BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952611|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_J03, 5'
         (485 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase...    33   0.88 
sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18 OS=Schizosa...    32   2.0  
sp|P83714|CTF2_MOUSE Cardiotrophin-2 OS=Mus musculus GN=Ctf2 PE=...    32   2.0  
sp|Q09578|COL75_CAEEL Putative cuticle collagen 75 OS=Caenorhabd...    31   3.4  

>sp|Q05787|HRD3_YEAST ERAD-associated E3 ubiquitin-protein ligase
           component HRD3 OS=Saccharomyces cerevisiae GN=HRD3 PE=1
           SV=1
          Length = 833

 Score = 32.7 bits (73), Expect = 0.88
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +2

Query: 44  TISPHLSVKRRLVYQRLFALQLGNSWLKSPMPRKWHVGFN--KQF-KNLFFYSDL 199
           T+ P  S K  L YQR  A QLGN   K  +  K++ GFN  + F K+L  Y D+
Sbjct: 165 TVIPQDSAKALLYYQR--AAQLGNLKAKQVLAYKYYSGFNVPRNFHKSLVLYRDI 217


>sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18
           OS=Schizosaccharomyces pombe GN=SPBC119.18 PE=2 SV=1
          Length = 69

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 128 SPMPRKWHVGFNKQFKNLFFYSDLHNREC 214
           +P  +K+   FN  + N F   DLHNR+C
Sbjct: 10  TPAKKKYDACFNDWYANKFLKGDLHNRDC 38


>sp|P83714|CTF2_MOUSE Cardiotrophin-2 OS=Mus musculus GN=Ctf2 PE=1
           SV=1
          Length = 204

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 129 ARCRESGMLGSTSSLRICFSIPICITENVYGSNPYSPNLFGKRKAGY 269
           AR R  G+LG+ +++     +PI   E+  G  P+  + F ++  GY
Sbjct: 132 ARLRAQGLLGNMAAIMTALGLPIPPEEDTLGFVPFGASAFERKCRGY 178


>sp|Q09578|COL75_CAEEL Putative cuticle collagen 75
           OS=Caenorhabditis elegans GN=col-75 PE=2 SV=1
          Length = 285

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = +3

Query: 81  YISACLPSSWGTVG*RARCRESGMLGSTSSLRICFSIPICITENVYGSN--PYSPNLFGK 254
           YI+ C P   G  G   +  + G+ G   S  I   +P  + + V+G    PY P    K
Sbjct: 80  YINTCPPGRIGITGPDGQPGKDGLPGMPGSPGIPGELPNILYQQVFGCRICPYGP----K 135

Query: 255 RKAGYK 272
            K+GYK
Sbjct: 136 GKSGYK 141

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952611|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_J03, 5'
         (485 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6ABI8|B6ABI8_9CRYT Putative uncharacterized protein OS=Crypt...    37   0.63 
tr|B5VNC5|B5VNC5_YEAS6 YLR207Wp-like protein OS=Saccharomyces ce...    33   9.1  
tr|B3RH96|B3RH96_YEAS1 Putative uncharacterized protein OS=Sacch...    33   9.1  
tr|A7A195|A7A195_YEAS7 HMG-CoA reductase degradation protein OS=...    33   9.1  

>tr|B6ABI8|B6ABI8_9CRYT Putative uncharacterized protein
            OS=Cryptosporidium muris RN66 GN=CMU_027500 PE=4 SV=1
          Length = 1841

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 113  NSWLKSPMPRKWHVGFNKQFKNLFFYSDLHNREC 214
            N WL  P  + W VG+NK   N ++ S++ N +C
Sbjct: 1626 NGWLTHPCIKSWDVGYNKSLGNKYYNSEILNFDC 1659


>tr|B5VNC5|B5VNC5_YEAS6 YLR207Wp-like protein OS=Saccharomyces
           cerevisiae (strain AWRI1631) GN=AWRI1631_122470 PE=4
           SV=1
          Length = 835

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +2

Query: 44  TISPHLSVKRRLVYQRLFALQLGNSWLKSPMPRKWHVGFN--KQF-KNLFFYSDL 199
           T+ P  S K  L YQR  A QLGN   K  +  K++ GFN  + F K+L  Y D+
Sbjct: 165 TVIPQDSAKALLYYQR--AAQLGNLKAKQVLAYKYYSGFNVPRNFHKSLVLYRDI 217


>tr|B3RH96|B3RH96_YEAS1 Putative uncharacterized protein
           OS=Saccharomyces cerevisiae (strain RM11-1a)
           GN=SCRG_04164 PE=4 SV=1
          Length = 835

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +2

Query: 44  TISPHLSVKRRLVYQRLFALQLGNSWLKSPMPRKWHVGFN--KQF-KNLFFYSDL 199
           T+ P  S K  L YQR  A QLGN   K  +  K++ GFN  + F K+L  Y D+
Sbjct: 165 TVIPQDSAKALLYYQR--AAQLGNLKAKQVLAYKYYSGFNVPRNFHKSLVLYRDI 217


>tr|A7A195|A7A195_YEAS7 HMG-CoA reductase degradation protein
           OS=Saccharomyces cerevisiae (strain YJM789) GN=HRD3 PE=4
           SV=1
          Length = 835

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +2

Query: 44  TISPHLSVKRRLVYQRLFALQLGNSWLKSPMPRKWHVGFN--KQF-KNLFFYSDL 199
           T+ P  S K  L YQR  A QLGN   K  +  K++ GFN  + F K+L  Y D+
Sbjct: 165 TVIPQDSAKALLYYQR--AAQLGNLKAKQVLAYKYYSGFNVPRNFHKSLVLYRDI 217