DK952526
Clone id TST38A01NGRL0014_F07
Library
Length 610
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_F07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GGCAGCAGGCGTAGCGATGAGTCACCGCAAGTTCGAGCACCCTCGCCACGGATCCCTGGG
TTTCCTACCTCGCAAGCGCGCTCGCCGCCACAGAGGAAAGGTGAAATCCTTCCCCAAGGA
TGATCCTGCAAAGAAGCCCCACCTCACTGCTTTCCTTGGCTACAAAGCTGGCATGACCCA
CATTGTGAGGGAGGTGGAGAAGCCTGGATCAAAACTCCACAAGAAGGAGACATGTGAGGC
CGTCACAGTCATTGAGACTCCACCTATGATTGTTGTCGGTCTTGTTGCATATGTGAAGAC
TCCTCGTGGGCTGCGAACTTTGACTACCGTGTTTGCCCAGCATTTAAGTGATGAGTTGAG
GAGGCGTTTCTACAAGAACTGGTACAAGTCCAAGAAGAAGGCATTCACCAAGTACTCCAA
GAAGTTTGAACAGGAGGAGGGTAAGAAGGACATAGAATCTGAACTCGAGAAGATGAAGAA
ATACGGGAGTGTCATCCGTGTGCTTGCACACACTCAAGTTAGGAAGCTGAAAGGAATCAA
GCAGAAGAAGGCTCATCTTATGGAGATCCAGGTGAATGGTGGTACCGTAGCTGAGAAGGT
TGACTTTGGC
■■Homology search results ■■ -
sp_hit_id P22738
Definition sp|P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis thaliana
Align length 197
Score (bit) 318.0
E-value 1.0e-86
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952526|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_F07, 5'
(610 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis t... 318 1e-86
sp|P35684|RL3_ORYSJ 60S ribosomal protein L3 OS=Oryza sativa sub... 317 4e-86
sp|P17094|RL31_ARATH 60S ribosomal protein L3-1 OS=Arabidopsis t... 313 6e-85
sp|P39023|RL3_HUMAN 60S ribosomal protein L3 OS=Homo sapiens GN=... 283 6e-76
sp|P21531|RL3_RAT 60S ribosomal protein L3 OS=Rattus norvegicus ... 280 4e-75
sp|Q4R5Q0|RL3_MACFA 60S ribosomal protein L3 OS=Macaca fascicula... 280 4e-75
sp|P27659|RL3_MOUSE 60S ribosomal protein L3 OS=Mus musculus GN=... 277 4e-74
sp|P39872|RL3_BOVIN 60S ribosomal protein L3 OS=Bos taurus GN=RP... 276 8e-74
sp|Q8NKF4|RL3_ASPFU 60S ribosomal protein L3 OS=Aspergillus fumi... 267 3e-71
sp|P40372|RL3A_SCHPO 60S ribosomal protein L3-A OS=Schizosacchar... 265 1e-70
sp|P36584|RL3B_SCHPO 60S ribosomal protein L3-B OS=Schizosacchar... 265 1e-70
sp|P59671|RL3_NEUCR 60S ribosomal protein L3 OS=Neurospora crass... 263 4e-70
sp|P34113|RL3_DICDI 60S ribosomal protein L3 OS=Dictyostelium di... 261 2e-69
sp|P49149|RL3_TOXCA 60S ribosomal protein L3 OS=Toxocara canis G... 260 4e-69
sp|P50880|RL3_CAEEL 60S ribosomal protein L3 OS=Caenorhabditis e... 251 2e-66
sp|Q92901|RL3L_HUMAN 60S ribosomal protein L3-like OS=Homo sapie... 250 5e-66
sp|Q3SZ10|RL3L_BOVIN 60S ribosomal protein L3-like OS=Bos taurus... 249 6e-66
sp|Q9NBK4|RL3_CAEBR 60S ribosomal protein L3 OS=Caenorhabditis b... 249 8e-66
sp|Q759R7|RL3_ASHGO 60S ribosomal protein L3 OS=Ashbya gossypii ... 248 2e-65
sp|O16797|RL3_DROME 60S ribosomal protein L3 OS=Drosophila melan... 248 2e-65
sp|Q6FTJ2|RL3_CANGA 60S ribosomal protein L3 OS=Candida glabrata... 245 1e-64
sp|Q6BXM5|RL3_DEBHA 60S ribosomal protein L3 OS=Debaryomyces han... 244 2e-64
sp|Q6CJR7|RL3_KLULA 60S ribosomal protein L3 OS=Kluyveromyces la... 243 7e-64
sp|P14126|RL3_YEAST 60S ribosomal protein L3 OS=Saccharomyces ce... 242 1e-63
sp|Q8SQI3|RL3_ENCCU 60S ribosomal protein L3 OS=Encephalitozoon ... 152 1e-36
sp|Q3IMY8|RL3_NATPD 50S ribosomal protein L3P OS=Natronomonas ph... 110 7e-24
sp|O26110|RL3_METTH 50S ribosomal protein L3P OS=Methanobacteriu... 106 8e-23
sp|A6UQJ0|RL3_METVS 50S ribosomal protein L3P OS=Methanococcus v... 105 1e-22
sp|Q9UWG2|RL3_METVA 50S ribosomal protein L3P OS=Methanococcus v... 105 1e-22
sp|Q6LX10|RL3_METMP 50S ribosomal protein L3P OS=Methanococcus m... 105 1e-22

>sp|P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis
thaliana GN=ARP2 PE=2 SV=4
Length = 390

Score = 318 bits (815), Expect = 1e-86
Identities = 153/197 (77%), Positives = 171/197 (86%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP K LT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT+IETPPM+VVG+V YVKTPRGLR+L TV+AQHLS+ELRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW E EEGKKDI+S+LEKMKKY SVIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDF 607
L EIQ+NGG +A+KVD+
Sbjct: 181 LNEIQINGGDIAKKVDY 197


>sp|P35684|RL3_ORYSJ 60S ribosomal protein L3 OS=Oryza sativa subsp.
japonica GN=RPL3 PE=2 SV=2
Length = 389

Score = 317 bits (811), Expect = 4e-86
Identities = 146/198 (73%), Positives = 174/198 (87%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKR+ RHRGKVKSFPKDD +K HLT+F+GYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT+IETPP+++VGLVAYVKTPRGLR+L +V+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW + + GKK+I+ +LEKMKKY S++RV+AHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDFG 610
LMEIQ+NGGT+A+KVD+G
Sbjct: 181 LMEIQINGGTIADKVDYG 198


>sp|P17094|RL31_ARATH 60S ribosomal protein L3-1 OS=Arabidopsis
thaliana GN=ARP1 PE=2 SV=5
Length = 389

Score = 313 bits (801), Expect = 6e-85
Identities = 148/197 (75%), Positives = 170/197 (86%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDD K TAF+GYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT+IETP M+VVG+VAYVKTPRGLR+L TV+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW + E+GKK I+++LEKMKKY +VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDF 607
+MEIQ+NGGT+A+KVDF
Sbjct: 181 MMEIQINGGTIAQKVDF 197


>sp|P39023|RL3_HUMAN 60S ribosomal protein L3 OS=Homo sapiens
GN=RPL3 PE=1 SV=2
Length = 403

Score = 283 bits (723), Expect = 6e-76
Identities = 136/197 (69%), Positives = 160/197 (81%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKF PRHGSLGFLPRKR+ RHRGKVKSFPKDDP+K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
++PGSK++KKE EAVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW + E+GKK +E + MKKY VIRV+AHTQ+R L ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179

Query: 557 LMEIQVNGGTVAEKVDF 607
LMEIQVNGGTVAEK+D+
Sbjct: 180 LMEIQVNGGTVAEKLDW 196


>sp|P21531|RL3_RAT 60S ribosomal protein L3 OS=Rattus norvegicus
GN=Rpl3 PE=1 SV=3
Length = 403

Score = 280 bits (716), Expect = 4e-75
Identities = 134/197 (68%), Positives = 159/197 (80%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKF PRHGSLGFLPRKR+ RHRGKVKSFPKDDP+K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
++PGSK++KKE EAVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW + + GKK +E + MKKY VIR++AHTQ+R L ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179

Query: 557 LMEIQVNGGTVAEKVDF 607
LMEIQVNGGTVAEK+D+
Sbjct: 180 LMEIQVNGGTVAEKLDW 196


>sp|Q4R5Q0|RL3_MACFA 60S ribosomal protein L3 OS=Macaca fascicularis
GN=RPL3 PE=2 SV=3
Length = 403

Score = 280 bits (716), Expect = 4e-75
Identities = 135/197 (68%), Positives = 159/197 (80%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKF PRHGSLGFLPRKR+ RHRGKVKSFPKDDP+K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
++PGSK++KKE AVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYK
Sbjct: 61 DRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW + E+GKK +E + MKKY VIRV+AHTQ+R L ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179

Query: 557 LMEIQVNGGTVAEKVDF 607
LMEIQVNGGTVAEK+D+
Sbjct: 180 LMEIQVNGGTVAEKLDW 196


>sp|P27659|RL3_MOUSE 60S ribosomal protein L3 OS=Mus musculus
GN=Rpl3 PE=2 SV=2
Length = 403

Score = 277 bits (708), Expect = 4e-74
Identities = 133/197 (67%), Positives = 158/197 (80%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKF PRHGSLGFLPRKR+ RHRGKVKSFPKDD +K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
++PGSK++KKE EAVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW + + GKK +E + MKKY VIR++AHTQ+R L ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179

Query: 557 LMEIQVNGGTVAEKVDF 607
LMEIQVNGGTVAEK+D+
Sbjct: 180 LMEIQVNGGTVAEKLDW 196


>sp|P39872|RL3_BOVIN 60S ribosomal protein L3 OS=Bos taurus GN=RPL3
PE=1 SV=2
Length = 403

Score = 276 bits (705), Expect = 8e-74
Identities = 131/197 (66%), Positives = 158/197 (80%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKF PRHGSLGFLPRKR+ RHRGKVKSFPKDD +K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
++PGSK++KKE EAVT++ETPPM++VG+V YV+TPRGLRT T+FA+H+SDE +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW + +GKK +E + MKKY VIRV+AHTQ+R L ++QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179

Query: 557 LMEIQVNGGTVAEKVDF 607
LME+QVNGGTVAEK+D+
Sbjct: 180 LMEVQVNGGTVAEKLDW 196


>sp|Q8NKF4|RL3_ASPFU 60S ribosomal protein L3 OS=Aspergillus
fumigatus GN=rpl3 PE=1 SV=2
Length = 392

Score = 267 bits (683), Expect = 3e-71
Identities = 130/197 (65%), Positives = 159/197 (80%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRK+E PRHGSL FLPRKRA RHRGKVKSFPKDDP K HLTA +GYKAGMT +VR++
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
++PG+K+HKKE EAVT+IETPP++ VG+V Y++TPRGLR+LTTV+A+HLSDE++RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW +E G I ELE++KKY +V+RVLAHTQ+RK +KQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178

Query: 557 LMEIQVNGGTVAEKVDF 607
LMEIQVNGG+VA+KVDF
Sbjct: 179 LMEIQVNGGSVADKVDF 195


>sp|P40372|RL3A_SCHPO 60S ribosomal protein L3-A
OS=Schizosaccharomyces pombe GN=rpl3a PE=1 SV=2
Length = 388

Score = 265 bits (678), Expect = 1e-70
Identities = 132/197 (67%), Positives = 160/197 (81%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSH KFE PRHGSLGFLPRKRA R RGKVK+FPKDD +K HLTAFLGYKAGMTHIVR++
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
++PGSK+HK+E EAVTVIETPPM+VVG+V YV+TPRGLR+LTTV+A+HLS+E++RRFYK
Sbjct: 61 DRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW + E + I ELE++KKY SV+RVLAHTQ+RK + QKKAH
Sbjct: 121 NW--FKSKKKAFTKYAKKYAESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177

Query: 557 LMEIQVNGGTVAEKVDF 607
LMEIQVNGG+VA+KV++
Sbjct: 178 LMEIQVNGGSVADKVEW 194


tr_hit_id A9TUZ9
Definition tr|A9TUZ9|A9TUZ9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 198
Score (bit) 335.0
E-value 1.0e-90
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952526|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_F07, 5'
(610 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TUZ9|A9TUZ9_PHYPA Predicted protein OS=Physcomitrella paten... 335 1e-90
tr|A9SGV3|A9SGV3_PHYPA Predicted protein OS=Physcomitrella paten... 332 8e-90
tr|A9T2B3|A9T2B3_PHYPA Predicted protein OS=Physcomitrella paten... 327 3e-88
tr|A9NZI7|A9NZI7_PICSI Putative uncharacterized protein OS=Picea... 325 2e-87
tr|B4FFZ6|B4FFZ6_MAIZE 60S ribosomal protein L3 OS=Zea mays PE=2... 324 3e-87
tr|A5BU35|A5BU35_VITVI Putative uncharacterized protein (Chromos... 323 5e-87
tr|Q9SBR8|Q9SBR8_MEDVA L3 Ribosomal protein OS=Medicago varia GN... 322 1e-86
tr|B4FBM9|B4FBM9_MAIZE Putative uncharacterized protein OS=Zea m... 321 2e-86
tr|Q6TKR0|Q6TKR0_TOBAC Ribosomal protein L3A OS=Nicotiana tabacu... 319 7e-86
tr|A9NRB1|A9NRB1_PICSI Putative uncharacterized protein OS=Picea... 319 9e-86
tr|A9PB80|A9PB80_POPTR Putative uncharacterized protein OS=Popul... 318 1e-85
tr|Q6V959|Q6V959_WHEAT Ribosomal protein L3 (Ribosomal protein L... 318 2e-85
tr|A9P806|A9P806_POPTR Putative uncharacterized protein OS=Popul... 318 2e-85
tr|Q7X748|Q7X748_WHEAT Ribosomal protein L3 (Ribosomal protein L... 317 3e-85
tr|Q7X744|Q7X744_WHEAT Ribosomal protein L3 (Ribosomal protein L... 317 3e-85
tr|Q6SKP4|Q6SKP4_SOLLC Ribosomal protein L3 OS=Solanum lycopersi... 317 3e-85
tr|Q2VCJ2|Q2VCJ2_SOLTU Ribosomal protein L3-like OS=Solanum tube... 317 3e-85
tr|A1YE28|A1YE28_WHEAT Ribosomal protein L3-A2-II OS=Triticum ae... 317 3e-85
tr|Q0IPU6|Q0IPU6_ORYSJ Os12g0167900 protein OS=Oryza sativa subs... 317 5e-85
tr|A2ZIF8|A2ZIF8_ORYSI Putative uncharacterized protein OS=Oryza... 317 5e-85
tr|A7R7U1|A7R7U1_VITVI Chromosome undetermined scaffold_2025, wh... 316 8e-85
tr|A1YE34|A1YE34_WHEAT Ribosomal protein L3-B2 OS=Triticum aesti... 316 8e-85
tr|A9PCQ3|A9PCQ3_POPTR Putative uncharacterized protein OS=Popul... 315 1e-84
tr|A5BAZ0|A5BAZ0_VITVI Putative uncharacterized protein OS=Vitis... 315 2e-84
tr|Q53JG0|Q53JG0_ORYSJ 60S ribosomal protein L3, putative, expre... 314 2e-84
tr|A5D934|A5D934_ORYSA Ribosomal protein L3B OS=Oryza sativa GN=... 314 2e-84
tr|A2ZBV5|A2ZBV5_ORYSI Putative uncharacterized protein OS=Oryza... 314 2e-84
tr|Q0WLE7|Q0WLE7_ARATH Putative uncharacterized protein At1g4317... 313 7e-84
tr|A7Y7Q9|A7Y7Q9_PRUDU Putative 60S ribosomal protein L3 (Fragme... 311 1e-83
tr|A1YE31|A1YE31_WHEAT Ribosomal protein L3-A3 OS=Triticum aesti... 311 1e-83

>tr|A9TUZ9|A9TUZ9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_225706 PE=3 SV=1
Length = 392

Score = 335 bits (859), Expect = 1e-90
Identities = 161/198 (81%), Positives = 176/198 (88%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKRA R RGKVK+FPKDDP KKPHLT+FLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRSRGKVKTFPKDDPVKKPHLTSFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT++ETPP+IVVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPIIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW E EEGK+D++SELE+MKKY SVIRVLAHTQVRKLKGIKQKKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKRDLQSELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDFG 610
L EIQVNGGT+AEKVDFG
Sbjct: 181 LAEIQVNGGTIAEKVDFG 198


>tr|A9SGV3|A9SGV3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_234838 PE=3 SV=1
Length = 392

Score = 332 bits (852), Expect = 8e-90
Identities = 161/198 (81%), Positives = 174/198 (87%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKRA R RGKVK+FPKDD +K PHLT+FLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDDASKAPHLTSFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT++ETPPMIVVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW E EEGKKD+ESELE+MKKY SVIRVLAHTQVRKLKGIKQKKAH
Sbjct: 121 NWSKSKKKAFSNYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDFG 610
L EIQVNGG +AEKVDFG
Sbjct: 181 LAEIQVNGGNIAEKVDFG 198


>tr|A9T2B3|A9T2B3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_190959 PE=3 SV=1
Length = 392

Score = 327 bits (839), Expect = 3e-88
Identities = 158/198 (79%), Positives = 174/198 (87%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKRA R RGKVK+FPKD +K+PHLT+FLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDVASKEPHLTSFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT++ETPPM+VVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW E EEGKKD+ESELE+MKKY SVIRVLAHTQVRKLKGIKQKKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDFG 610
L EIQVNGG++A KVDFG
Sbjct: 181 LAEIQVNGGSIAAKVDFG 198


>tr|A9NZI7|A9NZI7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 389

Score = 325 bits (832), Expect = 2e-87
Identities = 155/197 (78%), Positives = 175/197 (88%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFP+DD +K LTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDQSKPCKLTAFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT+IETPPM++VG+VAY+KTPRGLRTL TV+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTLIETPPMVIVGVVAYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW + EEGKKDI++ELEKMKKY +VIRVLAHTQ++K+KG+KQKKAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKDIQTELEKMKKYATVIRVLAHTQIKKMKGLKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDF 607
LMEIQVNGGTVA+KVD+
Sbjct: 181 LMEIQVNGGTVAQKVDY 197


>tr|B4FFZ6|B4FFZ6_MAIZE 60S ribosomal protein L3 OS=Zea mays PE=2
SV=1
Length = 389

Score = 324 bits (830), Expect = 3e-87
Identities = 153/198 (77%), Positives = 174/198 (87%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKR+ RHRGKVKSFP+DDP K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT+IETPP+++VGLVAYVKTPRGLRTL +V+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW E + GKK+I+ +LEKMKKY SVIRV+AHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDFG 610
LMEIQVNGGT+A+KVD+G
Sbjct: 181 LMEIQVNGGTIADKVDYG 198


>tr|A5BU35|A5BU35_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_59, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00031743001 PE=3 SV=1
Length = 389

Score = 323 bits (828), Expect = 5e-87
Identities = 153/197 (77%), Positives = 174/197 (88%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP+K LTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT++ETPPM++VG+VAYVKTPRGLR+L TV+AQHLS+E++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW E EEGKK I+++LEKMKKY SVIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDF 607
LMEIQVNGGT+A+KVD+
Sbjct: 181 LMEIQVNGGTIAQKVDY 197


>tr|Q9SBR8|Q9SBR8_MEDVA L3 Ribosomal protein OS=Medicago varia
GN=rl3 PE=2 SV=1
Length = 388

Score = 322 bits (824), Expect = 1e-86
Identities = 151/197 (76%), Positives = 172/197 (87%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP K P LTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCE VT+IETPPM+VVG+V YVKTPRGLRTL TV+ QHLS+E++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW E +EGKK+I+++LEK+KKY +VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDF 607
+MEIQVNGGT+A+KVDF
Sbjct: 181 IMEIQVNGGTIAQKVDF 197


>tr|B4FBM9|B4FBM9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 389

Score = 321 bits (822), Expect = 2e-86
Identities = 152/198 (76%), Positives = 173/198 (87%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKR+ RHRGKVKSFP+DD K HLTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDAKKPCHLTAFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT+IETPP+++VGLVAYVKTPRGLRTL +V+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW E + GKK+I+ +LEKMKKY SVIRV+AHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDFG 610
LMEIQVNGGT+A+KVD+G
Sbjct: 181 LMEIQVNGGTIADKVDYG 198


>tr|Q6TKR0|Q6TKR0_TOBAC Ribosomal protein L3A OS=Nicotiana tabacum
GN=RPL3A PE=2 SV=1
Length = 389

Score = 319 bits (818), Expect = 7e-86
Identities = 152/197 (77%), Positives = 171/197 (86%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FPKDDP K LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT+IETPPM++VG+V YVKTPRGLR L TV+AQHLS+EL+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW E +EGKKDI+++LEK+KKY VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 557 LMEIQVNGGTVAEKVDF 607
LMEIQVNGGT+A+KVDF
Sbjct: 181 LMEIQVNGGTIAQKVDF 197


>tr|A9NRB1|A9NRB1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 389

Score = 319 bits (817), Expect = 9e-86
Identities = 151/197 (76%), Positives = 172/197 (87%)
Frame = +2

Query: 17 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPKDDPAKKPHLTAFLGYKAGMTHIVREV 196
MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFP+DDP+K LTAFLGYKAGMTHIVREV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 60

Query: 197 EKPGSKLHKKETCEAVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYK 376
EKPGSKLHKKETCEAVT+IETPPM++VG+V Y+KTPRGLRTL V+AQHLS+E+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTLIETPPMVIVGVVGYIKTPRGLRTLNAVWAQHLSEEVRRRFYK 120

Query: 377 NWXXXXXXXXXXXXXXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAH 556
NW + EEGKK+I++ELEKMKKY +VIRVLAHTQ++K+KG+KQ KAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKEIQTELEKMKKYATVIRVLAHTQIKKMKGLKQNKAH 180

Query: 557 LMEIQVNGGTVAEKVDF 607
LMEIQVNGGTV +KVD+
Sbjct: 181 LMEIQVNGGTVPQKVDY 197