|A9SGN5_PHYPA Predicted protein OS=Physcomitrella paten... 212 2e-53
tr|Q1WLT9|Q1WLT9_CHLIN Eukaryotic translation initiation factor ... 211 3e-53
tr|A9TZ99|A9TZ99_PHYPA Predicted protein OS=Physcomitrella paten... 211 3e-53
tr|A8IP17|A8IP17_CHLRE Eukaryotic initiation factor 4A-like prot... 211 3e-53
tr|A9SY53|A9SY53_PHYPA Predicted protein OS=Physcomitrella paten... 211 5e-53
tr|A7P4J8|A7P4J8_VITVI Chromosome chr4 scaffold_6, whole genome ... 211 5e-53
tr|A5BNE8|A5BNE8_VITVI Putative uncharacterized protein OS=Vitis... 211 5e-53
tr|A9P851|A9P851_POPTR Putative uncharacterized protein OS=Popul... 210 6e-53
tr|A9RVE1|A9RVE1_PHYPA Predicted protein OS=Physcomitrella paten... 209 1e-52
tr|A7P6N2|A7P6N2_VITVI Chromosome chr9 scaffold_7, whole genome ... 209 1e-52
tr|B8LMF4|B8LMF4_PICSI Putative uncharacterized protein OS=Picea... 208 3e-52
tr|B7EPR0|B7EPR0_ORYSJ cDNA clone:001-114-H08, full insert seque... 207 4e-52
tr|A7PE49|A7PE49_VITVI Chromosome chr11 scaffold_13, whole genom... 207 4e-52
tr|A2YGP5|A2YGP5_ORYSI Putative uncharacterized protein OS=Oryza... 207 4e-52
tr|A9PA36|A9PA36_POPTR Putative uncharacterized protein OS=Popul... 207 5e-52
tr|Q8H1A5|Q8H1A5_PEA DEAD box RNA helicase OS=Pisum sativum PE=2... 207 7e-52
tr|Q6T8C6|Q6T8C6_HELAN Initiation factor eIF4A-15 OS=Helianthus ... 207 7e-52
tr|B4FBK3|B4FBK3_MAIZE Eukaryotic initiation factor 4A OS=Zea ma... 207 7e-52
tr|A9PD17|A9PD17_POPTR Putative uncharacterized protein OS=Popul... 207 7e-52
tr|A8MRZ7|A8MRZ7_ARATH Uncharacterized protein At3g13920.3 OS=Ar... 207 7e-52
tr|B7EMF9|B7EMF9_ORYSJ cDNA clone:J033048E24, full insert sequen... 206 9e-52
tr|A2X0V4|A2X0V4_ORYSI Putative uncharacterized protein OS=Oryza... 206 9e-52
tr|A9PA53|A9PA53_POPTR Putative uncharacterized protein OS=Popul... 206 1e-51
tr|Q9SYS8|Q9SYS8_MAIZE Translation initiation factor 4A2 (Fragme... 206 1e-51
tr|Q9SE87|Q9SE87_BRAOL EIF4A protein (Fragment) OS=Brassica oler... 206 1e-51
tr|B7FJJ2|B7FJJ2_MEDTR Putative uncharacterized protein OS=Medic... 205 2e-51
tr|A2Q689|A2Q689_MEDTR Helicase, C-terminal OS=Medicago truncatu... 205 2e-51
tr|O24449|O24449_MAIZE Translational initiation factor eIF-4A OS... 204 6e-51
tr|O24558|O24558_MAIZE Translation initiation factor OS=Zea mays... 203 1e-50
>tr|B8LRR8|B8LRR8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 413
Score = 215 bits (547), Expect = 2e-54
Identities = 109/122 (89%), Positives = 110/122 (90%)
Frame = +2
Query: 2 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 181
VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV
Sbjct: 292 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 351
Query: 182 INYDLPTQPENYLHXXXXXXXXXXXXVAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD 361
INYDLPTQPENYLH VAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD
Sbjct: 352 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD 411
Query: 362 LI 367
L+
Sbjct: 412 LL 413
>tr|A9SGN5|A9SGN5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_233331 PE=3 SV=1
Length = 413
Score = 212 bits (539), Expect = 2e-53
Identities = 107/122 (87%), Positives = 109/122 (89%)
Frame = +2
Query: 2 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 181
VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV
Sbjct: 292 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 351
Query: 182 INYDLPTQPENYLHXXXXXXXXXXXXVAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD 361
INYDLPTQPENYLH VAINFVTK+DERMLQDIQRFYN VVEELPSNVAD
Sbjct: 352 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKEDERMLQDIQRFYNTVVEELPSNVAD 411
Query: 362 LI 367
L+
Sbjct: 412 LL 413
>tr|Q1WLT9|Q1WLT9_CHLIN Eukaryotic translation initiation factor
(Fragment) OS=Chlamydomonas incerta PE=2 SV=1
Length = 148
Score = 211 bits (538), Expect = 3e-53
Identities = 106/122 (86%), Positives = 108/122 (88%)
Frame = +2
Query: 2 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 181
VDWLTDKMR RDHTVSATHGDMDQNTRD+IMREFRSGSSRVLITTDLLARGIDVQQVSLV
Sbjct: 27 VDWLTDKMRERDHTVSATHGDMDQNTRDVIMREFRSGSSRVLITTDLLARGIDVQQVSLV 86
Query: 182 INYDLPTQPENYLHXXXXXXXXXXXXVAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD 361
INYDLPTQPENYLH VAINFVTKDDERMLQDIQRFYN V+EELPSNVAD
Sbjct: 87 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLQDIQRFYNTVIEELPSNVAD 146
Query: 362 LI 367
LI
Sbjct: 147 LI 148
>tr|A9TZ99|A9TZ99_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_226898 PE=3 SV=1
Length = 413
Score = 211 bits (538), Expect = 3e-53
Identities = 106/122 (86%), Positives = 109/122 (89%)
Frame = +2
Query: 2 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 181
VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV
Sbjct: 292 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 351
Query: 182 INYDLPTQPENYLHXXXXXXXXXXXXVAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD 361
INYDLPTQPENYLH VAINFVTK+DERMLQDIQRFYN V+EELPSNVAD
Sbjct: 352 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKEDERMLQDIQRFYNTVIEELPSNVAD 411
Query: 362 LI 367
L+
Sbjct: 412 LL 413
>tr|A8IP17|A8IP17_CHLRE Eukaryotic initiation factor 4A-like protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_188942 PE=4
SV=1
Length = 413
Score = 211 bits (538), Expect = 3e-53
Identities = 106/122 (86%), Positives = 108/122 (88%)
Frame = +2
Query: 2 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 181
VDWLTDKMR RDHTVSATHGDMDQNTRD+IMREFRSGSSRVLITTDLLARGIDVQQVSLV
Sbjct: 292 VDWLTDKMRERDHTVSATHGDMDQNTRDVIMREFRSGSSRVLITTDLLARGIDVQQVSLV 351
Query: 182 INYDLPTQPENYLHXXXXXXXXXXXXVAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD 361
INYDLPTQPENYLH VAINFVTKDDERMLQDIQRFYN V+EELPSNVAD
Sbjct: 352 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLQDIQRFYNTVIEELPSNVAD 411
Query: 362 LI 367
LI
Sbjct: 412 LI 413
>tr|A9SY53|A9SY53_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_107162 PE=3 SV=1
Length = 413
Score = 211 bits (536), Expect = 5e-53
Identities = 105/122 (86%), Positives = 109/122 (89%)
Frame = +2
Query: 2 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 181
VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV
Sbjct: 292 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 351
Query: 182 INYDLPTQPENYLHXXXXXXXXXXXXVAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD 361
INYDLPTQPENYLH VAINFVT+DD+RMLQDIQRFYN V+EELPSNVAD
Sbjct: 352 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLQDIQRFYNTVIEELPSNVAD 411
Query: 362 LI 367
L+
Sbjct: 412 LL 413
>tr|A7P4J8|A7P4J8_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032180001
PE=3 SV=1
Length = 413
Score = 211 bits (536), Expect = 5e-53
Identities = 107/122 (87%), Positives = 109/122 (89%)
Frame = +2
Query: 2 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 181
VDWLTDKMR+RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV
Sbjct: 292 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 351
Query: 182 INYDLPTQPENYLHXXXXXXXXXXXXVAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD 361
INYDLPTQPENYLH VAINFVTKDDERML DIQRFYNVVVEELPSNVAD
Sbjct: 352 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQRFYNVVVEELPSNVAD 411
Query: 362 LI 367
L+
Sbjct: 412 LL 413
>tr|A5BNE8|A5BNE8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_040122 PE=3 SV=1
Length = 413
Score = 211 bits (536), Expect = 5e-53
Identities = 107/122 (87%), Positives = 109/122 (89%)
Frame = +2
Query: 2 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 181
VDWLTDKMR+RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV
Sbjct: 292 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 351
Query: 182 INYDLPTQPENYLHXXXXXXXXXXXXVAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD 361
INYDLPTQPENYLH VAINFVTKDDERML DIQRFYNVVVEELPSNVAD
Sbjct: 352 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQRFYNVVVEELPSNVAD 411
Query: 362 LI 367
L+
Sbjct: 412 LL 413
>tr|A9P851|A9P851_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 413
Score = 210 bits (535), Expect = 6e-53
Identities = 106/122 (86%), Positives = 108/122 (88%)
Frame = +2
Query: 2 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 181
VDWLTDKMR+RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV
Sbjct: 292 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 351
Query: 182 INYDLPTQPENYLHXXXXXXXXXXXXVAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD 361
INYDLPTQPENYLH VAINFVTKDDERML DIQRFYNV VEELPSNVAD
Sbjct: 352 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDIQRFYNVTVEELPSNVAD 411
Query: 362 LI 367
L+
Sbjct: 412 LL 413
>tr|A9RVE1|A9RVE1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_119989 PE=3 SV=1
Length = 414
Score = 209 bits (533), Expect = 1e-52
Identities = 104/122 (85%), Positives = 109/122 (89%)
Frame = +2
Query: 2 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 181
VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV
Sbjct: 293 VDWLTDKMRARDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 352
Query: 182 INYDLPTQPENYLHXXXXXXXXXXXXVAINFVTKDDERMLQDIQRFYNVVVEELPSNVAD 361
INYDLPTQPENYLH VAINFVT+DD+RMLQDIQ+FYN V+EELPSNVAD
Sbjct: 353 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDDRMLQDIQKFYNTVIEELPSNVAD 412
Query: 362 LI 367
L+
Sbjct: 413 LL 414
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