DK952576
Clone id TST38A01NGRL0014_H12
Library
Length 546
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_H12. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GACTGGACTTGGAGGATTCTGGTGGACATGAATGTGAAGGGAGGCAGGTTTGAAGAAGCA
CAAAAGATTACGAAAGAAATGGTGGGTCGTGGTCGATCAATTGATTTGCCAGTTTATATG
AATCTTATCCAGGGCTATGGAAAGTCTAAAGATTTCAAGAGTGTGCTTTCTGTGATGAAT
GACATTAAAGCAGCTAATGTGCCATTTGACCACATGTTGGCTGGGGCCCTGCTCAGTGCG
CTCGTGTTGTGTGAAGAGGCAGGATCTGAAGAAAAGTTACCCCTGGTTGAAGAAATTGGT
TTAGTGTACCCAAAATTGAAAGCAGTTATTGAGAATTTATATAAAGAAGAGAGTATTAGC
ACAGCAAAGGTGAAAGAAGACATTCGTGCCATGTTGAACGGTGCTGCAGAGGACTGCAGG
AGGCCTTTTTGCAATTTGTTATTGGATCTATGCTGGATGAAGCAGTCAGCTGAGCAGGCA
CAGGAGCTTCTAGGTATTGCGATATCGTTTGGTATTTACTCAGAGTTGCAGATACGGACC
CCTATG
■■Homology search results ■■ -
sp_hit_id Q9LS25
Definition sp|Q9LS25|PP420_ARATH Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana
Align length 180
Score (bit) 86.7
E-value 7.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952576|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_H12, 5'
(546 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9LS25|PP420_ARATH Pentatricopeptide repeat-containing protei... 87 7e-17
sp|Q8GWE0|PP314_ARATH Pentatricopeptide repeat-containing protei... 73 8e-13
sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protei... 46 1e-04
sp|Q9SY69|PPR29_ARATH Pentatricopeptide repeat-containing protei... 45 3e-04
sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protei... 45 3e-04
sp|P0C896|PP209_ARATH Pentatricopeptide repeat-containing protei... 44 5e-04
sp|O04647|PP399_ARATH Pentatricopeptide repeat-containing protei... 44 7e-04
sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protei... 44 7e-04
sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protei... 43 0.001
sp|Q6NKW7|PP164_ARATH Pentatricopeptide repeat-containing protei... 42 0.001
sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protei... 42 0.003
sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protei... 41 0.003
sp|O81028|PP171_ARATH Pentatricopeptide repeat-containing protei... 41 0.003
sp|Q4V389|PPR55_ARATH Pentatricopeptide repeat-containing protei... 41 0.004
sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protei... 41 0.004
sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containi... 40 0.006
sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protei... 40 0.006
sp|P0C7R4|PP110_ARATH Pentatricopeptide repeat-containing protei... 40 0.006
sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protei... 40 0.007
sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protei... 40 0.007
sp|Q0WVV0|PPR31_ARATH Pentatricopeptide repeat-containing protei... 40 0.010
sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protei... 40 0.010
sp|Q9LVD3|PP434_ARATH Pentatricopeptide repeat-containing protei... 40 0.010
sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protei... 40 0.010
sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protei... 39 0.013
sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protei... 39 0.013
sp|Q9SSF9|PP123_ARATH Pentatricopeptide repeat-containing protei... 39 0.013
sp|Q9CAA5|PP109_ARATH Pentatricopeptide repeat-containing protei... 39 0.013
sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containi... 39 0.017
sp|Q66GP4|PP379_ARATH Pentatricopeptide repeat-containing protei... 39 0.017

>sp|Q9LS25|PP420_ARATH Pentatricopeptide repeat-containing protein
At5g46580, chloroplastic OS=Arabidopsis thaliana
GN=At5g46580 PE=2 SV=1
Length = 711

Score = 86.7 bits (213), Expect = 7e-17
Identities = 54/180 (30%), Positives = 90/180 (50%)
Frame = +1

Query: 1 DWTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMN 180
++++ ++++ GG+ E+A ++ +EM+ G +++ L+Q GK+K V+ V +
Sbjct: 432 NFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFD 491

Query: 181 DIKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYKEESIS 360
V D L G LLS + LCE + EK+ E K NL +E
Sbjct: 492 LSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERA---NKKLVTFVNLIVDEKTE 548

Query: 361 TAKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQSAEQAQELLGIAISFGIYSELQIRT 540
VKE+ + ++N + RRPFCN L+D+C E+A ELL + FG+Y L +T
Sbjct: 549 YETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKT 608



Score = 35.4 bits (80), Expect = 0.18
Identities = 22/89 (24%), Positives = 45/89 (50%)
Frame = +1

Query: 10 WRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDIK 189
+ L++ + G+ A+ + EM+ G + + L++ YGK++ + L + ++K
Sbjct: 329 YNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMK 388

Query: 190 AANVPFDHMLAGALLSALVLCEEAGSEEK 276
A P D +L LL+ +C + G EE+
Sbjct: 389 AKKWPMDFILYNTLLN---MCADIGLEEE 414


>sp|Q8GWE0|PP314_ARATH Pentatricopeptide repeat-containing protein
At4g16390, chloroplastic OS=Arabidopsis thaliana GN=P67
PE=1 SV=2
Length = 688

Score = 73.2 bits (178), Expect = 8e-13
Identities = 45/179 (25%), Positives = 86/179 (48%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
WT+ L+ + GR +A+ ++ G L V ++IQ YGK+K V+ +
Sbjct: 408 WTFSSLITVYACSGRVSKAEAALLQIREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQ 467

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYKEESIST 363
+ + D G LL+ + + SEE L+ + PKL V++ L +E++
Sbjct: 468 VLELGITPDDRFCGCLLNVMT---QTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEE 524

Query: 364 AKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQSAEQAQELLGIAISFGIYSELQIRT 540
K++ +++ D ++ + N L+DLC E+A E+L + + + IY+ LQ ++
Sbjct: 525 GVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKS 583



Score = 30.4 bits (67), Expect = 5.9
Identities = 17/73 (23%), Positives = 37/73 (50%)
Frame = +1

Query: 19 LVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDIKAAN 198
L+D + R +A+ I K+++ G + + Y L++ YG+++ L++ ++K
Sbjct: 307 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 366

Query: 199 VPFDHMLAGALLS 237
+ +L LLS
Sbjct: 367 LSLTVILYNTLLS 379


>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial OS=Arabidopsis thaliana
GN=At5g16640 PE=2 SV=1
Length = 504

Score = 46.2 bits (108), Expect = 1e-04
Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Frame = +1

Query: 7 TWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDI 186
T+ L++ +G R +A + +MVG G ++ +Y +I G KSK + L ++N +
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 187 KAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKL---KAVIENLYKEESI 357
+ + D + +L+S L ++ +YP + A+I+ KE +
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272

Query: 358 STAKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQSAEQAQELLGIAISFGIYSEL 528
S A +E M+ + + + L+ LC M ++A+E+ G +S G + ++
Sbjct: 273 SEA--EEFYEEMIRRSLDPDIVTYSLLIYGLC-MYSRLDEAEEMFGFMVSKGCFPDV 326



Score = 33.9 bits (76), Expect = 0.53
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQG 135
+T+ L+D VK GR EA++ +EM+ R D+ Y LI G
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300


>sp|Q9SY69|PPR29_ARATH Pentatricopeptide repeat-containing protein
At1g10270 OS=Arabidopsis thaliana GN=GRP23 PE=2 SV=1
Length = 913

Score = 44.7 bits (104), Expect = 3e-04
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +1

Query: 7 TWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDI 186
T+R L V+ GR +A + +EM+ +G++ D VY NLI+GY DF + +++
Sbjct: 254 TYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDEL 313

Query: 187 KAANVPFD 210
K+ +D
Sbjct: 314 KSKCTVYD 321


>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein
At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915

Score = 44.7 bits (104), Expect = 3e-04
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
+T+ +V+ K G EEA + ++V G D Y +LI GY + KD S V N+
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278

Query: 184 I-----KAANVPFDHMLAGALLS-----ALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIE 333
+ + V + H++ G ++ A+ L + +E P V ++ +K++
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL---IKSLCG 335

Query: 334 NLYKEESISTAKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQSAEQAQELLGIAISFG 513
+ K E+++ K E+ N +L+D + E+A+ELLG + G
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHT-------YTVLIDSLCSQCKFEKARELLGQMLEKG 388

Query: 514 I 516
+
Sbjct: 389 L 389



Score = 32.0 bits (71), Expect = 2.0
Identities = 24/97 (24%), Positives = 46/97 (47%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
WT+ ++D K R EEA + + +G + ++ +Y LI GY K+ ++
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEE 294
+ + N + + AL+ LC + G ++ L+EE
Sbjct: 558 MLSKNCLPNSLTFNALIHG--LCAD-GKLKEATLLEE 591



Score = 30.4 bits (67), Expect = 5.9
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1

Query: 7 TWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGY---GKSKDFKSVLSVM 177
T+ +L+D +FE+A+++ +M+ +G ++ Y LI GY G +D V+ +M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419

Query: 178 NDIK 189
K
Sbjct: 420 ESRK 423



Score = 30.4 bits (67), Expect = 5.9
Identities = 21/97 (21%), Positives = 44/97 (45%)
Frame = +1

Query: 7 TWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDI 186
T+ L+D + G F+ A ++ M RG D Y ++I KSK + + + +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523

Query: 187 KAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEI 297
+ V + ++ AL+ C+ +E ++E++
Sbjct: 524 EQKGVNPNVVMYTALIDG--YCKAGKVDEAHLMLEKM 558


>sp|P0C896|PP209_ARATH Pentatricopeptide repeat-containing protein
At3g02650, mitochondrial OS=Arabidopsis thaliana
GN=At3g02650 PE=2 SV=1
Length = 576

Score = 43.9 bits (102), Expect = 5e-04
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
+T+ +++ KGG +EAQ+I E + + + Y LI+GY K +++ L ++N+
Sbjct: 443 YTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNE 502

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEKLP-LVEEIGLVYPKLKAVIENLYK--EES 354
+ V + L+ + C +A EK L EE+ L A+ + L + +E
Sbjct: 503 MDRFGVQPNADEYNKLIQS--FCLKALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEM 560

Query: 355 ISTAKVKED 381
S AKV ED
Sbjct: 561 ESEAKVTED 569


>sp|O04647|PP399_ARATH Pentatricopeptide repeat-containing protein
At5g27270 OS=Arabidopsis thaliana GN=EMB976 PE=2 SV=2
Length = 1038

Score = 43.5 bits (101), Expect = 7e-04
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +1

Query: 7 TWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDI 186
++ ++V + E ++ + M GR DL Y+ LIQ Y +S F + +
Sbjct: 881 SYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLV 940

Query: 187 KAANVPFDHMLAGALLSALV---LCEEA 261
K +P H +LLSALV + EEA
Sbjct: 941 KEKGIPLSHSHFSSLLSALVKAGMMEEA 968



Score = 30.4 bits (67), Expect = 5.9
Identities = 14/65 (21%), Positives = 32/65 (49%)
Frame = +1

Query: 7 TWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDI 186
T+ ++ + +G + ++A +I G +D +Y N+I YGK LS+ +++
Sbjct: 811 TYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEM 870

Query: 187 KAANV 201
+ +
Sbjct: 871 QKKGI 875


>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial OS=Arabidopsis thaliana
GN=At5g16420 PE=2 SV=1
Length = 535

Score = 43.5 bits (101), Expect = 7e-04
Identities = 27/97 (27%), Positives = 49/97 (50%)
Frame = +1

Query: 7 TWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDI 186
T+ ++ V G E A+++ +EM+ RG D Y L+ GY K F +VM+D+
Sbjct: 228 TYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDM 287

Query: 187 KAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEI 297
+ + + + G ++ A LC+E S E + +E+
Sbjct: 288 EKNEIEPNEVTYGVMIRA--LCKEKKSGEARNMFDEM 322


>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial OS=Arabidopsis thaliana
GN=At5g12100 PE=2 SV=1
Length = 816

Score = 42.7 bits (99), Expect = 0.001
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Frame = +1

Query: 10 WRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDIK 189
+ +L+D KG R +A+++ EM+ R L Y LI GY K+ + + V +K
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276

Query: 190 AAN-----VPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVI------EN 336
A + + F+ +L G + +V E+A E L ++++G V I N
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMV--EDA--ENVLKEMKDLGFVPDAFTFSILFDGYSSN 332

Query: 337 LYKEESISTAKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQSAEQAQELLGIAISFGI 516
E ++ + D +N C++LL+ + E+A+E+LG ++ G+
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYT-------CSILLNALCKEGKIEKAEEILGREMAKGL 385



Score = 34.7 bits (78), Expect = 0.31
Identities = 25/99 (25%), Positives = 47/99 (47%)
Frame = +1

Query: 7 TWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDI 186
T+ L+D G+ EA+ + E+ +G D+ Y +LI GYG + + + +++ ++
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625

Query: 187 KAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGL 303
K + + L+S LC + G E L E+ L
Sbjct: 626 KRSGIKPTLKTYHLLIS---LCTKEGIELTERLFGEMSL 661



Score = 33.5 bits (75), Expect = 0.69
Identities = 27/97 (27%), Positives = 42/97 (43%)
Frame = +1

Query: 7 TWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDI 186
T+ L+ K G E+A+ + KEM G D + L GY ++ ++ L V
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345

Query: 187 KAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEI 297
+ V + LL+A LC+E K+ EEI
Sbjct: 346 VDSGVKMNAYTCSILLNA--LCKEG----KIEKAEEI 376



Score = 32.7 bits (73), Expect = 1.2
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +1

Query: 10 WRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDIK 189
+ +L+D G+ E+A + +KEM+ +G ++L Y LI G + ++ +I
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591

Query: 190 AANVPFDHMLAGALLS 237
+ D +L+S
Sbjct: 592 RKGLKPDVFTYNSLIS 607



Score = 31.6 bits (70), Expect = 2.6
Identities = 20/91 (21%), Positives = 40/91 (43%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
+T IL++ K G+ E+A++I + +G + +Y +I GY + D +
Sbjct: 355 YTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEA 414

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEK 276
++ + DH+ L+ E + EK
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEK 445


>sp|Q6NKW7|PP164_ARATH Pentatricopeptide repeat-containing protein
At2g19280 OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2
Length = 693

Score = 42.4 bits (98), Expect = 0.001
Identities = 20/81 (24%), Positives = 42/81 (51%)
Frame = +1

Query: 7 TWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDI 186
T IL+ + G +A+ + + M G +D+ Y NL+ GYGK+ V +++++
Sbjct: 445 TSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM 504

Query: 187 KAANVPFDHMLAGALLSALVL 249
++A + D L+ ++V+
Sbjct: 505 RSAGISPDVATYNILIHSMVV 525



Score = 32.0 bits (71), Expect = 2.0
Identities = 23/97 (23%), Positives = 43/97 (44%)
Frame = +1

Query: 7 TWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDI 186
T+ IL+ V G +EA +I E++ RG + ++I G+ K DF+ + +
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM 574

Query: 187 KAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEI 297
+ D + ALL C+ E+ + L ++
Sbjct: 575 ADLRMKPDVVTCSALLHG--YCKAQRMEKAIVLFNKL 609


tr_hit_id A9TFK6
Definition tr|A9TFK6|A9TFK6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 180
Score (bit) 98.2
E-value 2.0e-19
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952576|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_H12, 5'
(546 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TFK6|A9TFK6_PHYPA Predicted protein OS=Physcomitrella paten... 98 2e-19
tr|A9TLE9|A9TLE9_PHYPA Predicted protein OS=Physcomitrella paten... 92 1e-17
tr|A7PCA5|A7PCA5_VITVI Chromosome chr2 scaffold_11, whole genome... 86 1e-15
tr|Q9FSB6|Q9FSB6_RAPSA 67kD chloroplastic RNA-binding protein, P... 82 2e-14
tr|Q9FSB5|Q9FSB5_RAPSA RSP67.2 OS=Raphanus sativus PE=4 SV=1 76 1e-12
tr|B7ZXQ1|B7ZXQ1_MAIZE Putative uncharacterized protein OS=Zea m... 76 1e-12
tr|B4F8M2|B4F8M2_MAIZE Putative uncharacterized protein OS=Zea m... 76 1e-12
tr|B6SPS8|B6SPS8_MAIZE Salt-inducible protein OS=Zea mays PE=2 SV=1 75 2e-12
tr|Q75IP8|Q75IP8_ORYSJ Putative chloroplastic RNA-binding protei... 72 1e-11
tr|Q75IP7|Q75IP7_ORYSJ Os03g0856100 protein OS=Oryza sativa subs... 72 1e-11
tr|B8ANR5|B8ANR5_ORYSI Putative uncharacterized protein OS=Oryza... 72 1e-11
tr|A7R3Z6|A7R3Z6_VITVI Chromosome undetermined scaffold_594, who... 72 2e-11
tr|A7R299|A7R299_VITVI Chromosome undetermined scaffold_410, who... 72 2e-11
tr|A5B4A6|A5B4A6_VITVI Putative uncharacterized protein OS=Vitis... 70 6e-11
tr|Q10PZ4|Q10PZ4_ORYSJ RSP67.2, putative, expressed OS=Oryza sat... 60 6e-08
tr|Q0DTZ4|Q0DTZ4_ORYSJ Os03g0215900 protein OS=Oryza sativa subs... 60 6e-08
tr|B8AQT7|B8AQT7_ORYSI Putative uncharacterized protein OS=Oryza... 60 6e-08
tr|A3AFH5|A3AFH5_ORYSJ Putative uncharacterized protein OS=Oryza... 60 6e-08
tr|B4F8Z1|B4F8Z1_MAIZE Putative uncharacterized protein OS=Zea m... 60 1e-07
tr|Q8LHA7|Q8LHA7_ORYSJ Os07g0621100 protein OS=Oryza sativa subs... 49 1e-04
tr|A3BMA4|A3BMA4_ORYSJ Putative uncharacterized protein OS=Oryza... 49 1e-04
tr|A7QFV5|A7QFV5_VITVI Chromosome undetermined scaffold_89, whol... 49 2e-04
tr|A7Q2Y5|A7Q2Y5_VITVI Chromosome chr12 scaffold_47, whole genom... 48 3e-04
tr|Q8LQY2|Q8LQY2_ORYSJ cDNA clone:J013158F03, full insert sequen... 47 7e-04
tr|Q5QN81|Q5QN81_ORYSJ Pentatricopeptide (PPR) repeat-containing... 47 7e-04
tr|B8ABZ0|B8ABZ0_ORYSI Putative uncharacterized protein OS=Oryza... 47 7e-04
tr|A2WQI0|A2WQI0_ORYSI Putative uncharacterized protein OS=Oryza... 47 7e-04
tr|A9TSP1|A9TSP1_PHYPA Predicted protein OS=Physcomitrella paten... 47 9e-04
tr|A7R617|A7R617_VITVI Chromosome undetermined scaffold_1129, wh... 46 0.001
tr|A5BUC8|A5BUC8_VITVI Putative uncharacterized protein OS=Vitis... 46 0.001

>tr|A9TFK6|A9TFK6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_194612 PE=4 SV=1
Length = 570

Score = 98.2 bits (243), Expect = 2e-19
Identities = 53/180 (29%), Positives = 101/180 (56%)
Frame = +1

Query: 1 DWTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMN 180
DWT+R ++ + K G EAQ++ ++V G D+ Y +L+QGYG +KD++ V +++
Sbjct: 287 DWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEKVQEILH 346

Query: 181 DIKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYKEESIS 360
++ +AN D L +L+ L C+ E L + + P + ++ +++ EE++
Sbjct: 347 EMVSANCAPDERLWCVILNLLDACDTDVEFEILRSC--LRMCNPTMDNIVGHIF-EENLV 403

Query: 361 TAKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQSAEQAQELLGIAISFGIYSELQIRT 540
K+ + ++++L+ AE+ +P CN LL L W K A +LL + S G+Y+ LQ ++
Sbjct: 404 LKKLGDGLQSLLSDMAEEAHKPICNSLLQLIWHKGDRNYAFKLLSLFCSSGVYTGLQTKS 463


>tr|A9TLE9|A9TLE9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_196204 PE=4 SV=1
Length = 570

Score = 92.4 bits (228), Expect = 1e-17
Identities = 47/181 (25%), Positives = 95/181 (52%)
Frame = +1

Query: 1 DWTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMN 180
DWT+R ++ + K G EA + +MV G ID+ Y +L+Q YG +K++ V +++
Sbjct: 287 DWTYRNMISVYAKKGMAVEAHRTFSQMVEAGYQIDVMAYTSLLQAYGNAKEYNKVQEILD 346

Query: 181 DIKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYKEESIS 360
++ + N D L +L+ L C+ ++E+L ++ + I EE++
Sbjct: 347 EMTSVNCAPDERLCCVILNLLDSCD---TDEELGILRSCLRMCSSTMDTIVGQIFEENLV 403

Query: 361 TAKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQSAEQAQELLGIAISFGIYSELQIRT 540
+++ +++++L+ E+ +P CN L+ L W K + +LL + G+Y+ LQ ++
Sbjct: 404 LRELRGELQSLLSDITEEAHKPICNSLMQLSWHKGDRNHSFQLLSLFRVLGVYTGLQTKS 463

Query: 541 P 543
P
Sbjct: 464 P 464


>tr|A7PCA5|A7PCA5_VITVI Chromosome chr2 scaffold_11, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00015784001
PE=4 SV=1
Length = 723

Score = 86.3 bits (212), Expect = 1e-15
Identities = 56/179 (31%), Positives = 90/179 (50%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
W++ ++++ GG + A ++ EM G I++ L Q G+++ ++ V
Sbjct: 446 WSYTAMLNIYGSGGNVDRAMQLFDEMSELGVQINVMGCTCLSQCLGRARRIDDLVKVFEV 505

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYKEESIST 363
V D L G LLS + CE G+E+ ++ + PKL A + L EE IS
Sbjct: 506 SLERGVKPDDRLCGCLLSVVSFCE--GAEDANKVLACLQQANPKLVAFVNLL--EEKISF 561

Query: 364 AKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQSAEQAQELLGIAISFGIYSELQIRT 540
+KE+ R +L A + RRPFCN L+D+C + E+A ELL + +G+Y L RT
Sbjct: 562 EALKEEFRGILTDTAVEARRPFCNCLIDICRNRSLHERAHELLYLGTLYGLYPGLHNRT 620



Score = 39.3 bits (90), Expect = 0.14
Identities = 25/89 (28%), Positives = 45/89 (50%)
Frame = +1

Query: 10 WRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMNDIK 189
+ L++ K G+ A+ + +EMVG G D L++ YGK++ + L + ++
Sbjct: 342 YNTLLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMR 401

Query: 190 AANVPFDHMLAGALLSALVLCEEAGSEEK 276
+ P D +L LLS +C + G EE+
Sbjct: 402 SNGWPMDFILYNTLLS---MCADLGLEEE 427


>tr|Q9FSB6|Q9FSB6_RAPSA 67kD chloroplastic RNA-binding protein,
P67.1 OS=Raphanus sativus PE=4 SV=1
Length = 700

Score = 81.6 bits (200), Expect = 2e-14
Identities = 51/179 (28%), Positives = 87/179 (48%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
WT+ L+ + GR EA+ +EM G L V +LIQ YGK+K V+
Sbjct: 420 WTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVDDVVRTFEQ 479

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYKEESIST 363
+ + D G LL+ + + +EE L+E + PKL V++ L +EE+
Sbjct: 480 VLELGIEPDDRFCGCLLNVMT---QTPTEEIGKLIECVEKAKPKLGRVVKMLVEEENCEE 536

Query: 364 AKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQSAEQAQELLGIAISFGIYSELQIRT 540
+K++ +++ D + + N L+DLC E+A E+L + + + IYS LQ ++
Sbjct: 537 GVLKKEASELIDSIGSDVNKAYLNCLIDLCVNLNKLEKACEILQLGLEYDIYSGLQSKS 595


>tr|Q9FSB5|Q9FSB5_RAPSA RSP67.2 OS=Raphanus sativus PE=4 SV=1
Length = 700

Score = 76.3 bits (186), Expect = 1e-12
Identities = 50/179 (27%), Positives = 84/179 (46%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
WT+ L+ + GR EA+ +EM G L V +LIQ YGK+K V+
Sbjct: 420 WTFSSLITVYSCCGRVSEAEAALREMREAGFEPTLFVLTSLIQCYGKAKQVDDVVRTFEQ 479

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYKEESIST 363
+ + D G LL+ + + EE L+ + PKL V + L +EE+
Sbjct: 480 VLELGIEPDDRFCGCLLNVMT---QTPKEEIGKLIGCVEKAKPKLGRVEKMLVEEENCEE 536

Query: 364 AKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQSAEQAQELLGIAISFGIYSELQIRT 540
+K++ +++ D + + N L+DLC E+A E+L + + + IYS LQ ++
Sbjct: 537 GVLKKEASELIDSIGSDVNKAYLNCLIDLCVNLNKLEKACEILQLGLEYDIYSGLQSKS 595


>tr|B7ZXQ1|B7ZXQ1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 716

Score = 75.9 bits (185), Expect = 1e-12
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 7/185 (3%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
W++ ++++ G + A ++ EM+ G ++ Y +IQ GK++ + + V+
Sbjct: 438 WSYTAMINIYGSNGDTDSALQLFAEMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLES 497

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYK------ 345
+ D L G LLS + L EE+ +V L+ V +NL K
Sbjct: 498 GLEKGLKPDDRLCGCLLSVIALSSG----------EEMEMVLSSLEKVNQNLVKLIRVLG 547

Query: 346 EESISTAKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQ-SAEQAQELLGIAISFGIYS 522
+ + + E+++++LN AA + RRP+CN L+D+C ++A+E+ +A ++G+YS
Sbjct: 548 DAQVGGDDITEELKSVLNSAAPEVRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLYS 607

Query: 523 ELQIR 537
+LQ R
Sbjct: 608 KLQSR 612


>tr|B4F8M2|B4F8M2_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 716

Score = 75.9 bits (185), Expect = 1e-12
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 7/185 (3%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
W++ ++++ G + A ++ EM+ G ++ Y +IQ GK++ + + V+
Sbjct: 438 WSYTAMINIYGSNGDTDSALQLFAEMLKGGIEPNIMSYTIVIQCLGKARRIQQAVEVLES 497

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYK------ 345
+ D L G LLS + L EE+ +V L+ V +NL K
Sbjct: 498 GLEKGLKPDDRLCGCLLSVIALSSG----------EEMEMVLSSLEKVNQNLVKLIRVLG 547

Query: 346 EESISTAKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQ-SAEQAQELLGIAISFGIYS 522
+ + + E+++++LN AA + RRP+CN L+D+C ++A+E+ +A ++G+YS
Sbjct: 548 DAQVGGDDITEELKSVLNSAAPEVRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLYS 607

Query: 523 ELQIR 537
+LQ R
Sbjct: 608 KLQSR 612


>tr|B6SPS8|B6SPS8_MAIZE Salt-inducible protein OS=Zea mays PE=2 SV=1
Length = 716

Score = 75.5 bits (184), Expect = 2e-12
Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 7/185 (3%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
W++ ++++ G + A ++ EM+ G ++ Y +IQ GK+ + + V+
Sbjct: 438 WSYTAMINIYGSNGDTDSALQLFAEMLKGGIEPNIMSYTIVIQCLGKAHRIQQAVEVLES 497

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYK------ 345
+ D L G LLS + L EE+ +V L+ V +NL K
Sbjct: 498 GLEKGLKPDDRLCGCLLSVIALSSG----------EEMEMVLSSLEKVNQNLVKLIRVLG 547

Query: 346 EESISTAKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMKQ-SAEQAQELLGIAISFGIYS 522
+ + + ++++++LNGAA + RRP+CN L+D+C ++A+E+ +A ++G+YS
Sbjct: 548 DAQVGGYDITKELKSVLNGAAPEVRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLYS 607

Query: 523 ELQIR 537
+LQ R
Sbjct: 608 KLQSR 612


>tr|Q75IP8|Q75IP8_ORYSJ Putative chloroplastic RNA-binding protein,
with alternative splicing isoforms (Putative
uncharacterized protein) (Pentatricopeptide, putative,
expressed) OS=Oryza sativa subsp. japonica
GN=LOC_Os03g63910 PE=4 SV=1
Length = 884

Score = 72.4 bits (176), Expect = 1e-11
Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
W++ ++++ G + A ++ EMV G ++ Y +IQ GK+ + + V+
Sbjct: 423 WSYTAMINIYGSSGDADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEA 482

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYKEESIST 363
A + D L G LLS + L +E L +E++ KL ++ + +
Sbjct: 483 GMAKGLKPDDRLCGCLLSVVALSSGDETEVILACLEKVRSNLVKLIRML----GDARVGV 538

Query: 364 AKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMK-QSAEQAQELLGIAISFGIYSELQIR 537
++ +++ +LN AA + RRP+CN L+D+C +E+A EL +A +G+YS++ R
Sbjct: 539 EDLRVELKGILNSAAPEVRRPYCNCLIDICRNHGYPSERAVELFRLARHYGLYSKIHTR 597


>tr|Q75IP7|Q75IP7_ORYSJ Os03g0856100 protein OS=Oryza sativa subsp.
japonica GN=Os03g0856100 PE=4 SV=1
Length = 640

Score = 72.4 bits (176), Expect = 1e-11
Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Frame = +1

Query: 4 WTWRILVDMNVKGGRFEEAQKITKEMVGRGRSIDLPVYMNLIQGYGKSKDFKSVLSVMND 183
W++ ++++ G + A ++ EMV G ++ Y +IQ GK+ + + V+
Sbjct: 363 WSYTAMINIYGSSGDADRALQLFAEMVESGIEPNIMSYTIVIQCLGKAGRIQEAVDVLEA 422

Query: 184 IKAANVPFDHMLAGALLSALVLCEEAGSEEKLPLVEEIGLVYPKLKAVIENLYKEESIST 363
A + D L G LLS + L +E L +E++ KL ++ + +
Sbjct: 423 GMAKGLKPDDRLCGCLLSVVALSSGDETEVILACLEKVRSNLVKLIRML----GDARVGV 478

Query: 364 AKVKEDIRAMLNGAAEDCRRPFCNLLLDLCWMK-QSAEQAQELLGIAISFGIYSELQIR 537
++ +++ +LN AA + RRP+CN L+D+C +E+A EL +A +G+YS++ R
Sbjct: 479 EDLRVELKGILNSAAPEVRRPYCNCLIDICRNHGYPSERAVELFRLARHYGLYSKIHTR 537