DK952523 |
Clone id |
TST38A01NGRL0014_F04 |
Library |
TST38 |
Length |
545 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_F04. 5' end sequence. |
Accession |
DK952523 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL151Contig1 |
Sequence |
AATCGCTAGGGTTTACGAGCCTGTGCGTTTGTTCTTATTGCTGCTGCTGCTAACGAGCAC TCCATCCAGCAGAGAAGATGGCGGAAGCAGTGCCCCTCCCTTCCGGTCAGCCTGAAGTGA AGCTCTTTGGCCGCTGGACCTTCGATGACGTCGAGATCAATGACATCTCGCTGGCTGACT ATATCGCTGTCTCGGTGCACAAACATGCCACCTTTGTGCCTCATACCGCTGGGAGATATT CGGTGAAACGTTTCAGAAAGGCCCAGTGCCCCATTGTGGAGAGATTGACCAACTCTCTCA TGATGCATGGCCGAAACAATGGAAAGAAGCTAATGGCAGTGCGGATTGTTAAGCACGCCA TGGAGATTATTCACTTGTTGACTGATCAAAATCCAATTCAAGTTATTGTTGATGCAGTTA TCAACAGTGGTCCTCGGGAGGATGCCACTCGTATTGGATCGGCTGGTGTTGTTAGAAGAC AGGCTGTCGATATCTCTCCTCTTAGGAGAGTAAACCAGGCTATCTATCTCCTCACTACTG GTGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O65731 |
Definition |
sp|O65731|RS5_CICAR 40S ribosomal protein S5 (Fragment) OS=Cicer arietinum |
Align length |
146 |
Score (bit) |
265.0 |
E-value |
8.0e-71 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RHY5 |
Definition |
tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
146 |
Score (bit) |
285.0 |
E-value |
1.0e-75 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952523|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_F04, 5' (545 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella paten... 285 1e-75 tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea... 277 2e-73 tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 266 5e-70 tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expre... 265 1e-69 tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza... 265 1e-69 tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome... 264 2e-69 tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome... 263 4e-69 tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Popul... 261 2e-68 tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert seque... 258 1e-67 tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza... 258 1e-67 tr|B6SI83|B6SI83_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 256 7e-67 tr|B4FB66|B4FB66_MAIZE Putative uncharacterized protein OS=Zea m... 256 7e-67 tr|B6SHZ1|B6SHZ1_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 255 9e-67 tr|B3TLU9|B3TLU9_ELAGV 40S ribosomal protein S5 OS=Elaeis guinee... 255 9e-67 tr|B7FMH6|B7FMH6_MEDTR Putative uncharacterized protein (Fragmen... 255 1e-66 tr|A4RZJ5|A4RZJ5_OSTLU Ribosomal protein S5, component of cytoso... 254 2e-66 tr|B7FGS4|B7FGS4_MEDTR Putative uncharacterized protein OS=Medic... 254 3e-66 tr|B6UGL6|B6UGL6_MAIZE 40S ribosomal protein S5 OS=Zea mays PE=2... 253 4e-66 tr|Q6RH11|Q6RH11_CAPAN 40S ribosomal protein S5 OS=Capsicum annu... 251 1e-65 tr|A8J2I5|A8J2I5_CHLRE Ribosomal protein S5 OS=Chlamydomonas rei... 248 1e-64 tr|Q7SYU3|Q7SYU3_XENLA MGC64490 protein OS=Xenopus laevis GN=rps... 243 5e-63 tr|Q28EJ8|Q28EJ8_XENTR Ribosomal protein S5 OS=Xenopus tropicali... 240 3e-62 tr|Q0P475|Q0P475_DANRE Zgc:153322 OS=Danio rerio GN=zgc:153322 P... 240 3e-62 tr|Q2UVI0|Q2UVI0_9CHLO 40S ribosomal protein S5 OS=Chlamydomonas... 239 7e-62 tr|Q4KTD7|Q4KTD7_SUBDO S5 OS=Suberites domuncula PE=2 SV=1 239 7e-62 tr|B3RP38|B3RP38_TRIAD 40S ribosomal protein S5 OS=Trichoplax ad... 239 7e-62 tr|B3TGB5|B3TGB5_9NEOP Ribosomal protein S5 (Fragment) OS=Lethe ... 238 1e-61 tr|Q90YR9|Q90YR9_ICTPU 40S ribosomal protein S5 OS=Ictalurus pun... 238 2e-61 tr|Q6Y214|Q6Y214_PAGMA 40S ribosomal protein S5 (Fragment) OS=Pa... 238 2e-61 tr|A2Q0S0|A2Q0S0_SOLSE Ribosomal protein S5 OS=Solea senegalensi... 238 2e-61
>tr|A9RHY5|A9RHY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106946 PE=3 SV=1 Length = 196
Score = 285 bits (728), Expect = 1e-75 Identities = 141/146 (96%), Positives = 145/146 (99%) Frame = +3
Query: 108 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 287 QPEVKLFGRW+FDD+EINDISLADYIAVSV KHATFVPHTAGRYSVKRFRKAQCPIVERL Sbjct: 5 QPEVKLFGRWSFDDIEINDISLADYIAVSVDKHATFVPHTAGRYSVKRFRKAQCPIVERL 64
Query: 288 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 467 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDA+INSGPREDATRIGSAG Sbjct: 65 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAIINSGPREDATRIGSAG 124
Query: 468 VVRRQAVDISPLRRVNQAIYLLTTGA 545 V+RRQAVDISPLRRVNQAIYLLTTGA Sbjct: 125 VIRRQAVDISPLRRVNQAIYLLTTGA 150
>tr|A9NRE6|A9NRE6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 198
Score = 277 bits (709), Expect = 2e-73 Identities = 140/153 (91%), Positives = 145/153 (94%) Frame = +3
Query: 87 AVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQ 266 A LP QPEVKLF RWTF+DVE+ND+SLADYIAV KHATFVPHTAGRYSVKRFRKAQ Sbjct: 2 AATLP--QPEVKLFNRWTFEDVEVNDLSLADYIAVQSQKHATFVPHTAGRYSVKRFRKAQ 59
Query: 267 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDA 446 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDA+INSGPREDA Sbjct: 60 CPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAIINSGPREDA 119
Query: 447 TRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGA 545 TRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGA Sbjct: 120 TRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGA 152
>tr|B3TLN7|B3TLN7_ELAGV 40S ribosomal protein S5 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 195
Score = 266 bits (680), Expect = 5e-70 Identities = 132/146 (90%), Positives = 141/146 (96%) Frame = +3
Query: 108 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 287 Q EVKLF RW+F++VE++DISLADYIAVS KHAT++PHTAGRY+VKRFRKAQCPIVERL Sbjct: 4 QQEVKLFNRWSFEEVEVSDISLADYIAVSPAKHATYLPHTAGRYAVKRFRKAQCPIVERL 63
Query: 288 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 467 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 64 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 123
Query: 468 VVRRQAVDISPLRRVNQAIYLLTTGA 545 VVRRQAVDISPLRRVNQAIYLLTTGA Sbjct: 124 VVRRQAVDISPLRRVNQAIYLLTTGA 149
>tr|Q2R4A1|Q2R4A1_ORYSJ 40S ribosomal protein S5, putative, expressed OS=Oryza sativa subsp. japonica GN=Os11g0482000 PE=2 SV=1 Length = 199
Score = 265 bits (677), Expect = 1e-69 Identities = 135/156 (86%), Positives = 145/156 (92%) Frame = +3
Query: 78 MAEAVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFR 257 MAE V LP Q EVKLF RW+F+DV++NDISLADY+AV+ KHAT++PHTAGRYS KRFR Sbjct: 1 MAE-VELP--QQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFR 57
Query: 258 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPR 437 KAQCPIVERLTNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPR Sbjct: 58 KAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPR 117
Query: 438 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGA 545 EDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGA Sbjct: 118 EDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGA 153
>tr|A2ZE95|A2ZE95_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36106 PE=3 SV=1 Length = 199
Score = 265 bits (677), Expect = 1e-69 Identities = 135/156 (86%), Positives = 145/156 (92%) Frame = +3
Query: 78 MAEAVPLPSGQPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFR 257 MAE V LP Q EVKLF RW+F+DV++NDISLADY+AV+ KHAT++PHTAGRYS KRFR Sbjct: 1 MAE-VELP--QQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFR 57
Query: 258 KAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPR 437 KAQCPIVERLTNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPR Sbjct: 58 KAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPR 117
Query: 438 EDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGA 545 EDATRIGSAG VRRQAVDISPLRRVNQAIYLLTTGA Sbjct: 118 EDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGA 153
>tr|A7PYZ4|A7PYZ4_VITVI Chromosome chr4 scaffold_39, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026702001 PE=3 SV=1 Length = 204
Score = 264 bits (675), Expect = 2e-69 Identities = 131/144 (90%), Positives = 139/144 (96%) Frame = +3
Query: 114 EVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 293 EVKLF RW+FD+V+I D+SL DY+AV+ KHAT+VPHTAGRYSVKRFRKAQCPIVERLTN Sbjct: 15 EVKLFNRWSFDEVQIGDMSLLDYVAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 74
Query: 294 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 473 SLMMHGRNNGKKLMAVRI+KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV Sbjct: 75 SLMMHGRNNGKKLMAVRIMKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVV 134
Query: 474 RRQAVDISPLRRVNQAIYLLTTGA 545 RRQAVDISPLRRVNQAIYLLTTGA Sbjct: 135 RRQAVDISPLRRVNQAIYLLTTGA 158
>tr|A7PW34|A7PW34_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025458001 PE=3 SV=1 Length = 208
Score = 263 bits (672), Expect = 4e-69 Identities = 130/143 (90%), Positives = 139/143 (97%) Frame = +3
Query: 117 VKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERLTNS 296 VKLF RW+FD+V+I+DISL DYIAV+ KHAT+VPHTAGRYSVKRFRKAQCPIVERLTNS Sbjct: 20 VKLFNRWSFDEVQISDISLEDYIAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNS 79
Query: 297 LMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVR 476 LMMHGRNNGKKLMAVRI+KHAMEIIHLLT+QNPIQVIVDAVINSGPREDATRIGSAGVVR Sbjct: 80 LMMHGRNNGKKLMAVRIIKHAMEIIHLLTEQNPIQVIVDAVINSGPREDATRIGSAGVVR 139
Query: 477 RQAVDISPLRRVNQAIYLLTTGA 545 RQAVDISPLRR+NQAIYLLTTGA Sbjct: 140 RQAVDISPLRRINQAIYLLTTGA 162
>tr|A9PC08|A9PC08_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 207
Score = 261 bits (666), Expect = 2e-68 Identities = 134/162 (82%), Positives = 142/162 (87%), Gaps = 6/162 (3%) Frame = +3
Query: 78 MAEAVPLPSGQP------EVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRY 239 MAEAV P +VKLF RW+FDD+ +NDISLADY+ V V KHAT+VPHTAGRY Sbjct: 1 MAEAVVAPPNPEANQAIYDVKLFNRWSFDDINVNDISLADYVGVQV-KHATYVPHTAGRY 59
Query: 240 SVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAV 419 SVKRFRKAQCPIVERLTNSL MHGRNNGKKL AV IVKHAMEIIHLLTDQNPIQVIVDAV Sbjct: 60 SVKRFRKAQCPIVERLTNSLQMHGRNNGKKLKAVTIVKHAMEIIHLLTDQNPIQVIVDAV 119
Query: 420 INSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGA 545 +NSGPREDATRIGSAGVVRRQAVDISPLRRVNQA+YLLTTGA Sbjct: 120 VNSGPREDATRIGSAGVVRRQAVDISPLRRVNQALYLLTTGA 161
>tr|Q93VC6|Q93VC6_ORYSJ cDNA clone:006-206-E02, full insert sequence OS=Oryza sativa subsp. japonica GN=P0672D08.6 PE=2 SV=1 Length = 200
Score = 258 bits (660), Expect = 1e-67 Identities = 127/146 (86%), Positives = 137/146 (93%) Frame = +3
Query: 108 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 287 Q VKLF W+F+DV++NDISLADY+AVS KHAT++PHTAGRYS KRFRKAQCP+VERL Sbjct: 9 QQVVKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERL 68
Query: 288 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 467 TNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 69 TNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 128
Query: 468 VVRRQAVDISPLRRVNQAIYLLTTGA 545 VRRQAVDISPLRRVNQAIYLLTTGA Sbjct: 129 AVRRQAVDISPLRRVNQAIYLLTTGA 154
>tr|A2WJL4|A2WJL4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00008 PE=3 SV=1 Length = 200
Score = 258 bits (660), Expect = 1e-67 Identities = 127/146 (86%), Positives = 137/146 (93%) Frame = +3
Query: 108 QPEVKLFGRWTFDDVEINDISLADYIAVSVHKHATFVPHTAGRYSVKRFRKAQCPIVERL 287 Q VKLF W+F+DV++NDISLADY+AVS KHAT++PHTAGRYS KRFRKAQCP+VERL Sbjct: 9 QQVVKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERL 68
Query: 288 TNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAG 467 TNSLMMHGRNNGKK+MAVRIVKHAMEIIHLLTD NPIQVIVDA+INSGPREDATRIGSAG Sbjct: 69 TNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAG 128
Query: 468 VVRRQAVDISPLRRVNQAIYLLTTGA 545 VRRQAVDISPLRRVNQAIYLLTTGA Sbjct: 129 AVRRQAVDISPLRRVNQAIYLLTTGA 154
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