DK952489 |
Clone id |
TST38A01NGRL0014_D15 |
Library |
TST38 |
Length |
629 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_D15. 5' end sequence. |
Accession |
DK952489 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL151Contig1 |
Sequence |
CGAGCCTGTGCGTTTGTTCTTATTGCTGCTGCTGCTAACGAGCACTCCATCCAGCAGAGA AGATGGCGGAAGCAGTACCCCTCCCTTCCGGTCAGCCTGAAGTGAAGCTCTTTGGCCGCT GGACCTTCGATGACGTCGAGATCAATGACATCTCGCTGGCTGACTATATCGCTGTCTCGG TGCACAAACATGCCACCTTTGTGCCTCATACCGCTGGGAGATATTCGGTGAAACGTTTCA GAAAGGCCCAGTGCCCCATTGTGGAGAGATTGACCAACTCTCTCATGATGCATGGCCGAA ACAATGGAAAGAAGCTAATGGCAGTGCGGATTGTTAAGCACGCCATGGAGATTATTCACT TGTTGACTGATCAAAATCCAATTCAAGTTATTGTTGATGCAGTTATCAACAGTGGTCCTC GGGAGGATGCCACTCGTATTGGATCGGCTGGTGTTGTTAGAAGACAGGCTGTCGATATCT CTCCTCTTAGGAGAGTAAACCAGGCTATCTATCTCCTCACTACTGGTGCTCGAGAGAGTG CTTTCAGAAATATCAAGACTATAGCGGAGTGCCTTGCTGATGAGCTGATCAATGCAGCCA AAGGTTCTTCCAATAGTTATGCTATCAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O65731 |
Definition |
sp|O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum |
Align length |
179 |
Score (bit) |
325.0 |
E-value |
2.0e-88 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RHY5 |
Definition |
tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
179 |
Score (bit) |
347.0 |
E-value |
4.0e-94 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952489|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_D15, 5' (629 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella paten... 347 4e-94 tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea... 339 7e-92 tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 328 2e-88 tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expre... 327 4e-88 tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza... 327 4e-88 tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome... 326 6e-88 tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome... 325 1e-87 tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Popul... 322 2e-86 tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert seque... 320 3e-86 tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza... 320 3e-86 tr|B6SI83|B6SI83_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 318 2e-85 tr|B4FB66|B4FB66_MAIZE Putative uncharacterized protein OS=Zea m... 318 2e-85 tr|B6SHZ1|B6SHZ1_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 317 3e-85 tr|B3TLU9|B3TLU9_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 317 3e-85 tr|B7FMH6|B7FMH6_MEDTR Putative uncharacterized protein (Fragmen... 316 8e-85 tr|B6UGL6|B6UGL6_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 315 1e-84 tr|B7FGS4|B7FGS4_MEDTR Putative uncharacterized protein OS=Medic... 315 2e-84 tr|Q6RH11|Q6RH11_CAPAN 40S ribosomal protein S5 OS=Capsicum annu... 313 4e-84 tr|A4RZJ5|A4RZJ5_OSTLU Ribosomal protein S5, component of cytoso... 313 7e-84 tr|A8J2I5|A8J2I5_CHLRE Ribosomal protein S5 OS=Chlamydomonas rei... 307 4e-82 tr|Q7SYU3|Q7SYU3_XENLA MGC64490 protein OS=Xenopus laevis GN=rps... 303 7e-81 tr|Q0P475|Q0P475_DANRE Zgc:153322 OS=Danio rerio GN=zgc:153322 P... 301 2e-80 tr|Q28EJ8|Q28EJ8_XENTR Ribosomal protein S5 OS=Xenopus tropicali... 300 5e-80 tr|Q90YR9|Q90YR9_ICTPU 40S ribosomal protein S5 OS=Ictalurus pun... 298 1e-79 tr|Q6Y214|Q6Y214_PAGMA 40S ribosomal protein S5 (Fragment) OS=Pa... 298 1e-79 tr|A2Q0S0|A2Q0S0_SOLSE Ribosomal protein S5 OS=Solea senegalensi... 298 1e-79 tr|Q91V55|Q91V55_MOUSE Putative uncharacterized protein OS=Mus m... 298 1e-79 tr|B0BN81|B0BN81_RAT Rps5 protein (Ribosomal protein S5, isoform... 298 1e-79 tr|Q4KTD7|Q4KTD7_SUBDO S5 OS=Suberites domuncula PE=2 SV=1 298 1e-79 tr|B2R4T2|B2R4T2_HUMAN cDNA, FLJ92205, Homo sapiens ribosomal pr... 298 1e-79
>tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106946 PE=3 SV=1 Length = 196
Score = 347 bits (889), Expect = 4e-94 Identities = 174/179 (97%), Positives = 178/179 (99%) Frame = +3
Query: 93 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 272 QPEVKLFGRW+FDD+EINDISLADYIAVSV KHATFVPHTAGRYSVKRFRKAQCPIVERL Sbjct: 5 QPEVKLFGRWSFDDIEINDISLADYIAVSVDKHATFVPHTAGRYSVKRFRKAQCPIVERL 64
Query: 273 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 452 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDA+INSGPREDATRIGSAG Sbjct: 65 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAIINSGPREDATRIGSAG 124
Query: 453 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 629 V+RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK Sbjct: 125 VIRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 183
>tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 198
Score = 339 bits (870), Expect = 7e-92 Identities = 173/186 (93%), Positives = 178/186 (95%) Frame = +3
Query: 72 AVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQ 251 A LP QPEVKLF RWTF+DVE+ND+SLADYIAV KHATFVPHTAGRYSVKRFRKAQ Sbjct: 2 AATLP--QPEVKLFNRWTFEDVEVNDLSLADYIAVQSQKHATFVPHTAGRYSVKRFRKAQ 59
Query: 252 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDA 431 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDA+INSGPREDA Sbjct: 60 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAIINSGPREDA 119
Query: 432 TRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSS 611 TRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGARESAFRNIKTIAECLADELINAAKGSS Sbjct: 120 TRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGARESAFRNIKTIAECLADELINAAKGSS 179
Query: 612 NSYAIK 629 NSYAIK Sbjct: 180 NSYAIK 185
>tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 195
Score = 328 bits (841), Expect = 2e-88 Identities = 165/179 (92%), Positives = 174/179 (97%) Frame = +3
Query: 93 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 272 Q EVKLF RW+F++VE++DISLADYIAVS KHAT++PHTAGRY+VKRFRKAQCPIVERL Sbjct: 4 QQEVKLFNRWSFEEVEVSDISLADYIAVSPAKHATYLPHTAGRYAVKRFRKAQCPIVERL 63
Query: 273 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 452 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 64 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 123
Query: 453 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 629 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK Sbjct: 124 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 182
>tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0482000 PE=2 SV=1 Length = 199
Score = 327 bits (838), Expect = 4e-88 Identities = 168/189 (88%), Positives = 178/189 (94%) Frame = +3
Query: 63 MAEAVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFR 242 MAE V LP Q EVKLF RW+F+DV++NDISLADY+AV+ KHAT++PHTAGRYS KRFR Sbjct: 1 MAE-VELP--QQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFR 57
Query: 243 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPR 422 KAQCPIVERLTNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPR Sbjct: 58 KAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPR 117
Query: 423 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK 602 EDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK Sbjct: 118 EDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK 177
Query: 603 GSSNSYAIK 629 GSSNSYAIK Sbjct: 178 GSSNSYAIK 186
>tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36106 PE=3 SV=1 Length = 199
Score = 327 bits (838), Expect = 4e-88 Identities = 168/189 (88%), Positives = 178/189 (94%) Frame = +3
Query: 63 MAEAVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFR 242 MAE V LP Q EVKLF RW+F+DV++NDISLADY+AV+ KHAT++PHTAGRYS KRFR Sbjct: 1 MAE-VELP--QQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFR 57
Query: 243 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPR 422 KAQCPIVERLTNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPR Sbjct: 58 KAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPR 117
Query: 423 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK 602 EDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK Sbjct: 118 EDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAK 177
Query: 603 GSSNSYAIK 629 GSSNSYAIK Sbjct: 178 GSSNSYAIK 186
>tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026702001 PE=3 SV=1 Length = 204
Score = 326 bits (836), Expect = 6e-88 Identities = 164/177 (92%), Positives = 172/177 (97%) Frame = +3
Query: 99 EVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 278 EVKLF RW+FD+V+I D+SL DY+AV+ KHAT+VPHTAGRYSVKRFRKAQCPIVERLTN Sbjct: 15 EVKLFNRWSFDEVQIGDMSLLDYVAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 74
Query: 279 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 458 SLMMHGRNNGKKLMAVRI+KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV Sbjct: 75 SLMMHGRNNGKKLMAVRIMKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 134
Query: 459 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 629 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK Sbjct: 135 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 191
>tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025458001 PE=3 SV=1 Length = 208
Score = 325 bits (833), Expect = 1e-87 Identities = 163/176 (92%), Positives = 172/176 (97%) Frame = +3
Query: 102 VKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERLTNS 281 VKLF RW+FD+V+I+DISL DYIAV+ KHAT+VPHTAGRYSVKRFRKAQCPIVERLTNS Sbjct: 20 VKLFNRWSFDEVQISDISLEDYIAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 79
Query: 282 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 461 LMMHGRNNGKKLMAVRI+KHAMEIIHLLT+QNPIQVIVDAVINSGPREDATRIGSAGVVR Sbjct: 80 LMMHGRNNGKKLMAVRIIKHAMEIIHLLTEQNPIQVIVDAVINSGPREDATRIGSAGVVR 139
Query: 462 RQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 629 RQAVDISPLRR+NQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK Sbjct: 140 RQAVDISPLRRINQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 195
>tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 207
Score = 322 bits (824), Expect = 2e-86 Identities = 166/195 (85%), Positives = 175/195 (89%), Gaps = 6/195 (3%) Frame = +3
Query: 63 MAEAVPLPSGQP------EVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRY 224 MAEAV P +VKLF RW+FDD+ +NDISLADY+ V V KHAT+VPHTAGRY Sbjct: 1 MAEAVVAPPNPEANQAIYDVKLFNRWSFDDINVNDISLADYVGVQV-KHATYVPHTAGRY 59
Query: 225 SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAV 404 SVKRFRKAQCPIVERLTNSL MHGRNNGKKL AV IVKHAMEIIHLLTDQNPIQVIVDAV Sbjct: 60 SVKRFRKAQCPIVERLTNSLQMHGRNNGKKLKAVTIVKHAMEIIHLLTDQNPIQVIVDAV 119
Query: 405 INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADE 584 +NSGPREDATRIGSAGVVRRQAVDISPLRRVNQA+YLLTTGARE+AFRNIKTIAECLADE Sbjct: 120 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQALYLLTTGAREAAFRNIKTIAECLADE 179
Query: 585 LINAAKGSSNSYAIK 629 LINAAKGSSNSYAIK Sbjct: 180 LINAAKGSSNSYAIK 194
>tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert sequence OS=Oryza sativa subsp. japonica GN=P0672D08.6 PE=2 SV=1 Length = 200
Score = 320 bits (821), Expect = 3e-86 Identities = 160/179 (89%), Positives = 170/179 (94%) Frame = +3
Query: 93 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 272 Q VKLF W+F+DV++NDISLADY+AVS KHAT++PHTAGRYS KRFRKAQCP+VERL Sbjct: 9 QQVVKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERL 68
Query: 273 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 452 TNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 69 TNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 128
Query: 453 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 629 VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK Sbjct: 129 AVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 187
>tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00008 PE=3 SV=1 Length = 200
Score = 320 bits (821), Expect = 3e-86 Identities = 160/179 (89%), Positives = 170/179 (94%) Frame = +3
Query: 93 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 272 Q VKLF W+F+DV++NDISLADY+AVS KHAT++PHTAGRYS KRFRKAQCP+VERL Sbjct: 9 QQVVKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERL 68
Query: 273 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 452 TNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 69 TNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 128
Query: 453 VVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 629 VRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK Sbjct: 129 AVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIK 187
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