DK952604
Clone id TST38A01NGRL0014_I20
Library
Length 647
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_I20. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
ATGCAGCTTGCCTGCGCGAACATTTGCAATACGACGCACACTCTGCATGGGGATTCAAGG
AGAGCTTTACTTTGCAGAGTGCAGGGAGAAGAGTCTCTTCACCTACGGTTCTGCAGGAGA
ACGTACCTGATAAGGGCATCTCTTTCAAGAACTGAAGATGGATGGAGTAGCAAAGATGTG
GGACGGCAACACAATGTCCCAAGCTTCCAAGACAAGACAGTCGATGCAGTGAAGAGTTAC
CCATGGGATAAGTTATGTTGGCGATTTTCTCAGCGGTTACTGGATCTTATGTGGATACCC
ATGAAGTGGCTGGCGATTCCAGTCTTTGCATTGTCAGCATTAAGTGAATTCCTCTACACC
TTGTCAGCAGGAAAAGATATCCTCATACTAGTTGGGATACTTTCTGGGGTTCTCGTTGCA
ACAGTTATAGGAAATGCTTTCCTTGATGTGATGAAGGAGCTTCAGCAGGATGGGAAGGCC
TCATGGCCTTTGATAATGTTGGGGCTTTTCTTTCTACTTCTGAAGCTTCCTGGCCCTTAC
TACCCAAGCTGGGCGGCAGCATTCGTTCCACATATGGCAAATGCAGGGTTAGTGAAAACA
GTTCTCCTGTATCGAGATTCACACGGGCTTTCTTTGTGGTAGAATTG
■■Homology search results ■■ -
sp_hit_id Q9WU62
Definition sp|Q9WU62|INCE_MOUSE Inner centromere protein OS=Mus musculus
Align length 51
Score (bit) 32.3
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952604|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_I20, 5'
(647 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9WU62|INCE_MOUSE Inner centromere protein OS=Mus musculus GN... 32 2.2
sp|Q9X078|Y983_THEMA UPF0033 protein TM_0983 OS=Thermotoga marit... 31 6.4
sp|P09745|SHU1_ECOLX Shufflon protein A OS=Escherichia coli PE=4... 31 6.4

>sp|Q9WU62|INCE_MOUSE Inner centromere protein OS=Mus musculus
GN=Incenp PE=1 SV=2
Length = 880

Score = 32.3 bits (72), Expect = 2.2
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = -2

Query: 637 TKKARVNLDTGELFSLTLHLPYVERMLPPSLGSKGQEASEVERKAPTLSKA 485
TKKA V + T E S L L ++ LPPS S+G SE E P S+A
Sbjct: 152 TKKAVVEISTSERLSAELQLTKLKGSLPPSPVSQGTLTSE-EELTPKKSEA 201


>sp|Q9X078|Y983_THEMA UPF0033 protein TM_0983 OS=Thermotoga maritima
GN=TM_0983 PE=1 SV=1
Length = 79

Score = 30.8 bits (68), Expect = 6.4
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -2

Query: 637 TKKARVNLDTGELFSLTLHLPYVERMLPPSLGSKGQEASEVERKAPT 497
TK+A N+ GE+ + + P + +P ++ G E E+E P+
Sbjct: 24 TKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHEVLEIEEVGPS 70


>sp|P09745|SHU1_ECOLX Shufflon protein A OS=Escherichia coli PE=4
SV=1
Length = 474

Score = 30.8 bits (68), Expect = 6.4
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3

Query: 456 GASAGWEGLMAFDNVGAFLSTSEASWPLLPKLGGSIRSTY 575
GAS GL+ DN GA LS +W K GS+ +Y
Sbjct: 338 GASCSPNGLVGRDNTGAILSCQSGTW----KTSGSLNGSY 373


tr_hit_id A7P9D7
Definition tr|A7P9D7|A7P9D7_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera
Align length 131
Score (bit) 60.5
E-value 9.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952604|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_I20, 5'
(647 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P9D7|A7P9D7_VITVI Chromosome chr3 scaffold_8, whole genome ... 60 9e-08
tr|B8LMR1|B8LMR1_PICSI Putative uncharacterized protein OS=Picea... 57 1e-06
tr|A9RHV1|A9RHV1_PHYPA Predicted protein OS=Physcomitrella paten... 57 1e-06
tr|Q9XIB8|Q9XIB8_ARATH F13F21.5 protein (Putative uncharacterize... 53 2e-05
tr|A9NNS5|A9NNS5_PICSI Putative uncharacterized protein OS=Picea... 47 0.001
tr|B5DQT4|B5DQT4_DROPS GA23663 OS=Drosophila pseudoobscura pseud... 37 0.79
tr|B4GUL3|B4GUL3_DROPE GL26193 OS=Drosophila persimilis GN=GL261... 37 0.79
tr|A7NUE0|A7NUE0_VITVI Chromosome chr18 scaffold_1, whole genome... 37 1.0
tr|Q9MB88|Q9MB88_BRAOL S18 S-locus receptor kinase OS=Brassica o... 36 1.8
tr|Q10LM4|Q10LM4_ORYSJ Retrotransposon protein, putative, unclas... 36 2.3
tr|B4JUI1|B4JUI1_DROGR GH15742 OS=Drosophila grimshawi GN=GH1574... 34 6.7
tr|B3NFE6|B3NFE6_DROER GG14972 OS=Drosophila erecta GN=GG14972 P... 34 6.7
tr|B4EDG0|B4EDG0_BURCJ Putative capsule polysaccharide export pr... 34 8.7
tr|Q8H2V9|Q8H2V9_ORYSJ Putative uncharacterized protein OSJNBb00... 34 8.7
tr|Q84MV5|Q84MV5_ORYSJ Transposon protein, putative, CACTA, En/S... 34 8.7
tr|Q7XLJ5|Q7XLJ5_ORYSA OSJNBa0009K15.15 protein OS=Oryza sativa ... 34 8.7
tr|B3M2U7|B3M2U7_DROAN GF18510 OS=Drosophila ananassae GN=GF1851... 34 8.7

>tr|A7P9D7|A7P9D7_VITVI Chromosome chr3 scaffold_8, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00036527001
PE=4 SV=1
Length = 253

Score = 60.5 bits (145), Expect = 9e-08
Identities = 36/131 (27%), Positives = 59/131 (45%)
Frame = +1

Query: 211 DKTVDAVKSYPWDKLCWRFSQRLLDLMWIPMKWLAIPVFALSALSEFLYTLSAGKDXXXX 390
D + VKS+PW++ F Q +LDL +K+L P+ A+S+LSE Y + K
Sbjct: 94 DSSPQPVKSFPWNRTLENFIQLILDLTLAVIKYLCAPLLAVSSLSEMSYCANEKKLFLVP 153

Query: 391 XXXXXXXXXATVIGNAFLDVMKELQQDGKASWXXXXXXXXXXXXXXXXXXXXSWAAAFVP 570
A ++ +A L++ L +D + +W W F+P
Sbjct: 154 IPLLIGIVVAGLLKDAALELSPVL-KDAEVAWHLIAIAIFFTLLKLPGPYYPYWGRIFIP 212

Query: 571 HMANAGLVKTV 603
H AN GL++T+
Sbjct: 213 HFANGGLLRTL 223


>tr|B8LMR1|B8LMR1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247

Score = 56.6 bits (135), Expect = 1e-06
Identities = 34/136 (25%), Positives = 58/136 (42%)
Frame = +1

Query: 196 VPSFQDKTVDAVKSYPWDKLCWRFSQRLLDLMWIPMKWLAIPVFALSALSEFLYTLSAGK 375
V + ++ + +K +PWD++ +F L L + KWL IPV +S+LSE +Y K
Sbjct: 88 VRNLWERCPEPIKVFPWDRVYNKFFHHLFRLAFEVAKWLFIPVLFVSSLSEMVYCGWQNK 147

Query: 376 DXXXXXXXXXXXXXATVIGNAFLDVMKELQQDGKASWXXXXXXXXXXXXXXXXXXXXSWA 555
+ A ++ +++ + LQ+ G W W
Sbjct: 148 ELLIPIGMLAGIYLAGILKETAVELSENLQEGG-FPWHLAIIGAFFALIKFPGPYYPYWG 206

Query: 556 AAFVPHMANAGLVKTV 603
F+PH AN GL +T+
Sbjct: 207 RIFLPHFANGGLWRTL 222


>tr|A9RHV1|A9RHV1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_66428 PE=4 SV=1
Length = 244

Score = 56.6 bits (135), Expect = 1e-06
Identities = 43/142 (30%), Positives = 54/142 (38%), Gaps = 7/142 (4%)
Frame = +1

Query: 214 KTVDAVKSYPWDKLCWRFSQRLLDLMWIPMKWLAIPVFALSALSEFLYTLSAGKDXXXXX 393
K + ++ +PW K F QRLL W K+LAIPV A S LSE YTL K
Sbjct: 94 KAPEPIRVFPWGKAGNLFVQRLLHQFWTVGKYLAIPVLAASMLSELSYTLLQEK------ 147

Query: 394 XXXXXXXXATVIGNAFLDVMKELQQD-------GKASWXXXXXXXXXXXXXXXXXXXXSW 552
+ G AF +MKE + G+ W +W
Sbjct: 148 --VLIIPAGMIGGFAFAGMMKETAVELAADIEVGQFPWHLVALGFMFGALKFIGPYLPAW 205

Query: 553 AAAFVPHMANAGLVKTVLLYRD 618
VPH AN GL + L D
Sbjct: 206 GRVSVPHFANGGLWHVIKLVID 227


>tr|Q9XIB8|Q9XIB8_ARATH F13F21.5 protein (Putative uncharacterized
protein At1g49510) (At1g49510) OS=Arabidopsis thaliana
GN=At1g49510 PE=2 SV=1
Length = 240

Score = 52.8 bits (125), Expect = 2e-05
Identities = 44/183 (24%), Positives = 68/183 (37%)
Frame = +1

Query: 55 SRRALLCRVQGEESLHLRFCRRTYLIRASLSRTEDGWSSKDVGRQHNVPSFQDKTVDAVK 234
S+R+LLCR ES H + L RT+ W D + VK
Sbjct: 48 SKRSLLCRAIHMESGHSGEQPKKLNFDNLLRRTKHVW---------------DNSPQPVK 92

Query: 235 SYPWDKLCWRFSQRLLDLMWIPMKWLAIPVFALSALSEFLYTLSAGKDXXXXXXXXXXXX 414
+PW++ F Q +LDL +K+L +P+ A+S++SE Y K
Sbjct: 93 EFPWNRAFGNFIQLVLDLAISVVKFLFVPILAVSSISEMSYCAHERKLALVPFPLVIGMV 152

Query: 415 XATVIGNAFLDVMKELQQDGKASWXXXXXXXXXXXXXXXXXXXXSWAAAFVPHMANAGLV 594
A V+ L + L ++ + W W VPH AN L+
Sbjct: 153 VAGVLQETALKISPRL-KEAEVPWHLIAMMMFFTLIKLPGPYYPYWGRLLVPHFANGVLL 211

Query: 595 KTV 603
+ +
Sbjct: 212 RAL 214


>tr|A9NNS5|A9NNS5_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 259

Score = 47.0 bits (110), Expect = 0.001
Identities = 31/134 (23%), Positives = 52/134 (38%)
Frame = +1

Query: 223 DAVKSYPWDKLCWRFSQRLLDLMWIPMKWLAIPVFALSALSEFLYTLSAGKDXXXXXXXX 402
+ V+ +PW K R L + K L IP+ A++ L E Y ++ K+
Sbjct: 100 EPVRKFPWQKAGERVIHHLFQPILGVAKRLLIPILAVTFLMEASYCIAQNKELFIPIGLL 159

Query: 403 XXXXXATVIGNAFLDVMKELQQDGKASWXXXXXXXXXXXXXXXXXXXXSWAAAFVPHMAN 582
A ++ L++ + L++ G W W +PH AN
Sbjct: 160 AGSVFAEILKETALELSQNLKEGG-FPWHLLAMALIFSLIKFLGPFYPYWGGILLPHFAN 218

Query: 583 AGLVKTVLLYRDSH 624
GL +T+ L R+ H
Sbjct: 219 GGLWQTIWLTRNWH 232


>tr|B5DQT4|B5DQT4_DROPS GA23663 OS=Drosophila pseudoobscura
pseudoobscura GN=GA23663 PE=4 SV=1
Length = 724

Score = 37.4 bits (85), Expect = 0.79
Identities = 27/86 (31%), Positives = 41/86 (47%)
Frame = +1

Query: 79 VQGEESLHLRFCRRTYLIRASLSRTEDGWSSKDVGRQHNVPSFQDKTVDAVKSYPWDKLC 258
V E+ + L R L R+S + GWS+ + +P +Q K P++ L
Sbjct: 207 VHAEQWVMLGVIRVRQLRRSS---RKIGWSAPEYTDSSYLPGWQKP----YKVVPYEDLH 259

Query: 259 WRFSQRLLDLMWIPMKWLAIPVFALS 336
WR ++ W+PMKWLAI F L+
Sbjct: 260 WRVTRP-----WVPMKWLAIDSFLLN 280


>tr|B4GUL3|B4GUL3_DROPE GL26193 OS=Drosophila persimilis GN=GL26193
PE=4 SV=1
Length = 637

Score = 37.4 bits (85), Expect = 0.79
Identities = 27/86 (31%), Positives = 41/86 (47%)
Frame = +1

Query: 79 VQGEESLHLRFCRRTYLIRASLSRTEDGWSSKDVGRQHNVPSFQDKTVDAVKSYPWDKLC 258
V E+ + L R L R+S + GWS+ + +P +Q K P++ L
Sbjct: 207 VHAEQWVMLGVIRVRQLRRSS---RKIGWSAPEYTDSSYLPGWQKP----YKVVPYEDLH 259

Query: 259 WRFSQRLLDLMWIPMKWLAIPVFALS 336
WR ++ W+PMKWLAI F L+
Sbjct: 260 WRVTRP-----WVPMKWLAIDSFLLN 280


>tr|A7NUE0|A7NUE0_VITVI Chromosome chr18 scaffold_1, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00015009001
PE=4 SV=1
Length = 168

Score = 37.0 bits (84), Expect = 1.0
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1

Query: 223 DAVKSYPWDKLCWRFSQRLLDLMWIPMKWLAIPVFALSALSEFLYTLSAGKD 378
D++K +PW K Q+LL L +KW I +F LS++S+ ++ +S K+
Sbjct: 75 DSLKDFPWKKAEDTVLQQLLLLGQKALKWSFITLFILSSVSDVIFCISRNKE 126


>tr|Q9MB88|Q9MB88_BRAOL S18 S-locus receptor kinase OS=Brassica
oleracea GN=SRK18 PE=2 SV=1
Length = 856

Score = 36.2 bits (82), Expect = 1.8
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = +3

Query: 393 WDTFWGS----RCNSYRKCFP*--CDEGASAGWEGLMAFDNVGAFLSTSEASWPLLPKLG 554
W FW S +C+ YR C P CDE S + FD ++ W L
Sbjct: 289 WQEFWSSPVSLQCDPYRICGPYAYCDENTSPVCNCIQGFD------PKNQQQWDLRSHAS 342

Query: 555 GSIRSTYGKCR 587
G IR T+ CR
Sbjct: 343 GCIRRTWLSCR 353


>tr|Q10LM4|Q10LM4_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os03g22300 PE=4 SV=1
Length = 1349

Score = 35.8 bits (81), Expect = 2.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2

Query: 583 HLPYVERMLPPSLGSKGQEASEVERKAPTLSKAMRPSHPAEAPSSHQG 440
+ PYV R++ LG+ GQ ++++ P L P P APSSH G
Sbjct: 1271 YAPYVMRLIQDKLGAAGQNLKKLKQYKPRLQLGA-PRAPRAAPSSHPG 1317