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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952605
Clone id TST38A01NGRL0014_I21
Library
Length 638
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_I21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CAAGTGACTGTGAGGGAGGGTGAGCCTTTGATATGGCAACAATGGCGGCTGCAGCGCTTT
CTTCAAGCACCTTCGCCGGCCAGGCTGTGTATAAGCCCCAGAGCGAGCTGAGCTCTAAGG
TAGGCAATGTGGGCGAGGCCCGCGTGTCCATGAGGAAAACAGTGTCAAAGAGCTCCGACA
GCCCCTGGTATGGCCCCGACCGCGTGAAGTACCTTGGCCCTTTCTCCGGCGAGGCCCCCA
GCTATCTCAAGGGAGAATTTCCCGGCGACTACGGCTGGGACACCGCCGGCCTGTCTGCCG
ACCCTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATTCACGCACGGTGGGCTATGT
TGGGAGCCCTGGGCTGCGTGACCCCCGAGCTGCTGGCCAAGAATGGTGTGAAGTTTGGCG
AGGCCGTGTGGTTCAAGGCTGGCTCGCAGATCTTTGCTGAGGGTGGGCTTGACTACTTGG
GCAACCCCAGCCTCGTCCACGCTCAGAGCATTCTGGCCATCTGGGCATGTCAGGTAATTC
TCATGGGCGCTGTTGAGGGATACAGAGTGGCAGGTGGGCCCCTGGGCGAGGTGGAGGATC
CCATCTACCCTGGTGGCTCCTTTGACCCCTTGGGCCTG
■■Homology search results ■■ -
sp_hit_id P20866
Definition sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens
Align length 190
Score (bit) 328.0
E-value 1.0e-89
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952605|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_I21, 5'
         (638 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   328   1e-89
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   328   1e-89
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   327   4e-89
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   325   1e-88
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   325   2e-88
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   324   2e-88
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   324   3e-88
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   324   3e-88
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   323   4e-88
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   323   5e-88
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   323   5e-88
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   323   6e-88
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   322   8e-88
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   322   1e-87
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   322   1e-87
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   320   3e-87
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   320   3e-87
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   320   3e-87
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   320   4e-87
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   320   5e-87
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   320   5e-87
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   319   7e-87
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   319   7e-87
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   319   9e-87
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   318   1e-86
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   318   1e-86
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   317   3e-86
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   317   3e-86
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   316   6e-86
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   315   1e-85

>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  328 bits (842), Expect = 1e-89
 Identities = 162/190 (85%), Positives = 176/190 (92%), Gaps = 3/190 (1%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 248
           GQ++ KP +ELS KV GNV EARV+MR+TVSKS  SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14  GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 249 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 428
            GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73  NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 429 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 608
           WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 192

Query: 609 PGGSFDPLGL 638
           PGGSFDPLGL
Sbjct: 193 PGGSFDPLGL 202



 Score = 30.8 bits (68), Expect = 6.2
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 258 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 407
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  328 bits (842), Expect = 1e-89
 Identities = 154/178 (86%), Positives = 166/178 (93%), Gaps = 4/178 (2%)
 Frame = +3

Query: 117 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 284
           KVG+ GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 285 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 464
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 465 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGL 638
           GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGL
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 196


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  327 bits (837), Expect = 4e-89
 Identities = 156/171 (91%), Positives = 162/171 (94%), Gaps = 2/171 (1%)
 Frame = +3

Query: 132 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 305
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 306 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 485
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 486 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGL 638
           PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGL
Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL 199


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  325 bits (833), Expect = 1e-88
 Identities = 162/183 (88%), Positives = 165/183 (90%), Gaps = 1/183 (0%)
 Frame = +3

Query: 93  KPQSELSSKVGNVGEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 269
           KP +ELS KVG  GEARV M    SK+ S S WYG DR  YLGPFSG  PSYL GEFPGD
Sbjct: 18  KPVNELSRKVG-AGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGD 76

Query: 270 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 449
           YGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 77  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136

Query: 450 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 629
           IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP
Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 196

Query: 630 LGL 638
           LGL
Sbjct: 197 LGL 199


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  325 bits (832), Expect = 2e-88
 Identities = 153/174 (87%), Positives = 161/174 (92%), Gaps = 4/174 (2%)
 Frame = +3

Query: 129 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 296
           +GE R++MRKT  K     S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28  IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 297 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 476
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 477 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGL 638
           LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGL
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 201


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  324 bits (831), Expect = 2e-88
 Identities = 158/190 (83%), Positives = 169/190 (88%), Gaps = 3/190 (1%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 248
           GQAV     +LS     + G  R++MRK V+KS  S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15  GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 249 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 428
            GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 429 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 608
           WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+Y
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 189

Query: 609 PGGSFDPLGL 638
           PGGSFDPLGL
Sbjct: 190 PGGSFDPLGL 199


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
           chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
          Length = 267

 Score =  324 bits (830), Expect = 3e-88
 Identities = 154/173 (89%), Positives = 162/173 (93%), Gaps = 4/173 (2%)
 Frame = +3

Query: 132 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 299
           G  +V+MRKTV+K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 300 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 479
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 480 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGL 638
           GNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGL
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL 201


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  324 bits (830), Expect = 3e-88
 Identities = 158/183 (86%), Positives = 166/183 (90%), Gaps = 4/183 (2%)
 Frame = +3

Query: 102 SELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 269
           S  SS+V   G  +V+MRKT SK    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGD
Sbjct: 20  SPSSSEV--TGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 77

Query: 270 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 449
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ
Sbjct: 78  YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 137

Query: 450 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 629
           IF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YPGGSFDP
Sbjct: 138 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDP 197

Query: 630 LGL 638
           LGL
Sbjct: 198 LGL 200


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
           chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
          Length = 267

 Score =  323 bits (829), Expect = 4e-88
 Identities = 154/173 (89%), Positives = 161/173 (93%), Gaps = 4/173 (2%)
 Frame = +3

Query: 132 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 299
           G  +V+MRKT SK    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 300 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 479
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 480 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGL 638
           GNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGL
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGL 201


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  323 bits (828), Expect = 5e-88
 Identities = 153/173 (88%), Positives = 161/173 (93%), Gaps = 4/173 (2%)
 Frame = +3

Query: 132 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 299
           G  RV+MRKT +K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 300 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 479
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 480 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGL 638
           GNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGL
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 201
tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 187
Score (bit) 340.0
E-value 6.0e-92
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952605|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_I21, 5'
         (638 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   340   6e-92
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   335   1e-90
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   335   1e-90
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   335   1e-90
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   335   2e-90
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   334   2e-90
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   332   2e-89
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   332   2e-89
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   331   3e-89
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   329   8e-89
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   328   1e-88
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   328   1e-88
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   328   2e-88
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten...   328   2e-88
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   327   3e-88
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ...   327   3e-88
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   327   3e-88
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   327   4e-88
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   327   4e-88
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   326   8e-88
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor...   325   1e-87
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   325   1e-87
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome...   325   1e-87
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   325   1e-87
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   325   1e-87
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ...   325   2e-87
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   325   2e-87
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   324   2e-87
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   324   3e-87
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   324   3e-87

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  340 bits (871), Expect = 6e-92
 Identities = 165/187 (88%), Positives = 174/187 (93%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 257
           GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 258 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 437
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 438 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 617
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGG
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGG 192

Query: 618 SFDPLGL 638
           SFDPLGL
Sbjct: 193 SFDPLGL 199


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  335 bits (860), Expect = 1e-90
 Identities = 165/189 (87%), Positives = 175/189 (92%), Gaps = 2/189 (1%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 251
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 432 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 611
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 612 GGSFDPLGL 638
           GGSFDPLGL
Sbjct: 194 GGSFDPLGL 202


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  335 bits (860), Expect = 1e-90
 Identities = 165/189 (87%), Positives = 175/189 (92%), Gaps = 2/189 (1%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 251
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 432 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 611
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 612 GGSFDPLGL 638
           GGSFDPLGL
Sbjct: 194 GGSFDPLGL 202


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  335 bits (859), Expect = 1e-90
 Identities = 163/192 (84%), Positives = 174/192 (90%), Gaps = 5/192 (2%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 242
           GQ V KPQ+E    VG V GE R++MRKT SK    SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16  GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 243 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 422
           YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 423 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDP 602
           AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DP
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDP 192

Query: 603 IYPGGSFDPLGL 638
           IYPGGSFDPLGL
Sbjct: 193 IYPGGSFDPLGL 204


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  335 bits (858), Expect = 2e-90
 Identities = 164/189 (86%), Positives = 175/189 (92%), Gaps = 2/189 (1%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 251
           GQ V KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 432 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 611
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 612 GGSFDPLGL 638
           GGSFDPLGL
Sbjct: 193 GGSFDPLGL 201


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  334 bits (857), Expect = 2e-90
 Identities = 163/189 (86%), Positives = 176/189 (93%), Gaps = 2/189 (1%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 251
           GQ++ KP +ELS KVGNV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 432 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 611
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 612 GGSFDPLGL 638
           GGSFDPLGL
Sbjct: 193 GGSFDPLGL 201


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  332 bits (850), Expect = 2e-89
 Identities = 162/189 (85%), Positives = 175/189 (92%), Gaps = 2/189 (1%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 251
           GQ++ KP +ELS KVG+  +ARV+MR+TV+KS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 432 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 611
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 612 GGSFDPLGL 638
           GGSFDPLGL
Sbjct: 193 GGSFDPLGL 201


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  332 bits (850), Expect = 2e-89
 Identities = 164/189 (86%), Positives = 174/189 (92%), Gaps = 2/189 (1%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 251
           GQ++ KP +ELS KVGNV EARVSMRK+ SKS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 432 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 611
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYP 192

Query: 612 GGSFDPLGL 638
           GGSFDPLGL
Sbjct: 193 GGSFDPLGL 201


>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1
          Length = 267

 Score =  331 bits (848), Expect = 3e-89
 Identities = 159/189 (84%), Positives = 177/189 (93%), Gaps = 2/189 (1%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 251
           GQ++++P +ELS KVGNV ++RV+MR+TV+KS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 252 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 431
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 432 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 611
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 612 GGSFDPLGL 638
           GGSFDPLGL
Sbjct: 193 GGSFDPLGL 201


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  329 bits (844), Expect = 8e-89
 Identities = 162/187 (86%), Positives = 170/187 (90%)
 Frame = +3

Query: 78  GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 257
           GQ++ KP +ELS KVG   EARVSMRK  S  SDS WYG DR K+LGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGT-SEARVSMRK--SSGSDSIWYGADRPKFLGPFSGETPSYLNGE 70

Query: 258 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 437
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 71  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 130

Query: 438 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 617
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGG
Sbjct: 131 AGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGG 190

Query: 618 SFDPLGL 638
           SFDPLGL
Sbjct: 191 SFDPLGL 197