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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952563
Clone id TST38A01NGRL0014_G23
Library
Length 641
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_G23. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GAAAAGAATGCCAATGCGGAGCTCCTTGAGCAGAGAACTGCCATGGAGAAGAATCTGGTG
TCTATGGCAAGAGAAGTGGAGAAGCTCCGTGCAGAGCTAACAAATGCTGAGAAGAAAGTT
CGAGGTGGAGGCTATGGTGGCTCGTATGGCTCTGAAGGAGGGTACGGTTCCTACGCAGAT
GGTTATGGAGTGTCTCAGCTAAATTCAGGTCCTGTTTCTGGTGCTGGTACTGGGGCGGAT
GCTACTGGTCCTGGTGTGCCTTATGGTGCTGGAGCTGGACCTGCCTGGGGAGCCTATGCA
CGGCGTTGAAAGGGCTCAGAGGTTGATTGAAAGGCAGATTAGCTCTGACGGTGAAAGTGA
TTGTGGGAGACCTTGTATCGACCATCCCGTGGAAGGCTCATAGCCAAGCGTGAAGGGACG
AGAACAGGTGGCCTGCCATACATAGCGCTACATGTGATACCAATCATGGTGTAGACAGTT
GTAGGAATGGGTTCTATTAAGCACAGCAAACTTTTTGTATTTTTGCTTTGCAAGGAAACT
GCGTTGTGACGGGTTAATGCTTCTTCATGTCACTTTTCTGCTCTTCGGGGCCTGCTGCAA
GCTATCTGAACTTTAAAGCATGTGCTACTTGGCCCTGTCTG
■■Homology search results ■■ -
sp_hit_id P63389
Definition sp|P63389|YHES_ECOLI Uncharacterized ABC transporter ATP-binding protein yheS OS=Escherichia coli (strain K12)
Align length 40
Score (bit) 33.5
E-value 0.96
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952563|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_G23, 5'
         (641 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P63389|YHES_ECOLI Uncharacterized ABC transporter ATP-binding...    33   0.96 
sp|P63390|YHES_ECO57 Uncharacterized ABC transporter ATP-binding...    33   0.96 
sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha OS=Arabid...    33   1.6  
sp|A2AQP0|MYH7B_MOUSE Myosin-7B OS=Mus musculus GN=Myh7b PE=3 SV=1     32   2.1  
sp|A7E2Y1|MYH7B_HUMAN Myosin-7B OS=Homo sapiens GN=MYH7B PE=2 SV=2     32   3.7  
sp|Q02566|MYH6_MOUSE Myosin-6 OS=Mus musculus GN=Myh6 PE=1 SV=2        31   6.2  
sp|P13533|MYH6_HUMAN Myosin-6 OS=Homo sapiens GN=MYH6 PE=1 SV=4        31   6.2  
sp|P13539|MYH6_MESAU Myosin-6 OS=Mesocricetus auratus GN=MYH6 PE...    30   8.1  

>sp|P63389|YHES_ECOLI Uncharacterized ABC transporter ATP-binding
           protein yheS OS=Escherichia coli (strain K12) GN=yheS
           PE=1 SV=1
          Length = 637

 Score = 33.5 bits (75), Expect = 0.96
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKV 120
           +K   AEL  Q   + K +  + +E+EKL A+L  AE+K+
Sbjct: 546 QKRREAELRAQTQPLRKEIARLEKEMEKLNAQLAQAEEKL 585


>sp|P63390|YHES_ECO57 Uncharacterized ABC transporter ATP-binding
           protein yheS OS=Escherichia coli O157:H7 GN=yheS PE=3
           SV=1
          Length = 637

 Score = 33.5 bits (75), Expect = 0.96
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKV 120
           +K   AEL  Q   + K +  + +E+EKL A+L  AE+K+
Sbjct: 546 QKRREAELRAQTQPLRKEIARLEKEMEKLNAQLAQAEEKL 585


>sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha
           OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1
          Length = 545

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -3

Query: 405 GYEPSTGWSIQGLPQSLSPSELICLSINL 319
           GY  +TG + QG+P  +SP+++ CL  NL
Sbjct: 216 GYALNTGRAAQGMPLRVSPAKIACLDFNL 244


>sp|A2AQP0|MYH7B_MOUSE Myosin-7B OS=Mus musculus GN=Myh7b PE=3 SV=1
          Length = 1941

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 1    EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKVR 123
            E+   AEL EQ  A+E+    +A E+E+LRA L   E+  R
Sbjct: 1667 EQRLAAELREQGQALERRAALLAAELEELRAALEQGERSRR 1707


>sp|A7E2Y1|MYH7B_HUMAN Myosin-7B OS=Homo sapiens GN=MYH7B PE=2 SV=2
          Length = 1941

 Score = 31.6 bits (70), Expect = 3.7
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 1    EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKVR 123
            E+   AEL EQ  A+E+    +A E+E+LRA L   E+  R
Sbjct: 1667 EQRLAAELHEQAQALERRASLLAAELEELRAALEQGERSRR 1707


>sp|Q02566|MYH6_MOUSE Myosin-6 OS=Mus musculus GN=Myh6 PE=1 SV=2
          Length = 1938

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 13   NAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKVR 123
            N  L+ Q+  ME +L  +  EVE+   E  NAE+K +
Sbjct: 1722 NTSLINQKKKMESDLTQLQTEVEEAVQECRNAEEKAK 1758


>sp|P13533|MYH6_HUMAN Myosin-6 OS=Homo sapiens GN=MYH6 PE=1 SV=4
          Length = 1939

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 13   NAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKVR 123
            N  L+ Q+  ME +L  +  EVE+   E  NAE+K +
Sbjct: 1722 NTSLINQKKKMESDLTQLQSEVEEAVQECRNAEEKAK 1758


>sp|P13539|MYH6_MESAU Myosin-6 OS=Mesocricetus auratus GN=MYH6 PE=2
            SV=2
          Length = 1939

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 13   NAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKVR 123
            N  L+ Q+  ME +L  +  EVE+   E  NAE+K +
Sbjct: 1722 NTSLINQKKKMEADLTQLQTEVEEAVQECRNAEEKAK 1758
tr_hit_id B8LQ29
Definition tr|B8LQ29|B8LQ29_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 39
Score (bit) 63.5
E-value 1.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952563|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_G23, 5'
         (641 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LQ29|B8LQ29_PICSI Putative uncharacterized protein OS=Picea...    64   1e-08
tr|A9NPC0|A9NPC0_PICSI Putative uncharacterized protein OS=Picea...    59   3e-07
tr|A9TX62|A9TX62_PHYPA Predicted protein (Fragment) OS=Physcomit...    58   4e-07
tr|A7P6Q1|A7P6Q1_VITVI Chromosome chr9 scaffold_7, whole genome ...    57   1e-06
tr|A5AM26|A5AM26_VITVI Putative uncharacterized protein OS=Vitis...    57   1e-06
tr|A7P380|A7P380_VITVI Chromosome chr1 scaffold_5, whole genome ...    56   2e-06
tr|A5BGR7|A5BGR7_VITVI Putative uncharacterized protein OS=Vitis...    56   2e-06
tr|Q8W134|Q8W134_NARPS Putative uncharacterized protein (Fragmen...    55   3e-06
tr|A2Q466|A2Q466_MEDTR Protein kinase PKN/PRK1, effector OS=Medi...    54   6e-06
tr|A5B941|A5B941_VITVI Putative uncharacterized protein (Chromos...    54   1e-05
tr|A9RY16|A9RY16_PHYPA Predicted protein OS=Physcomitrella paten...    53   2e-05
tr|A9NZ89|A9NZ89_PICSI Putative uncharacterized protein OS=Picea...    52   2e-05
tr|Q9C887|Q9C887_ARATH Myosin-like protein; 97843-94399 OS=Arabi...    52   4e-05
tr|Q9C717|Q9C717_ARATH Putative uncharacterized protein T7N22.12...    52   4e-05
tr|B6TE01|B6TE01_MAIZE Myosin-like protein OS=Zea mays PE=2 SV=1       52   4e-05
tr|B4G1W8|B4G1W8_MAIZE Myosin-like protein OS=Zea mays PE=2 SV=1       52   4e-05
tr|A9NKB6|A9NKB6_PICSI Putative uncharacterized protein OS=Picea...    52   4e-05
tr|A7QGL2|A7QGL2_VITVI Chromosome chr12 scaffold_93, whole genom...    52   4e-05
tr|Q84TX3|Q84TX3_ORYSJ Os03g0818000 protein OS=Oryza sativa subs...    51   7e-05
tr|B8AMA7|B8AMA7_ORYSI Putative uncharacterized protein OS=Oryza...    51   7e-05
tr|A7NY95|A7NY95_VITVI Chromosome chr6 scaffold_3, whole genome ...    51   7e-05
tr|Q2QWJ9|Q2QWJ9_ORYSJ cDNA clone:J013157P20, full insert sequen...    50   1e-04
tr|B8A3R3|B8A3R3_MAIZE Putative uncharacterized protein OS=Zea m...    49   2e-04
tr|B6TYE1|B6TYE1_MAIZE Myosin-like protein OS=Zea mays PE=2 SV=1       49   3e-04
tr|B4FP72|B4FP72_MAIZE Putative uncharacterized protein OS=Zea m...    49   3e-04
tr|A7Q5Y1|A7Q5Y1_VITVI Chromosome chr14 scaffold_54, whole genom...    49   3e-04
tr|A5C4T0|A5C4T0_VITVI Putative uncharacterized protein OS=Vitis...    49   3e-04
tr|B8LRN7|B8LRN7_PICSI Putative uncharacterized protein OS=Picea...    48   4e-04
tr|A9NNS0|A9NNS0_PICSI Putative uncharacterized protein OS=Picea...    47   8e-04
tr|Q7XK24|Q7XK24_ORYSJ Os04g0479100 protein OS=Oryza sativa subs...    46   0.002

>tr|B8LQ29|B8LQ29_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 288

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKK 117
           EK AN+E  EQR AMEKNL+SMAREVEKLRAELTN+EK+
Sbjct: 185 EKKANSEQFEQRQAMEKNLISMAREVEKLRAELTNSEKR 223


>tr|A9NPC0|A9NPC0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 309

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKVR 123
           EK A A+ LEQ  AMEKNL+SMAREVEKLRAEL NA+K+ R
Sbjct: 206 EKKARADQLEQGQAMEKNLISMAREVEKLRAELANADKRGR 246


>tr|A9TX62|A9TX62_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_7114 PE=4 SV=1
          Length = 180

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNA 108
           EK ANAE LEQR AMEKNLV MAR++EKLRAE+TNA
Sbjct: 145 EKKANAEQLEQRQAMEKNLVDMARDLEKLRAEVTNA 180


>tr|A7P6Q1|A7P6Q1_VITVI Chromosome chr9 scaffold_7, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034158001
           PE=4 SV=1
          Length = 282

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKK 117
           EK  N EL+EQR AMEKNLVSMAREVEKLRAEL + + +
Sbjct: 183 EKKGNIELMEQRQAMEKNLVSMAREVEKLRAELASTDAR 221


>tr|A5AM26|A5AM26_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_027853 PE=4 SV=1
          Length = 279

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKK 117
           EK  N EL+EQR AMEKNLVSMAREVEKLRAEL + + +
Sbjct: 183 EKKGNIELMEQRQAMEKNLVSMAREVEKLRAELASTDAR 221


>tr|A7P380|A7P380_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030337001
           PE=4 SV=1
          Length = 227

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKVR 123
           EK AN E LEQ+ AMEKNL+SMARE+EKLRA+  N +++ R
Sbjct: 144 EKKANEEQLEQKQAMEKNLISMAREIEKLRADQLNTDRRAR 184


>tr|A5BGR7|A5BGR7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_007099 PE=4 SV=1
          Length = 265

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKVR 123
           EK AN E LEQ+ AMEKNL+SMARE+EKLRA+  N +++ R
Sbjct: 182 EKKANEEQLEQKQAMEKNLISMAREIEKLRADQLNTDRRAR 222


>tr|Q8W134|Q8W134_NARPS Putative uncharacterized protein (Fragment)
           OS=Narcissus pseudonarcissus PE=2 SV=1
          Length = 128

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKVR 123
           EK   AE  EQ   MEKNLVSMAREVEKLRAE+ NAEK+ R
Sbjct: 10  EKKGYAENYEQGQVMEKNLVSMAREVEKLRAEVANAEKRAR 50


>tr|A2Q466|A2Q466_MEDTR Protein kinase PKN/PRK1, effector
           OS=Medicago truncatula GN=MtrDRAFT_AC155896g33v2 PE=4
           SV=1
          Length = 271

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAE 111
           EK AN E +EQR +MEKN+VSMAREVEKLRAEL + +
Sbjct: 175 EKKANMEFMEQRQSMEKNMVSMAREVEKLRAELASMD 211


>tr|A5B941|A5B941_VITVI Putative uncharacterized protein (Chromosome
           undetermined scaffold_186, whole genome shotgun
           sequence) OS=Vitis vinifera GN=GSVIVT00007218001 PE=4
           SV=1
          Length = 307

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = +1

Query: 1   EKNANAELLEQRTAMEKNLVSMAREVEKLRAELTNAEKKVR 123
           EK   AE  E   AMEKNL++MARE+EKLRAEL NAEK+ R
Sbjct: 203 EKKGYAENYEHGQAMEKNLIAMAREMEKLRAELANAEKRAR 243