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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952478
Clone id TST38A01NGRL0014_D04
Library
Length 795
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_D04. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GGTCCGTGTCTGCATCGCGAGGATGAAGGCGGGCGCCATTTCTGCAAACAAGGCTCCATG
AATGCTCTTGCGGGTGATGCAGAAGGCCTGTCTTGTCGTGTAGTTGAGGAGGAGCTGTAG
CCCCTAGCGTGATGGTTGTTGTGCAAGGCGTTCGATTCCTTTTGATGTGCATCCCGAGGA
TGAAGTCGGTCGTCATCTCTGTGAAGTAAGGCGAGATTAATGATGATGCAGAAGGGCTGC
GGTGTCCGGTTGTTGGGGATGCTCTAGCGCATAGGATGCCTCATGGGAGGGTCTTTTTCA
CCGTGTAGTTTTTTGTGCCTACAACGTTGCTGAGGATCTGCTATCTGGTGCTGCGAGCAA
TAGTGTGTGTGCTTGTATAAGAGGAGGCGGTTGCCTCTTTCTCTCTCCATCTGAGTCTGC
CTCTTTGTCTCCATATGAATGCGTGATAGCATCTAGAGTGTTGCTGCTAATGGCTTGAAA
CCAGGACAGTGGGAGTTCATGTGCTGGCGAAGCGGAAGAATGATGCATTAGCAATGGTGA
TTCTCTGGGTGCTCAGAGCATGGACTTGGAAGGGGGTGAGCTCCATTCGAAGTTTTTTTA
TTTGATGATTTGTAAATCTATTTTGGCCAAACTATTCCAGCATCTCTGTGTCACAATTTG
ATCTTTGAGCTTTATTGCACATTTTTTTTGTTCGTCTTTCCCTAGCAAAAAAAATGATAT
TAATACCCTGTTCCCCAAAAGGGTGGTGTTTTTTTTGGTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P13728
Definition sp|P13728|SGS3_DROYA Salivary glue protein Sgs-3 OS=Drosophila yakuba
Align length 102
Score (bit) 35.0
E-value 0.45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952478|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_D04, 5'
         (759 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13728|SGS3_DROYA Salivary glue protein Sgs-3 OS=Drosophila y...    35   0.45 
sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B OS=X...    35   0.58 
sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A (Fra...    34   1.00 
sp|Q21006|NHR34_CAEEL Nuclear hormone receptor family member nhr...    32   3.8  
sp|P13418|POLG_CRPV Genome polyprotein (Fragment) OS=Cricket par...    31   8.4  

>sp|P13728|SGS3_DROYA Salivary glue protein Sgs-3 OS=Drosophila
           yakuba GN=Sgs3 PE=2 SV=2
          Length = 263

 Score = 35.0 bits (79), Expect = 0.45
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
 Frame = -1

Query: 348 PDSRSSATL*AQKTTR*KRPSHEASYALEHPQQPDTAALLHHH*SRLTSQR*RPTSSSGC 169
           P +RS+ T    K+T  KRP+HE +   + P Q  T        +  T    +PT+  GC
Sbjct: 159 PTTRSTTTRHTTKSTTSKRPTHETTTTSKRPTQETTTTTRRATQATTTP---KPTNKPGC 215

Query: 168 TSK----GIERLAQQPSR*GLQLLLNYTTRQAFCITRKSIHG 55
             K    G       P R GL   LN   RQ     R+ + G
Sbjct: 216 GCKSCGPGGIPCGSCPKRQGLCTELNNLLRQLERRVRECVCG 257


>sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B
           OS=Xenopus laevis GN=rnf111-B PE=2 SV=1
          Length = 959

 Score = 34.7 bits (78), Expect = 0.58
 Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 18/112 (16%)
 Frame = -2

Query: 575 PLPSPCSEH-----PENHHC*CIILPLRQHMN-SHCPGFKPLAATL*MLSRIH------- 435
           PLPS  S H     P +HH      PL QH++ SH      ++AT  +  R+H       
Sbjct: 659 PLPSLTSTHAVPPPPPSHHLSAAAAPLPQHLSTSHQSMSHHISATAPVTQRLHAHEVIQR 718

Query: 434 METKRQTQME-----RERGNRLLLYKHTHYCSQHQIADPQQRCRHKKLHGEK 294
           ME +R+  M+      ER        H +Y   H I  PQ    H +   E+
Sbjct: 719 MEVQRRRMMQHPTRAHERPPPHPHRMHPNYGHGHHIHVPQTMSSHPRQGPER 770


>sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A
           (Fragment) OS=Xenopus laevis GN=rnf111-A PE=2 SV=1
          Length = 923

 Score = 33.9 bits (76), Expect = 1.00
 Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 18/112 (16%)
 Frame = -2

Query: 575 PLPSPCSEH-----PENHHC*CIILPLRQHMN-SHCPGFKPLAATL*MLSRIH------- 435
           PLPS  S H     P +HH      PL QH++ SH      ++AT     R+H       
Sbjct: 623 PLPSLTSTHAVPPPPPSHHLSAAAAPLPQHLSTSHQSMSHHISATAPATQRLHAHEVIQR 682

Query: 434 METKRQTQME-----RERGNRLLLYKHTHYCSQHQIADPQQRCRHKKLHGEK 294
           ME +R+  M+      ER        H +Y   H I  PQ    H +   E+
Sbjct: 683 MEVQRRRMMQHPTRAHERPPPHPHRMHPNYGHGHHIHVPQTMSSHPRQGPER 734


>sp|Q21006|NHR34_CAEEL Nuclear hormone receptor family member nhr-34
           OS=Caenorhabditis elegans GN=nhr-34 PE=2 SV=3
          Length = 631

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 114 AVAPSVMVVVQGVRFLLMCIPRMKSVVISVK*GEINDDAEGLRCPVVGDALAHR 275
           +VAP + +V + V F+    P+ + + + +  G +  +  GL+C V GD+ A R
Sbjct: 111 SVAPPLCIVPRSVEFIN---PKTEDMSMDIPMGNVQSEFTGLKCRVCGDSRAGR 161


>sp|P13418|POLG_CRPV Genome polyprotein (Fragment) OS=Cricket
           paralysis virus PE=1 SV=2
          Length = 895

 Score = 30.8 bits (68), Expect = 8.4
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
 Frame = -2

Query: 488 CPGFKPLAATL*MLSRIHMETKRQTQMERERGNRLLLYKHTHYCSQ---HQIADPQQRCR 318
           CP + P A  L +     +E +R  +      NR+     T  CS+     + + QQ  R
Sbjct: 591 CPSYVPYAGDLTLADTRKIEAERTQEYSNNEDNRI-----TTQCSRIVAQVMGEDQQIPR 645

Query: 317 HKKLHGEKDPPMRHPMR*S---IPNNRTPQPFCI 225
           ++  HG       HP+      I NN +PQ  CI
Sbjct: 646 NEAQHGV------HPISIDTHRISNNWSPQAMCI 673
tr_hit_id B6KDA0
Definition tr|B6KDA0|B6KDA0_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 54
Score (bit) 37.4
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952478|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_D04, 5'
         (759 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KDA0|B6KDA0_TOXGO Putative uncharacterized protein OS=Toxop...    37   1.1  
tr|Q6YVF9|Q6YVF9_ORYSJ Putative uncharacterized protein P0758B01...    36   2.5  
tr|A4HBI2|A4HBI2_LEIBR Putative uncharacterized protein OS=Leish...    36   2.5  
tr|B3P2W0|B3P2W0_DROER GG25249 OS=Drosophila erecta GN=GG25249 P...    36   3.2  
tr|Q4PCA3|Q4PCA3_USTMA Putative uncharacterized protein OS=Ustil...    35   5.4  
tr|Q1EP18|Q1EP18_MUSBA Protein kinase family protein OS=Musa bal...    35   5.5  
tr|B4PF55|B4PF55_DROYA Salivary gland secretion 3 OS=Drosophila ...    35   5.5  
tr|B8PBQ1|B8PBQ1_9APHY Predicted protein OS=Postia placenta Mad-...    35   5.5  

>tr|B6KDA0|B6KDA0_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_071770 PE=4 SV=1
          Length = 1672

 Score = 37.4 bits (85), Expect = 1.1
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
 Frame = -1

Query: 582 SSPPSKSML*APRESPLLMHHSSASP--AHELPLSWFQAISSNTLDAITHSYGD 427
           S+P S S L AP  S L  HHSS+SP  A + P+S+      ++LDA   S+GD
Sbjct: 396 SAPASTSALSAPPSSSL-SHHSSSSPSAASKSPVSFVHRYEQSSLDASIDSWGD 448


>tr|Q6YVF9|Q6YVF9_ORYSJ Putative uncharacterized protein P0758B01.19
           OS=Oryza sativa subsp. japonica GN=P0758B01.19 PE=4 SV=1
          Length = 153

 Score = 36.2 bits (82), Expect = 2.5
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 11/49 (22%)
 Frame = -1

Query: 444 THSYGDKEADSDGE----------RKRQP-PPLIQAHTLLLAAPDSRSS 331
           TH YGD++ D DG+          R+R P PP +    LLLA P S SS
Sbjct: 17  THPYGDRDGDGDGDRAGFPPQVGRRRRMPSPPRVVGLLLLLALPTSSSS 65


>tr|A4HBI2|A4HBI2_LEIBR Putative uncharacterized protein
           OS=Leishmania braziliensis GN=LbrM20_V2.4220 PE=4 SV=1
          Length = 1189

 Score = 36.2 bits (82), Expect = 2.5
 Identities = 24/73 (32%), Positives = 40/73 (54%)
 Frame = -1

Query: 549 PRESPLLMHHSSASPAHELPLSWFQAISSNTLDAITHSYGDKEADSDGERKRQPPPLIQA 370
           P   PL+   SSA+P  E P++   A+S+ +  A T + G+ ++   GE+KR+P     A
Sbjct: 431 PTLPPLVKAESSAAPTAESPVANRGALSAESA-AATANTGESDSSPAGEKKRRPGTAAPA 489

Query: 369 HTLLLAAPDSRSS 331
            +L L+  +  SS
Sbjct: 490 ASLPLSPRNGDSS 502


>tr|B3P2W0|B3P2W0_DROER GG25249 OS=Drosophila erecta GN=GG25249 PE=4
            SV=1
          Length = 941

 Score = 35.8 bits (81), Expect = 3.2
 Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
 Frame = -2

Query: 590  SNGAHPLPSPCSEHPENHHC*CIILP---LRQHMNSHCPGFKP-LAATL*MLSRIHMETK 423
            +NG  P P+P ++H  N+    + LP   +    N + P   P  AA    +  +H + +
Sbjct: 690  TNGPPPPPNP-AQHQRNN----LGLPPVSIAPSDNGYWPKVSPDSAAAANAMEVMHQQQQ 744

Query: 422  RQTQMERERGNRLLLYKHTHYCSQH-----QIADPQQRCRHKKLHGEKDPPMRHPM 270
            +Q Q ++++  +    +  H+  QH     Q   PQQ+ + +  H ++ PP +H M
Sbjct: 745  QQQQQQQQQQQQQQQQQAHHHHPQHGVPPQQHVPPQQQQQQQHHHPQQQPPPQHSM 800


>tr|Q4PCA3|Q4PCA3_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM02260.1 PE=4 SV=1
          Length = 1929

 Score = 35.0 bits (79), Expect = 5.4
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -2

Query: 140 NNHHARGYSSSSTTRQDRPSASP-ARAFMEPCLQKWRPPSSSR 15
           NNHHAR + S+  TR  +PS++P  R F  P +    P   +R
Sbjct: 154 NNHHARTHPSNDGTRTPKPSSTPKGRPFASPIITAATPQQPNR 196


>tr|Q1EP18|Q1EP18_MUSBA Protein kinase family protein OS=Musa
           balbisiana GN=MBP_91N22.78 PE=4 SV=1
          Length = 637

 Score = 35.0 bits (79), Expect = 5.5
 Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 1/120 (0%)
 Frame = -1

Query: 576 PPSKSML*APRESPLLMHHSSASPAHELPLSWFQAISSNTLDAITHSYGDKEADSDGERK 397
           PPS      P  SP   H + A P            SSN     T   G K   S G+  
Sbjct: 166 PPSP-----PSPSPSASHRAPADPISP---------SSNGSGIPTSDVGQKSGQSSGDGG 211

Query: 396 RQPPPLIQAHTLLLAAPDSRSSATL*AQKTTR*KRPS-HEASYALEHPQQPDTAALLHHH 220
            +  P +    +          A     +  R K P+ +E+ +A+  P Q  +A L+HHH
Sbjct: 212 MKAGPAVAVALVTAVVLLGLVGAITWIVRRKRRKPPANYESGFAMSSPYQSPSAPLVHHH 271


>tr|B4PF55|B4PF55_DROYA Salivary gland secretion 3 OS=Drosophila
           yakuba GN=Sgs3 PE=4 SV=1
          Length = 273

 Score = 35.0 bits (79), Expect = 5.5
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
 Frame = -1

Query: 348 PDSRSSATL*AQKTTR*KRPSHEASYALEHPQQPDTAALLHHH*SRLTSQR*RPTSSSGC 169
           P +RS+ T    K+T  KRP+HE +   + P Q  T        +  T    +PT+  GC
Sbjct: 169 PTTRSTTTRQTTKSTTSKRPTHETTTTSKRPTQETTTTTRRATQATTTP---KPTNKPGC 225

Query: 168 TSK----GIERLAQQPSR*GLQLLLNYTTRQAFCITRKSIHG 55
             K    G       P R GL   LN   RQ     R+ + G
Sbjct: 226 GCKSCGPGGIPCGSCPKRQGLCTELNNLLRQLERRVRECVCG 267


>tr|B8PBQ1|B8PBQ1_9APHY Predicted protein OS=Postia placenta
           Mad-698-R GN=POSPLDRAFT_98870 PE=4 SV=1
          Length = 1615

 Score = 35.0 bits (79), Expect = 5.5
 Identities = 25/94 (26%), Positives = 42/94 (44%)
 Frame = -1

Query: 549 PRESPLLMHHSSASPAHELPLSWFQAISSNTLDAITHSYGDKEADSDGERKRQPPPLIQA 370
           PR   +L+ HS+ SP H LP++   A     LD+      D +AD +G R      L+ +
Sbjct: 274 PRVFQMLITHSNRSPVHALPVALGHACERRDLDS------DADADKEGVRTHARMLLVPS 327

Query: 369 HTLLLAAPDSRSSATL*AQKTTR*KRPSHEASYA 268
              ++A    + S  +   ++ R    +  AS A
Sbjct: 328 VVGIVAVARHKGSLLIGTVRSVRPANANASASVA 361