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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952485
Clone id TST38A01NGRL0014_D11
Library
Length 666
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_D11. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CAAGTCGCAACAGCACATATTGCACTCTTCCCCGCAAGCGTTTCTCTCTGCAAGGAGTGT
CGCAATGGCAGCTGCCACAGTGCTCTCTTCCTCATTTGTGGGGCAAGCCTCTCTTCTGCG
GGAGAGCAATGAGCTGTCCAGCAGGGTAACGGCAGGCGAGGCCCGCGTGCAGATGAGGTC
CTCGAAGAAGTCGGCACCCTCGGGTAGCATCTGGTATGGCGCCGACCGCCCTCTCTACTT
GGGCCCTTTTTCAGGCTCTCCCCCATCCTACCTGACGGGTGAGTTCCCCGGTGACTACGG
CTGGGACACCGCCGGACTGTCCGCCGACCCTGAAACGTTCGCCAAGAACCGAGAACTAGA
GGTTATCCACGCCAGATGGGCCATGCTGGGCGCCCTGGGCTGCGTCACCCCTGAGCTGCT
GGCCAAGAACGGCGTCAAGTTCGGCGAGGCTGTCTGGTTCAAGGCCGGCTCTCAGATCTT
CGCCGACGGCGGCCTGGACTACCTAGGCAACCCCAGCCTGGTGCACGCGCAGAGCATCCT
CGCCATCTGGGCCTGCCAGGTCATTCTCATGGGCGCTGTGGAGGGCTACCGAGTCGCCGG
CGGCCCGTTGGGCGAGGTGTCCGACCCCATCTACCCGGGTGGCCAGTTCGACCCACTGGG
CCTGGC
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 201
Score (bit) 342.0
E-value 1.0e-93
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952485|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_D11, 5'
         (666 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   342   1e-93
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   313   4e-85
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   312   9e-85
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   312   9e-85
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   312   1e-84
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...   310   4e-84
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   310   4e-84
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   310   6e-84
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   309   8e-84
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   309   8e-84
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   308   1e-83
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   308   2e-83
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   308   2e-83
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   308   2e-83
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   308   2e-83
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   308   2e-83
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   308   2e-83
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   307   4e-83
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   307   4e-83
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   305   1e-82
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   305   1e-82
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   305   1e-82
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   305   1e-82
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   304   2e-82
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   303   4e-82
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   303   4e-82
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   303   7e-82
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   302   9e-82
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   302   9e-82
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   302   1e-81

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  342 bits (876), Expect = 1e-93
 Identities = 169/201 (84%), Positives = 177/201 (88%), Gaps = 1/201 (0%)
 Frame = +2

Query: 65  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYL 241
           MA +T  L+S+F GQ             V AGEARVQM + K  APSGSIWYG+DRPLYL
Sbjct: 1   MATSTAALTSTFSGQQLKPVNELSRK--VGAGEARVQMMAPKSKAPSGSIWYGSDRPLYL 58

Query: 242 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 421
           GPFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELL
Sbjct: 59  GPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 118

Query: 422 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 601
           AKNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 119 AKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 178

Query: 602 GPLGEVSDPIYPGGQFDPLGL 664
           GPLGEV DPIYPGG FDPLGL
Sbjct: 179 GPLGEVEDPIYPGGSFDPLGL 199


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  313 bits (803), Expect = 4e-85
 Identities = 157/203 (77%), Positives = 167/203 (82%), Gaps = 3/203 (1%)
 Frame = +2

Query: 65  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPL 235
           MAAAT+   S SF GQA              +G  R+ MR +  KSAPS S WYG DR  
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEI----SGNGRITMRKAVAKSAPSSSPWYGPDRVK 56

Query: 236 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 415
           YLGPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 57  YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 116

Query: 416 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 595
           LLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+
Sbjct: 117 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 176

Query: 596 AGGPLGEVSDPIYPGGQFDPLGL 664
           AGGPLGEV DP+YPGG FDPLGL
Sbjct: 177 AGGPLGEVVDPLYPGGSFDPLGL 199


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  312 bits (800), Expect = 9e-85
 Identities = 154/202 (76%), Positives = 171/202 (84%), Gaps = 2/202 (0%)
 Frame = +2

Query: 65  MAAATVL-SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLY 238
           MAAAT + S++  GQ+            +   EARV MR +  KSA S +IWYGADRP +
Sbjct: 1   MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60

Query: 239 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPEL 418
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 419 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 598
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 180

Query: 599 GGPLGEVSDPIYPGGQFDPLGL 664
           GGPLGEV+DPIYPGG FDPLGL
Sbjct: 181 GGPLGEVTDPIYPGGSFDPLGL 202



 Score = 31.2 bits (69), Expect = 5.2
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +2

Query: 251 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKN 430
           +G P   +T        +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 431 G 433
           G
Sbjct: 240 G 240


>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic
           OS=Zea mays PE=2 SV=1
          Length = 265

 Score =  312 bits (800), Expect = 9e-85
 Identities = 156/206 (75%), Positives = 170/206 (82%), Gaps = 6/206 (2%)
 Frame = +2

Query: 65  MAAATVLSSS--FVGQAXXXXXXXXXXXXVTAGEARVQMRSS----KKSAPSGSIWYGAD 226
           MA++T+  SS  F G+A             + GEARV MR +    K +A SGS WYG D
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSS-------SFGEARVTMRKTAAKAKPAAASGSPWYGPD 53

Query: 227 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCV 406
           R LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV
Sbjct: 54  RVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 113

Query: 407 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG 586
            PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEG
Sbjct: 114 FPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG 173

Query: 587 YRVAGGPLGEVSDPIYPGGQFDPLGL 664
           YR+AGGPLGEV DP+YPGG FDPLGL
Sbjct: 174 YRIAGGPLGEVVDPLYPGGSFDPLGL 199


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
           chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
          Length = 265

 Score =  312 bits (799), Expect = 1e-84
 Identities = 148/174 (85%), Positives = 158/174 (90%), Gaps = 4/174 (2%)
 Frame = +2

Query: 155 GEARVQMRSS----KKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLS 322
           GEARV MR +    K +A SGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLS
Sbjct: 26  GEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 85

Query: 323 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDY 502
           ADPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDY
Sbjct: 86  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 145

Query: 503 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGL 664
           LGNPSL+HAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGG FDPLGL
Sbjct: 146 LGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGL 199


>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R
           PE=2 SV=2
          Length = 265

 Score =  310 bits (794), Expect = 4e-84
 Identities = 156/205 (76%), Positives = 170/205 (82%), Gaps = 5/205 (2%)
 Frame = +2

Query: 65  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS----KKSAPSGSIWYGADR 229
           MAAAT+ LSS  + +A               GEAR+ MR +    K +A SGS WYGADR
Sbjct: 1   MAAATMALSSPVMARAAPSTSSALF------GEARITMRKTAAKPKPAASSGSPWYGADR 54

Query: 230 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 409
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV 
Sbjct: 55  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVF 114

Query: 410 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGY 589
           PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGY
Sbjct: 115 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGY 174

Query: 590 RVAGGPLGEVSDPIYPGGQFDPLGL 664
           R+AGGPLGEV DP+YPGG FDPLGL
Sbjct: 175 RIAGGPLGEVVDPLYPGGAFDPLGL 199


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
          Length = 255

 Score =  310 bits (794), Expect = 4e-84
 Identities = 146/171 (85%), Positives = 157/171 (91%), Gaps = 1/171 (0%)
 Frame = +2

Query: 155 GEARVQMR-SSKKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADP 331
           G A+  MR ++ KS  SGS WYG DR  YLGPFSG PPSYLTGEFPGDYGWDTAGLSADP
Sbjct: 19  GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78

Query: 332 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGN 511
           ETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF++GGLDYLGN
Sbjct: 79  ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138

Query: 512 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGL 664
           PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV+DPIYPGG FDPLGL
Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGL 189


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  310 bits (793), Expect = 6e-84
 Identities = 154/202 (76%), Positives = 162/202 (80%), Gaps = 3/202 (1%)
 Frame = +2

Query: 68  AAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR---SSKKSAPSGSIWYGADRPLY 238
           A+ T LSS F G+A               G  +V MR   S  K   SGS WYG DR  Y
Sbjct: 3   ASTTALSSPFAGKAVKLSPSSSE----VTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKY 58

Query: 239 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPEL 418
           LGPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL
Sbjct: 59  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118

Query: 419 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 598
           LA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVA
Sbjct: 119 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 178

Query: 599 GGPLGEVSDPIYPGGQFDPLGL 664
           GGPLGEV DP+YPGG FDPLGL
Sbjct: 179 GGPLGEVVDPLYPGGSFDPLGL 200


>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2,
           chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R
           PE=2 SV=2
          Length = 261

 Score =  309 bits (792), Expect = 8e-84
 Identities = 147/173 (84%), Positives = 156/173 (90%), Gaps = 3/173 (1%)
 Frame = +2

Query: 155 GEARVQMRSSK---KSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSA 325
           GE R+ MR S    K A SGS WYGADR LYLGP SG PPSYLTGEFPGDYGWDTAGLSA
Sbjct: 23  GEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 82

Query: 326 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYL 505
           DPETFAKNRELEVIH+RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYL
Sbjct: 83  DPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 142

Query: 506 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLGL 664
           GNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGG FDPLGL
Sbjct: 143 GNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 195


>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
           OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
          Length = 266

 Score =  309 bits (792), Expect = 8e-84
 Identities = 154/205 (75%), Positives = 166/205 (80%), Gaps = 5/205 (2%)
 Frame = +2

Query: 65  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSK---KSAPSGSIWYGADR 229
           MAA T+   SSSF G+A               G+ARV MR +    K   S S WYG+DR
Sbjct: 1   MAATTMSLSSSSFAGKAVKNLPSS-----ALIGDARVNMRKTAAKAKQVSSSSPWYGSDR 55

Query: 230 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 409
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV 
Sbjct: 56  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 115

Query: 410 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGY 589
           PELLA+NGVKFGEA WFKAGSQIF+DGGLDYLGNPSLVHAQS+LAIWACQV+LMGAVEGY
Sbjct: 116 PELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGY 175

Query: 590 RVAGGPLGEVSDPIYPGGQFDPLGL 664
           R+AGGPLGE+ DP+YPGG FDPLGL
Sbjct: 176 RIAGGPLGEIVDPLYPGGSFDPLGL 200
tr_hit_id Q9M600
Definition tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphorbia esula
Align length 203
Score (bit) 317.0
E-value 3.0e-85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952485|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_D11, 5'
         (666 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   317   3e-85
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   316   7e-85
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   315   2e-84
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   315   2e-84
tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T...   315   2e-84
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   315   2e-84
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   315   2e-84
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   315   2e-84
tr|Q84U94|Q84U94_CITLI Chlorophyll a/b-binding protein (Fragment...   314   3e-84
tr|Q32291|Q32291_GOSHI Chlorophyll A/B binding protein OS=Gossyp...   314   4e-84
tr|B6T2Y9|B6T2Y9_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   314   4e-84
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   313   5e-84
tr|Q40247|Q40247_LACSA Light-harvesting chlorophyll a/b-binding ...   313   6e-84
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   313   6e-84
tr|Q1EP45|Q1EP45_MUSBA Chlorophyll A-B binding protein (CAB), pu...   313   8e-84
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ...   313   8e-84
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   313   8e-84
tr|Q8W0E6|Q8W0E6_ORYSJ cDNA clone:001-013-E06, full insert seque...   312   1e-83
tr|Q41422|Q41422_SOLTU Chlorophyll a/b binding protein OS=Solanu...   312   1e-83
tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   312   1e-83
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   312   1e-83
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   312   1e-83
tr|A7QQL7|A7QQL7_VITVI Chromosome undetermined scaffold_143, who...   312   1e-83
tr|A5BAI4|A5BAI4_VITVI Putative uncharacterized protein (Chromos...   312   1e-83
tr|A5B5I4|A5B5I4_VITVI Putative uncharacterized protein OS=Vitis...   312   1e-83
tr|A2WUJ5|A2WUJ5_ORYSI Putative uncharacterized protein OS=Oryza...   312   1e-83
tr|Q4VV55|Q4VV55_9CONI Chloroplast light harvesting chlorophyll ...   312   1e-83
tr|Q4VV54|Q4VV54_PINLA Chloroplast light harvesting chlorophyll ...   312   1e-83
tr|Q4VV53|Q4VV53_PINMO Chloroplast light harvesting chlorophyll ...   312   1e-83
tr|Q4VV52|Q4VV52_PINST Chloroplast light harvesting chlorophyll ...   312   1e-83

>tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphorbia
           esula PE=2 SV=1
          Length = 268

 Score =  317 bits (813), Expect = 3e-85
 Identities = 156/203 (76%), Positives = 168/203 (82%), Gaps = 2/203 (0%)
 Frame = +2

Query: 62  AMAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR--SSKKSAPSGSIWYGADRPL 235
           A ++  + S SF GQA               G  RV MR  ++KK APSGS WYG DR  
Sbjct: 3   ASSSMALSSPSFAGQAVKLSPSSASELM---GNGRVSMRKAATKKVAPSGSPWYGPDRVK 59

Query: 236 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 415
           YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE
Sbjct: 60  YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 119

Query: 416 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 595
           LLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+
Sbjct: 120 LLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRI 179

Query: 596 AGGPLGEVSDPIYPGGQFDPLGL 664
           AGGPLGEV DPIYPGG FDPLGL
Sbjct: 180 AGGPLGEVVDPIYPGGSFDPLGL 202


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  316 bits (810), Expect = 7e-85
 Identities = 156/200 (78%), Positives = 167/200 (83%)
 Frame = +2

Query: 65  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 244
           MAAAT + S+ +               V   EARV MR   KS+ S SIWYGADRP +LG
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR---KSSGSDSIWYGADRPKFLG 57

Query: 245 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 424
           PFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLA
Sbjct: 58  PFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLA 117

Query: 425 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 604
           KNGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG
Sbjct: 118 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 177

Query: 605 PLGEVSDPIYPGGQFDPLGL 664
           PLGEV+DPIYPGG FDPLGL
Sbjct: 178 PLGEVTDPIYPGGSFDPLGL 197


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  315 bits (807), Expect = 2e-84
 Identities = 153/199 (76%), Positives = 169/199 (84%), Gaps = 1/199 (0%)
 Frame = +2

Query: 71  AATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLYLGP 247
           AAT ++S+ +               V AGEARV MR +  KS+ S SIWYGADRP +LGP
Sbjct: 4   AATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGP 63

Query: 248 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAK 427
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK
Sbjct: 64  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 123

Query: 428 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 607
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP
Sbjct: 124 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 183

Query: 608 LGEVSDPIYPGGQFDPLGL 664
           LG+V+DPIYPGG FDPLGL
Sbjct: 184 LGDVTDPIYPGGSFDPLGL 202


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  315 bits (807), Expect = 2e-84
 Identities = 156/203 (76%), Positives = 167/203 (82%), Gaps = 3/203 (1%)
 Frame = +2

Query: 65  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMR---SSKKSAPSGSIWYGADRPL 235
           MA+A V SS+F GQ                GE R+ MR   S K  A SGS WYG DR  
Sbjct: 4   MASAGVASSAFAGQIVLKPQNEFVGG--VHGEGRITMRKTASKKVVASSGSPWYGPDRVK 61

Query: 236 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPE 415
           YLGPFSG  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE
Sbjct: 62  YLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 121

Query: 416 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 595
           LL++NGVKFGEAVWFKAGSQIF+DGGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+
Sbjct: 122 LLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRI 181

Query: 596 AGGPLGEVSDPIYPGGQFDPLGL 664
           AGGPLGE++DPIYPGG FDPLGL
Sbjct: 182 AGGPLGEITDPIYPGGSFDPLGL 204


>tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB
           OS=Triticum aestivum GN=Wcab PE=2 SV=1
          Length = 266

 Score =  315 bits (807), Expect = 2e-84
 Identities = 158/205 (77%), Positives = 169/205 (82%), Gaps = 5/205 (2%)
 Frame = +2

Query: 65  MAAATVL--SSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSK---KSAPSGSIWYGADR 229
           MAAAT+   SS+F G+A               GEARV MR +    K   SGS WYGADR
Sbjct: 1   MAAATMSLSSSTFAGKAVKNVPSL-----ALLGEARVTMRKTAAKAKQVSSGSPWYGADR 55

Query: 230 PLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVT 409
            LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCV 
Sbjct: 56  VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVF 115

Query: 410 PELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGY 589
           PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGY
Sbjct: 116 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGY 175

Query: 590 RVAGGPLGEVSDPIYPGGQFDPLGL 664
           RVAGGPLGE+ DP+YPGG FDPLGL
Sbjct: 176 RVAGGPLGEIVDPLYPGGSFDPLGL 200


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
          Length = 263

 Score =  315 bits (807), Expect = 2e-84
 Identities = 156/200 (78%), Positives = 168/200 (84%)
 Frame = +2

Query: 65  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSSKKSAPSGSIWYGADRPLYLG 244
           MAAAT  +S+ +               V A EARV MR   KSA S SIWYGADRP +LG
Sbjct: 1   MAAATACASTALAGQSLLKPVNELSRRVGANEARVTMR---KSAGSDSIWYGADRPKFLG 57

Query: 245 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 424
           PFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLA
Sbjct: 58  PFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLA 117

Query: 425 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 604
           K+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG
Sbjct: 118 KSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 177

Query: 605 PLGEVSDPIYPGGQFDPLGL 664
           PLGEV+DPIYPGG FDPLGL
Sbjct: 178 PLGEVTDPIYPGGSFDPLGL 197


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  315 bits (807), Expect = 2e-84
 Identities = 153/199 (76%), Positives = 169/199 (84%), Gaps = 1/199 (0%)
 Frame = +2

Query: 71  AATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLYLGP 247
           AAT ++S+ +               V AGEARV MR +  KS+ S SIWYGADRP +LGP
Sbjct: 4   AATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGP 63

Query: 248 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAK 427
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK
Sbjct: 64  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 123

Query: 428 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 607
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP
Sbjct: 124 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 183

Query: 608 LGEVSDPIYPGGQFDPLGL 664
           LG+V+DPIYPGG FDPLGL
Sbjct: 184 LGDVTDPIYPGGSFDPLGL 202


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  315 bits (806), Expect = 2e-84
 Identities = 155/201 (77%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
 Frame = +2

Query: 65  MAAATVLSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLYL 241
           MAA T  +S+ +               V + +ARV MR +  KSA S SIWYGADRP YL
Sbjct: 1   MAACTACASTALAGQSLLKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYL 60

Query: 242 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 421
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 422 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 601
           AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 602 GPLGEVSDPIYPGGQFDPLGL 664
           GPLGEV+DPIYPGG FDPLGL
Sbjct: 181 GPLGEVTDPIYPGGSFDPLGL 201


>tr|Q84U94|Q84U94_CITLI Chlorophyll a/b-binding protein (Fragment)
           OS=Citrus limon PE=4 SV=1
          Length = 216

 Score =  314 bits (805), Expect = 3e-84
 Identities = 155/202 (76%), Positives = 169/202 (83%), Gaps = 2/202 (0%)
 Frame = +2

Query: 65  MAAATV-LSSSFVGQAXXXXXXXXXXXXVTAGEARVQMRSS-KKSAPSGSIWYGADRPLY 238
           MA AT+ LSSSFVG+A              +   R+ MR +  KS  SGS WYG DR  Y
Sbjct: 1   MATATMALSSSFVGKAVNLAPSGNEL----SNGGRISMRKTGSKSVSSGSPWYGPDRVKY 56

Query: 239 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPEL 418
           LGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL
Sbjct: 57  LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116

Query: 419 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 598
           LA+NGVKFGEAVWFKAG+QIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+A
Sbjct: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIA 176

Query: 599 GGPLGEVSDPIYPGGQFDPLGL 664
           GGPLGEV+DP+YPGG FDPLGL
Sbjct: 177 GGPLGEVTDPLYPGGSFDPLGL 198


>tr|Q32291|Q32291_GOSHI Chlorophyll A/B binding protein OS=Gossypium
           hirsutum PE=3 SV=1
          Length = 264

 Score =  314 bits (804), Expect = 4e-84
 Identities = 145/169 (85%), Positives = 154/169 (91%)
 Frame = +2

Query: 155 GEARVQMRSSKKSAPSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPE 334
           G  RV MR + K  PSGS WYG DR LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 29  GTGRVSMRKTTKPVPSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 88

Query: 335 TFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNP 514
           TFA+NRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNP
Sbjct: 89  TFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 148

Query: 515 SLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVSDPIYPGGQFDPLG 661
           SL+HAQSILAIWACQVILMGAVEGYR+AGGPLGEV+DP+YPGG FDPLG
Sbjct: 149 SLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 197