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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952506
Clone id TST38A01NGRL0014_E09
Library
Length 641
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_E09. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
AGTTGGTCCTCCATCGCCAACACACCTCTGCACCTTCTCTTCTGCGACTTCCAAATACTT
TGCTCGAGGAAGATGGGGCGTGGAGTCAGCTATGGAGGCGGGCAAAGCTCTCTCGGTTAC
TTGTTTGGATCAGATGAGCCGCCAAAGGCTGCACCATCAGGCACAACAGGTGCTCCGCCT
ACTGGGGCTGCCTCTGCCGTGAAAGAGAGTACTCCTCCACCAAACCAAGTACCTCCTACC
CTTGCAAAGGCGACACCTGAAAATGGAGGAGTCCCTGATATTGCGGCTGGGCAGCTTGGC
AGTAACCCCAACAACTATCACCGTGCGGATGGGCAAAACACAGGAAACTTTATCACTGAT
CGGCCTTCTACAAAAGTGCACTCTGCTCCTGGTGGAGGTTCCTCACTCGGTTATCTATTT
GGAGGAGGAGATTGAGACAGCAAAGCTGTCAACGTGTTCTTTGGTTCTGCTAGTAGTCGG
AGCCTATTCATTGCTCTGTTGTACTTTGGAAATCTTTTGTTGTCTACAGCTGGTTTAGCC
TGGTATGAAAAATTGCCGACGCCGGGCCATAATGTGAAAGGATTTGTTCTCAGGACACCG
TTTCCAATAGTTTGGCTACTTGCTCTCTATGAACAGTTTTT
■■Homology search results ■■ -
sp_hit_id P46961
Definition sp|P46961|GPI2_YEAST Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit OS=Saccharomyces cerevisiae
Align length 102
Score (bit) 32.3
E-value 2.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952506|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_E09, 5'
         (641 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46961|GPI2_YEAST Phosphatidylinositol N-acetylglucosaminyltr...    32   2.1  
sp|Q5WT40|PNP_LEGPL Polyribonucleotide nucleotidyltransferase OS...    31   4.8  
sp|Q5ZRV8|PNP_LEGPH Polyribonucleotide nucleotidyltransferase OS...    31   4.8  
sp|A5IHU3|PNP_LEGPC Polyribonucleotide nucleotidyltransferase OS...    31   4.8  
sp|Q5X1C7|PNP_LEGPA Polyribonucleotide nucleotidyltransferase OS...    31   4.8  
sp|Q895J3|PNP_CLOTE Polyribonucleotide nucleotidyltransferase OS...    30   8.1  
sp|B0S8U6|FOLD_LEPBA Bifunctional protein folD OS=Leptospira bif...    30   8.1  

>sp|P46961|GPI2_YEAST Phosphatidylinositol
           N-acetylglucosaminyltransferase GPI2 subunit
           OS=Saccharomyces cerevisiae GN=GPI2 PE=1 SV=2
          Length = 280

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = +2

Query: 239 PLQRRHLKMEESLILRLGSLAVTPTTITVRMGKTQETLSLIGLLQKCTLLLVEVPHSVIY 418
           PL    + ++ SLI+    L ++P  +   + KT  + S+  L    TL  + V  S   
Sbjct: 104 PLLSSFMDVKSSLIITFAMLTLSP--VLKSLSKTTASDSIWTLSFWLTLWYIFVISST-- 159

Query: 419 LEEEIETAKLSTCSLVLLVVGAYSLLCCTLEIFC----CLQL 532
            + + + + LST  LV LV    S L  T+++FC    C+QL
Sbjct: 160 -KSKDKPSNLSTNILVALVAVLSSRLSTTIDVFCFLLICIQL 200


>sp|Q5WT40|PNP_LEGPL Polyribonucleotide nucleotidyltransferase
           OS=Legionella pneumophila (strain Lens) GN=pnp PE=3 SV=1
          Length = 729

 Score = 31.2 bits (69), Expect = 4.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 120 VTERALPASIADSTPHLPRAKYLEVAEEKVQRCVGDGGPT 1
           V   AL     + + H PR   ++VAE+K++  +G GG T
Sbjct: 535 VMNNALAEHRTELSQHAPRITTMKVAEDKIRTIIGKGGAT 574


>sp|Q5ZRV8|PNP_LEGPH Polyribonucleotide nucleotidyltransferase
           OS=Legionella pneumophila subsp. pneumophila (strain
           Philadelphia 1 / ATCC 33152 / DSM 7513) GN=pnp PE=3 SV=1
          Length = 729

 Score = 31.2 bits (69), Expect = 4.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 120 VTERALPASIADSTPHLPRAKYLEVAEEKVQRCVGDGGPT 1
           V   AL     + + H PR   ++VAE+K++  +G GG T
Sbjct: 535 VMNNALAEHRTELSQHAPRITTMKVAEDKIRTIIGKGGAT 574


>sp|A5IHU3|PNP_LEGPC Polyribonucleotide nucleotidyltransferase
           OS=Legionella pneumophila (strain Corby) GN=pnp PE=3
           SV=1
          Length = 729

 Score = 31.2 bits (69), Expect = 4.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 120 VTERALPASIADSTPHLPRAKYLEVAEEKVQRCVGDGGPT 1
           V   AL     + + H PR   ++VAE+K++  +G GG T
Sbjct: 535 VMNNALAEHRTELSQHAPRITTMKVAEDKIRTIIGKGGAT 574


>sp|Q5X1C7|PNP_LEGPA Polyribonucleotide nucleotidyltransferase
           OS=Legionella pneumophila (strain Paris) GN=pnp PE=3
           SV=1
          Length = 729

 Score = 31.2 bits (69), Expect = 4.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 120 VTERALPASIADSTPHLPRAKYLEVAEEKVQRCVGDGGPT 1
           V   AL     + + H PR   ++VAE+K++  +G GG T
Sbjct: 535 VMNNALAEHRTELSQHAPRITTMKVAEDKIRTIIGKGGAT 574


>sp|Q895J3|PNP_CLOTE Polyribonucleotide nucleotidyltransferase
           OS=Clostridium tetani GN=pnp PE=3 SV=1
          Length = 705

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 114 ERALPASIADSTPHLPRAKYLEVAEEKVQRCVGDGGPT 1
           +  +P   A+ +P+ PR   + +A EK++  +G GG T
Sbjct: 537 KECIPEHRAELSPYAPRVYTMTIAPEKIRDVIGAGGKT 574


>sp|B0S8U6|FOLD_LEPBA Bifunctional protein folD OS=Leptospira
           biflexa serovar Patoc (strain Patoc 1 / Ames) GN=folD
           PE=3 SV=1
          Length = 291

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 223 NQVPPTLAKATPENGGVPDIAAGQLGSNP 309
           N++  TLAKA  E  G+P +A   +G+NP
Sbjct: 18  NRIQETLAKAKAEGKGIPTLATILVGNNP 46
tr_hit_id A9RX79
Definition tr|A9RX79|A9RX79_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 71
Score (bit) 72.8
E-value 2.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952506|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_E09, 5'
         (641 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RX79|A9RX79_PHYPA Predicted protein OS=Physcomitrella paten...    73   2e-11
tr|A9P098|A9P098_PICSI Putative uncharacterized protein OS=Picea...    72   4e-11
tr|B4G213|B4G213_MAIZE NAP16kDa protein OS=Zea mays PE=4 SV=1          70   1e-10
tr|B4FFI2|B4FFI2_MAIZE Nitrilase-associated protein OS=Zea mays ...    69   2e-10
tr|Q670N9|Q670N9_FRAAN Putative uncharacterized protein (Fragmen...    68   5e-10
tr|A9RJ47|A9RJ47_PHYPA Predicted protein OS=Physcomitrella paten...    68   5e-10
tr|A9PCK3|A9PCK3_POPTR Putative uncharacterized protein OS=Popul...    68   5e-10
tr|Q9LE54|Q9LE54_ARATH Putative nitrilase-associated protein; 69...    67   7e-10
tr|Q8LBS7|Q8LBS7_ARATH Putative nitrilase-associated protein OS=...    67   9e-10
tr|B1PJP0|B1PJP0_SANAU Putative nitrilase-associated protein OS=...    66   2e-09
tr|Q7Y1L9|Q7Y1L9_ORYSJ cDNA clone:J033061K11, full insert sequen...    65   4e-09
tr|A2XI12|A2XI12_ORYSI Putative uncharacterized protein OS=Oryza...    65   4e-09
tr|Q2R0W8|Q2R0W8_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    64   6e-09
tr|B8BLF4|B8BLF4_ORYSI Putative uncharacterized protein OS=Oryza...    64   6e-09
tr|A9SRU7|A9SRU7_PHYPA Predicted protein OS=Physcomitrella paten...    64   6e-09
tr|B8BLF2|B8BLF2_ORYSI Putative uncharacterized protein OS=Oryza...    63   2e-08
tr|Q0DR53|Q0DR53_ORYSJ Os03g0417800 protein (Fragment) OS=Oryza ...    62   2e-08
tr|A9P913|A9P913_POPTR Putative uncharacterized protein OS=Popul...    62   2e-08
tr|B6SPJ4|B6SPJ4_MAIZE Nitrilase-associated protein OS=Zea mays ...    62   3e-08
tr|A9PBX9|A9PBX9_POPTR Putative uncharacterized protein OS=Popul...    62   3e-08
tr|A5BUG4|A5BUG4_VITVI Putative uncharacterized protein OS=Vitis...    61   5e-08
tr|Q9XEQ6|Q9XEQ6_SORBI Putative uncharacterized protein OS=Sorgh...    61   7e-08
tr|Q9FZC2|Q9FZC2_ARATH T1K7.26 protein OS=Arabidopsis thaliana G...    61   7e-08
tr|B6T139|B6T139_MAIZE Nitrilase-associated protein OS=Zea mays ...    61   7e-08
tr|B3H4F1|B3H4F1_ARATH Uncharacterized protein At1g26355.1 OS=Ar...    61   7e-08
tr|B4UW52|B4UW52_ARAHY Putative nitrilase-associated protein (Fr...    60   9e-08
tr|Q1KUR0|Q1KUR0_9ROSI Putative uncharacterized protein OS=Cleom...    60   1e-07
tr|Q9LF22|Q9LF22_ARATH Nitrilase associated protein-like OS=Arab...    59   2e-07
tr|Q8LBJ3|Q8LBJ3_ARATH Nitrilase associated protein-like OS=Arab...    59   2e-07
tr|Q1EMR0|Q1EMR0_PLAMJ Putative nitrilase-associated protein (Fr...    59   2e-07

>tr|A9RX79|A9RX79_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105345 PE=4 SV=1
          Length = 118

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 40/71 (56%), Positives = 44/71 (61%), Gaps = 9/71 (12%)
 Frame = +1

Query: 205 ESTPPPNQVPPTLAKAT-PENGGVP--------DIAAGQLGSNPNNYHRADGQNTGNFIT 357
           E   P  Q P  LA++  PE    P        D  A +LG N NNYHRADGQNTGNFIT
Sbjct: 35  EPQAPVEQRPAGLARSNVPEEKAAPVGKADDAGDKGAPKLGRNSNNYHRADGQNTGNFIT 94

Query: 358 DRPSTKVHSAP 390
           DRPSTKVH+AP
Sbjct: 95  DRPSTKVHAAP 105


>tr|A9P098|A9P098_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 114

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 34/55 (61%), Positives = 41/55 (74%)
 Frame = +1

Query: 226 QVPPTLAKATPENGGVPDIAAGQLGSNPNNYHRADGQNTGNFITDRPSTKVHSAP 390
           Q P  ++  +PENG   ++ AG  GSN NNY RA+GQN GNFITDRPSTKVH+AP
Sbjct: 46  QKPKAVSSKSPENGS--EVPAGVHGSNTNNYFRAEGQNCGNFITDRPSTKVHAAP 98


>tr|B4G213|B4G213_MAIZE NAP16kDa protein OS=Zea mays PE=4 SV=1
          Length = 106

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 38/70 (54%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
 Frame = +1

Query: 202 KESTPPPNQVPPTLAKATPEN-------GGVPDIAAGQLGSNPNNYHRADGQNTGNFITD 360
           K +  P    PP  A A P          G   IAAG + S  NNYHRADGQNTGNF+TD
Sbjct: 25  KPAVAPAVSAPPAAAGAPPAEKPPAAKPDGTSQIAAG-VTSQTNNYHRADGQNTGNFLTD 83

Query: 361 RPSTKVHSAP 390
           RPSTKVH+AP
Sbjct: 84  RPSTKVHAAP 93


>tr|B4FFI2|B4FFI2_MAIZE Nitrilase-associated protein OS=Zea mays
           PE=4 SV=1
          Length = 99

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 33/63 (52%), Positives = 40/63 (63%)
 Frame = +1

Query: 202 KESTPPPNQVPPTLAKATPENGGVPDIAAGQLGSNPNNYHRADGQNTGNFITDRPSTKVH 381
           K +  P    PP    +  +      +AAG + S  NNYHRADGQNTGNF+TDRPSTKVH
Sbjct: 25  KPAVAPAASAPPVEKPSAAKTDAAKQVAAG-VTSQTNNYHRADGQNTGNFLTDRPSTKVH 83

Query: 382 SAP 390
           +AP
Sbjct: 84  AAP 86


>tr|Q670N9|Q670N9_FRAAN Putative uncharacterized protein (Fragment)
           OS=Fragaria ananassa PE=2 SV=1
          Length = 140

 Score = 67.8 bits (164), Expect = 5e-10
 Identities = 38/65 (58%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +1

Query: 199 VKESTPPPNQVPPTLAKATPENGGVP-DIAAGQLGSNPNNYHRADGQNTGNFITDRPSTK 375
           V E TP P   PP      PE   +   I AG   ++ NNY RADGQNTGNFITDRPSTK
Sbjct: 63  VNEPTPKPTASPPP---PKPEPVDITKQIPAGIHSTSTNNYMRADGQNTGNFITDRPSTK 119

Query: 376 VHSAP 390
           VHSAP
Sbjct: 120 VHSAP 124


>tr|A9RJ47|A9RJ47_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_104676 PE=4 SV=1
          Length = 125

 Score = 67.8 bits (164), Expect = 5e-10
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 259 ENGGVPDIAAGQLGSNPNNYHRADGQNTGNFITDRPSTKVHSAP 390
           + G   D+ A ++G N NNYHRADGQN GNFITDRP+TKVH+AP
Sbjct: 69  DEGTSLDMGANKMGRNSNNYHRADGQNNGNFITDRPTTKVHAAP 112


>tr|A9PCK3|A9PCK3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 113

 Score = 67.8 bits (164), Expect = 5e-10
 Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = +1

Query: 217 PPNQVPPTLAKATPENGGV-PDIAAGQLGSNPNNYHRADGQNTGNFITDRPSTKVHSAP 390
           P N  PP+   A P+   +   + AG   ++ NNY RADGQNTGNFITDRPSTKVH+AP
Sbjct: 40  PANNPPPSKPAAAPQPADINKQVPAGINSTSTNNYLRADGQNTGNFITDRPSTKVHAAP 98


>tr|Q9LE54|Q9LE54_ARATH Putative nitrilase-associated protein;
           69823-70365 (At1g69230) (F4N2.18) OS=Arabidopsis
           thaliana GN=At1g69230 PE=4 SV=1
          Length = 110

 Score = 67.4 bits (163), Expect = 7e-10
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = +1

Query: 232 PPTLAKATPENGGVPDIAAGQLGSNPNNYHRADGQNTGNFITDRPSTKVHSAP 390
           PPT A A      +  + AG   ++ NNY RA+GQNTGNFITDRPSTKVHSAP
Sbjct: 43  PPTQAAAANAVDSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAP 95


>tr|Q8LBS7|Q8LBS7_ARATH Putative nitrilase-associated protein
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 110

 Score = 67.0 bits (162), Expect = 9e-10
 Identities = 32/53 (60%), Positives = 37/53 (69%)
 Frame = +1

Query: 232 PPTLAKATPENGGVPDIAAGQLGSNPNNYHRADGQNTGNFITDRPSTKVHSAP 390
           PPT A A      +  + AG   ++ NNY RA+GQNTGNFITDRPSTKVHSAP
Sbjct: 43  PPTQAAAPNAVDSIKQVPAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAP 95


>tr|B1PJP0|B1PJP0_SANAU Putative nitrilase-associated protein
           OS=Sandersonia aurantiaca PE=4 SV=1
          Length = 107

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
 Frame = +1

Query: 205 ESTPPPNQVPPTLAKATPE---NGGVP------DIAAGQLGSNPNNYHRADGQNTGNFIT 357
           E+  P   +PP    A P    +G  P       + AG  G+N NNY R DGQN GNFIT
Sbjct: 22  EAHKPATSIPPAAGNAEPALKPSGASPPADNIKQVPAGIQGNNANNYLRMDGQNCGNFIT 81

Query: 358 DRPSTKVHSAP 390
           DRPSTKVH+AP
Sbjct: 82  DRPSTKVHAAP 92