DK952589 |
Clone id |
TST38A01NGRL0014_I04 |
Library |
TST38 |
Length |
631 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_I04. 5' end sequence. |
Accession |
DK952589 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL42Contig1 |
Sequence |
CTCTTCTGACCGTTTAGGGTTTCGCTACTGCTGTTAGGGTTTCTCCACGTGCCATCGTGA TTTAGTTCGAGCTACCGTAATTCGGTCTTGTAGATCACTACAGAATTTCCGTATCGACGC GAGGTTTTGGGACACAGCAGATCTCTCTCGTTCTACTTCAGATCTGTGTCCAGGAGCTAA GCGAGCTCAGGATTGATGGAGAATATTTATTCTTTCTGGAGTCTAAATGACAATAATCGG CGCTCTCCCACTGAGATGCAAGAGGATCAAAGCTGGAAAGTAGCAGCTACCAAGCTTGCT TTTGCGGATCAGATGAGGCTGAAGTTTGATAGGTCTAGATCTGATGCGAAGGTTGTGGCC CCTCATGAGAAGAACATTAAACAAGCAAAGGGACGATCCAAGGGCAGAGCTGAAGACATG CTGAAGGGGGAAGGTTTCAACCAGAAGTTTTCGGATGGGGATTTGAGATATGGAGATTTG GGTCAGAAGCTTGGAGCAGGTAACATGTCAACATCACAGATTGTTGGCAGTGCAGATAAA CGATTCAAGTCTCTTCCGCCTGCTGAAACACTTCCTAGACACGAAACTTTGGGTGGCTAC ATATTTGTCTGCAACAATGATACCATGGCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P37707 |
Definition |
sp|P37707|B2_DAUCA B2 protein OS=Daucus carota |
Align length |
44 |
Score (bit) |
65.5 |
E-value |
2.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQZ7 |
Definition |
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
165 |
Score (bit) |
93.6 |
E-value |
9.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952589|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_I04, 5' (631 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea... 94 9e-18 tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea... 81 6e-14 tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medic... 79 2e-13 tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solan... 78 5e-13 tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citru... 77 7e-13 tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/... 73 2e-11 tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana P... 73 2e-11 tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Popul... 68 5e-10 tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella paten... 65 3e-09 tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 65 3e-09 tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella paten... 65 3e-09 tr|Q9FHX9|Q9FHX9_ARATH Arabidopsis thaliana genomic DNA, chromos... 64 8e-09 tr|Q8RXN8|Q8RXN8_ARATH Putative uncharacterized protein At5g4205... 64 8e-09 tr|B8A073|B8A073_MAIZE Putative uncharacterized protein OS=Zea m... 64 8e-09 tr|Q8L6E9|Q8L6E9_PEA GDA2 protein OS=Pisum sativum GN=gda2 PE=2 ... 63 2e-08 tr|Q5JZR1|Q5JZR1_SOYBN N-rich protein OS=Glycine max GN=nrp PE=2... 62 2e-08 tr|B4FUR5|B4FUR5_MAIZE Putative uncharacterized protein OS=Zea m... 61 5e-08 tr|A9REG4|A9REG4_PHYPA Predicted protein OS=Physcomitrella paten... 61 6e-08 tr|Q6L4U7|Q6L4U7_ORYSJ Os05g0498700 protein OS=Oryza sativa subs... 60 8e-08 tr|B8AZL0|B8AZL0_ORYSI Putative uncharacterized protein OS=Oryza... 60 8e-08 tr|B6TDG4|B6TDG4_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 60 8e-08 tr|A3B5I3|A3B5I3_ORYSJ Putative uncharacterized protein OS=Oryza... 60 8e-08 tr|Q5JK83|Q5JK83_ORYSJ cDNA clone:001-207-H09, full insert seque... 58 4e-07 tr|Q5JK82|Q5JK82_ORYSJ Putative GDA2 protein (Os01g0550300 prote... 58 4e-07 tr|B8AA12|B8AA12_ORYSI Putative uncharacterized protein OS=Oryza... 58 4e-07 tr|A2ZU93|A2ZU93_ORYSJ Putative uncharacterized protein OS=Oryza... 58 4e-07 tr|B6TMX1|B6TMX1_MAIZE N-rich protein OS=Zea mays PE=2 SV=1 57 1e-06 tr|B7ZZ36|B7ZZ36_MAIZE Putative uncharacterized protein OS=Zea m... 56 2e-06 tr|B7ZYQ7|B7ZYQ7_MAIZE Putative uncharacterized protein OS=Zea m... 56 2e-06 tr|B4F858|B4F858_MAIZE Putative uncharacterized protein OS=Zea m... 56 2e-06
>tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 282
Score = 93.6 bits (231), Expect = 9e-18 Identities = 62/165 (37%), Positives = 81/165 (49%), Gaps = 21/165 (12%) Frame = +1
Query: 196 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 375 M N YSFW + R +D W +AA++LA A+ R K DR+ +P E Sbjct: 1 MANPYSFWQFGEE-LRGQARASDDHKWTLAASQLALAEHKRSKGDRTNRSEPTESPSEA- 58
Query: 376 IKQAKGRSKGRAE-DMLKGEGFNQKFSDGDLRYGDLGQKLGA------------------ 498 + KG+ KG++E L+ N K + D + GD G K GA Sbjct: 59 --KQKGKYKGKSEVSKLEALTLNLKQMNLDWKPGDAGVKGGALNDIYNASTPYHNNNSGN 116
Query: 499 --GNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTM 627 N + S + DKRFK+LP E LPR+E LGGYIFVCNNDTM Sbjct: 117 NNNNNNGSNNNNAYDKRFKTLPSTEMLPRNEILGGYIFVCNNDTM 161
>tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 273
Score = 80.9 bits (198), Expect = 6e-14 Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 14/158 (8%) Frame = +1
Query: 196 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 375 M + ++FW L ++ R +E DQ+W +AA+KLA +Q R K DR S + E Sbjct: 1 MVDSFAFWQLGESLRGLSSE---DQNWTLAASKLATFEQTRGKSDRINSLEPKTSYAE-- 55
Query: 376 IKQAKGRSKGRAEDMLKGEGFNQ--KFSDGDLRYG------DLGQKLGAGNMSTSQIVG- 528 +K G+S G+ E++ + FN K ++ + G ++ + N +TS Sbjct: 56 VKHRGGKSNGKLEEVNDNQ-FNLIWKPAEAGTKVGIVHGGYNINHVINYNNNNTSSNGNN 114
Query: 529 -----SADKRFKSLPPAETLPRHETLGGYIFVCNNDTM 627 S +KRFK+LP +E LPR+E LGGYIFVCNNDTM Sbjct: 115 NYNNNSFEKRFKTLPSSEMLPRNEILGGYIFVCNNDTM 152
>tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 302
Score = 79.0 bits (193), Expect = 2e-13 Identities = 62/183 (33%), Positives = 82/183 (44%), Gaps = 39/183 (21%) Frame = +1
Query: 196 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 375 M+N++SFW L D R ++ ED W + A+KLA + R K +R + P E Sbjct: 1 MDNMHSFWQLGDE-LRGHSKASEDHKWLMVASKLA---EQRSKAERFNNLDLSKGPLETR 56
Query: 376 IKQAKGRSKGRAEDMLK------GEGFNQKFSDGDLRYGDLG-----QKLG---AGNMST 513 + G + D L F + S LR G QK AGNM++ Sbjct: 57 PRDKFGFQEENKFDTLNLSMLNLDSKFTENMSKSSLRNGVYNMNAVYQKSNVNFAGNMNS 116
Query: 514 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 618 ++ G+ DKRFK+LP AETLPR+E LGGYIFVCNN Sbjct: 117 NKYSGNVQLNKDPHNNNSNNNNNNNENNSNATDKRFKTLPAAETLPRNEVLGGYIFVCNN 176
Query: 619 DTM 627 DTM Sbjct: 177 DTM 179
>tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 298
Score = 77.8 bits (190), Expect = 5e-13 Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 37/181 (20%) Frame = +1
Query: 196 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLA----FADQMRLKFDRSRSDAKVVAP 363 MEN+ S+W D R ++ ED W AA KL+ + + R D S+S A++ P Sbjct: 1 MENMQSYWQFGDE-LRGQSKASEDHKWSTAALKLSEQMKYKGERRNNLDLSKSSAEI-RP 58
Query: 364 HEKNI-------------------KQAKGRSKGRAEDMLK--------------GEGFNQ 444 ++ K + SK R D + G Sbjct: 59 RGNHMFQEDNKWESLNFNMLNLESKMTENMSKNRIMDSIYNANPVYLNPNFNSLGNSSLS 118
Query: 445 KFSDGDLRYGDLGQKLGAGNMSTSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDT 624 KF+ + Y K N+ ++ S DKRFK+LP AETLP++E LGGYIFVCNNDT Sbjct: 119 KFNASN--YTKEPSKNNNNNVESTNGNNSVDKRFKTLPAAETLPKNEVLGGYIFVCNNDT 176
Query: 625 M 627 M Sbjct: 177 M 177
>tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citrus paradisi PE=2 SV=1 Length = 305
Score = 77.4 bits (189), Expect = 7e-13 Identities = 65/196 (33%), Positives = 85/196 (43%), Gaps = 52/196 (26%) Frame = +1
Query: 196 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 375 M+N++SFW L D R + EDQSW AA++LA +Q R K +R N Sbjct: 1 MDNMHSFWQLGDE-LRGQSRTSEDQSWLRAASRLA--EQTRFKGERMN-----------N 46
Query: 376 IKQAKGRSKGRAEDML------KGEGFNQKFS-------------DGDLRYG-------- 474 + +KG ++ R D + E FN F+ LR G Sbjct: 47 LDLSKGMTEIRPRDKIMYHEDNNFESFNFNFNMMNLDNKVVENVTKSSLRNGIYNMNAVY 106
Query: 475 ------DLGQ----KLGAGNMST---------------SQIVGSADKRFKSLPPAETLPR 579 ++G K G N+S S + DKRFK+LP ETLPR Sbjct: 107 QKNSGHNMGNLMVNKYGGNNLSVKEAENNNNNNNNNNDSNANSALDKRFKTLPATETLPR 166
Query: 580 HETLGGYIFVCNNDTM 627 +E LGGYIFVCNNDTM Sbjct: 167 NEVLGGYIFVCNNDTM 182
>tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/MOJ10_18) OS=Arabidopsis thaliana GN=At3g27090 PE=2 SV=1 Length = 296
Score = 72.8 bits (177), Expect = 2e-11 Identities = 57/183 (31%), Positives = 76/183 (41%), Gaps = 44/183 (24%) Frame = +1
Query: 211 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 357 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 358 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 513 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 514 SQIVGSA-------------------------DKRFKSLPPAETLPRHETLGGYIFVCNN 618 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNVVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 619 DTM 627 DTM Sbjct: 172 DTM 174
>tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana PE=2 SV=1 Length = 296
Score = 72.8 bits (177), Expect = 2e-11 Identities = 57/183 (31%), Positives = 76/183 (41%), Gaps = 44/183 (24%) Frame = +1
Query: 211 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRS-----------DAKVV 357 SFW L D R T ED W ATKLA +Q R+K +R + ++ Sbjct: 3 SFWQLGDE-LRGQTRASEDHKWSTVATKLA--EQTRMKGERMNNLDLSKGYTEFRPSEKF 59
Query: 358 APHEKNIKQAKGRSKGRAEDMLKGE--------GFNQKFSDGDLRYGDLGQKLGAGNMST 513 + E N+ G+ + + G+ N F D + G GNM Sbjct: 60 SFQENNLNFNMLNLDGKFGESIMGKTSMQSNVYNMNTVFQKNDFKSG--------GNMKV 111
Query: 514 SQIVGS-------------------------ADKRFKSLPPAETLPRHETLGGYIFVCNN 618 ++ G+ DKRFK+LP +ETLPR+E LGGYIFVCNN Sbjct: 112 NKYNGNIVANKEMSNNKHNNNCNDNGNMNLAVDKRFKTLPASETLPRNEVLGGYIFVCNN 171
Query: 619 DTM 627 DTM Sbjct: 172 DTM 174
>tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 390
Score = 67.8 bits (164), Expect = 5e-10 Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 7/59 (11%) Frame = +1
Query: 475 DLGQKLGAGNMS-------TSQIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTMA 630 D G K G N + + +ADKRFK+LPP+E+LPR+ET+GGYIFVCNNDTMA Sbjct: 212 DFGSKSGKKNSNKKSNSNDNNDNKSAADKRFKTLPPSESLPRYETIGGYIFVCNNDTMA 270
>tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113222 PE=4 SV=1 Length = 174
Score = 65.5 bits (158), Expect = 3e-09 Identities = 30/37 (81%), Positives = 32/37 (86%) Frame = +1
Query: 517 QIVGSADKRFKSLPPAETLPRHETLGGYIFVCNNDTM 627 QI + DKRFKSLPPAE LPR+ TLGGYIFVCNNDTM Sbjct: 12 QITVNPDKRFKSLPPAEILPRNTTLGGYIFVCNNDTM 48
>tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1 Length = 301
Score = 65.1 bits (157), Expect = 3e-09 Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 40/179 (22%) Frame = +1
Query: 211 SFWSLNDNNRRSPTEMQEDQSWKVAATKLAF-----ADQMRLKFDRSRSDAKVVAPHEKN 375 S W L D R P ++ ED+ W + +KLA ++M D + D H+ + Sbjct: 3 SLWHLGDELRGQP-KVVEDRQWSLMTSKLAEITRSKGERMNTVPDAKQWDKTSYQLHDDS 61
Query: 376 ---------------IKQA-------KGRSKGRAEDMLKGEGFNQKFSDGDLRYG----- 474 + +A +G + LKG N + + G Sbjct: 62 RMGHINLGLMNLDLKMNEAAAMKLPFRGMPYNMNQMYLKGSNANSNVNAFKMNVGVNKYS 121
Query: 475 ------DLGQKLGAGNMSTSQIVGS--ADKRFKSLPPAETLPRHETLGGYIFVCNNDTM 627 D K GN + G+ ADKRFK+LP +E LPR+E LGGYIFVCNNDTM Sbjct: 122 NSPNGKDANGKNNGGNNNNGSANGTSVADKRFKTLPTSEMLPRNEVLGGYIFVCNNDTM 180
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