DK952612 |
Clone id |
TST38A01NGRL0014_J04 |
Library |
TST38 |
Length |
563 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_J04. 5' end sequence. |
Accession |
DK952612 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL731Contig1 |
Sequence |
CTGGACGACAATGCTTGGCGACTCTTGCTCAACCTGGAAGTATGTATAAGCTTGTGCTAC TGGATTTGTGGATGCCTGACATGGATGGCTATGAAGTGGCTATTCGCATTCAGAAGAACA TTCATCCTGAAAGACGTCCATTGATTATTGCATTGACGGCTGACACGGATAAAAGTACTC AGGATCGATGTTTGAAGGTGGGAATGGATGGTGTTGTGCTTAAGCCAGTTTCACTGATGG AGATGAGCAACAAGCTCTGCTCAATACTGCGGAGGGCAAAAGTTTATTACAATGTTCGGT GATGTTTGTACCTCAGCGAAAGTGGTTGTGTGTATGGTCAACCTGTGCAAATGCTTTCTA GAGCACATTGATTGTTGCTTTGGCAATGCCATGGCTCAACTTCAGAATCTAAACTCTTGG GGGTGTGAGGGATACAAGGCCCACTAAGCAGTGCAACTCAGCCGAAGGGCTTCTCTGAAG TACACCGAAATCAGCTCTTGGGACCGATGTCTGTGAAGAAGATAGTCTCTTCAGTCACAG TGAGGTAGTTATTTACCCTGTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XH57 |
Definition |
sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum |
Align length |
82 |
Score (bit) |
83.2 |
E-value |
8.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952612|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_J04, 5' (547 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum... 83 8e-16 sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum... 81 4e-15 sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=E... 79 1e-14 sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1... 79 2e-14 sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR... 76 1e-13 sp|P49333|ETR1_ARATH Ethylene receptor OS=Arabidopsis thaliana G... 76 1e-13 sp|O49230|ETR1_BRAOL Ethylene receptor OS=Brassica oleracea GN=E... 75 2e-13 sp|Q9SSY6|ETR1_CUCSA Ethylene receptor OS=Cucumis sativus GN=ETR... 74 5e-13 sp|O82436|ETR1_CUCMR Ethylene receptor OS=Cucumis melo var. reti... 74 5e-13 sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum... 74 6e-13 sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum... 72 2e-12 sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=E... 71 3e-12 sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase... 53 8e-07 sp|Q01473|RCAC_FREDI Protein rcaC OS=Fremyella diplosiphon GN=rc... 51 3e-06 sp|P0AEC4|ARCB_SHIFL Aerobic respiration control sensor protein ... 51 4e-06 sp|P0AEC3|ARCB_ECOLI Aerobic respiration control sensor protein ... 51 4e-06 sp|P58363|ARCB_ECO57 Aerobic respiration control sensor protein ... 51 4e-06 sp|Q52990|PHOB_RHIME Phosphate regulon transcriptional regulator... 50 5e-06 sp|P28835|YCF27_PORAE Probable transcriptional regulator ycf27 O... 50 7e-06 sp|Q54SP4|DHKD_DICDI Hybrid signal transduction histidine kinase... 50 7e-06 sp|P40138|CYAB_STIAU Adenylate cyclase 2 OS=Stigmatella aurantia... 49 2e-05 sp|P33112|SPAR_BACSU Transcriptional regulatory protein spaR OS=... 49 2e-05 sp|P22104|TCTD_SALTY Transcriptional regulatory protein tctD OS=... 48 3e-05 sp|P35163|RESD_BACSU Transcriptional regulatory protein resD OS=... 48 3e-05 sp|Q54W36|DHKH_DICDI Hybrid signal transduction histidine kinase... 48 3e-05 sp|P28257|YCF27_GALSU Probable transcriptional regulator ycf27 O... 48 4e-05 sp|Q9TLQ4|YCF27_CYACA Probable transcriptional regulator ycf27 O... 47 5e-05 sp|Q1XDC9|YCF27_PORYE Probable transcriptional regulator ycf27 O... 47 6e-05 sp|P51358|YCF27_PORPU Probable transcriptional regulator ycf27 O... 47 6e-05 sp|Q7A0U4|SRRA_STAAW Transcriptional regulatory protein srrA OS=... 47 6e-05
>sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1 Length = 741
Score = 83.2 bits (204), Expect = 8e-16 Identities = 39/82 (47%), Positives = 61/82 (74%), Gaps = 1/82 (1%) Frame = +3
Query: 45 YKLVLLDLWMPDMDGYEVAIRI-QKNIHPERRPLIIALTADTDKSTQDRCLKVGMDGVVL 221 YK+V +D+ MP++DG+E+A+RI +K + RPLI+ALT + D+ T+D C +VGM+GVVL Sbjct: 657 YKVVFMDVCMPEVDGFEIAVRIHEKFMTRHERPLIVALTGNIDQVTKDNCTRVGMEGVVL 716
Query: 222 KPVSLMEMSNKLCSILRRAKVY 287 KPVS+ +M N L ++L ++ Sbjct: 717 KPVSIDKMRNVLSNLLEHRVLF 738
>sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1 Length = 740
Score = 80.9 bits (198), Expect = 4e-15 Identities = 40/88 (45%), Positives = 65/88 (73%), Gaps = 1/88 (1%) Frame = +3
Query: 9 QCLATLAQPGSMYKLVLLDLWMPDMDGYEVAIRI-QKNIHPERRPLIIALTADTDKSTQD 185 +CL ++Q +K+V +D+ +P +DG+E+A+RI +K + RPLI+ALT++ DK T++ Sbjct: 648 ECLRMVSQD---HKVVFMDVRVPGLDGHELAVRIHEKFMKRHERPLIVALTSNADKVTKE 704
Query: 186 RCLKVGMDGVVLKPVSLMEMSNKLCSIL 269 CL+VGM+GV+LKPVS+ +M N L +L Sbjct: 705 NCLRVGMEGVILKPVSVDKMRNVLSKLL 732
>sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=2 SV=1 Length = 738
Score = 79.3 bits (194), Expect = 1e-14 Identities = 40/95 (42%), Positives = 63/95 (66%), Gaps = 1/95 (1%) Frame = +3
Query: 3 GRQCLATLAQPGSMYKLVLLDLWMPDMDGYEVAIRIQKNIHPER-RPLIIALTADTDKST 179 G +CL L Q +K+V +D+ +P +D YEVA++I + RPLI+ALT +TD+ T Sbjct: 644 GDECLRVLTQE---HKVVFMDVSIPGIDCYEVAVQIHEKFGKHHNRPLIVALTGNTDRVT 700
Query: 180 QDRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKV 284 ++ C++VGMDGV+LKPVS+ +M + L +L + Sbjct: 701 KENCMRVGMDGVILKPVSVDKMRSVLSELLEHGVI 735
>sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1 Length = 738
Score = 78.6 bits (192), Expect = 2e-14 Identities = 36/82 (43%), Positives = 59/82 (71%), Gaps = 1/82 (1%) Frame = +3
Query: 45 YKLVLLDLWMPDMDGYEVAIRI-QKNIHPERRPLIIALTADTDKSTQDRCLKVGMDGVVL 221 +K+V +D+ MP +DGYE+A+RI +K RP+++ALT + DK T++ C++VGMDGV+L Sbjct: 654 HKVVFMDVCMPGIDGYELAVRIHEKFTKRHERPVLVALTGNIDKMTKENCMRVGMDGVIL 713
Query: 222 KPVSLMEMSNKLCSILRRAKVY 287 KPVS+ +M + L +L ++ Sbjct: 714 KPVSVDKMRSVLSELLEHRVLF 735
>sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1 Length = 741
Score = 75.9 bits (185), Expect = 1e-13 Identities = 35/82 (42%), Positives = 58/82 (70%), Gaps = 1/82 (1%) Frame = +3
Query: 45 YKLVLLDLWMPDMDGYEVAIRI-QKNIHPERRPLIIALTADTDKSTQDRCLKVGMDGVVL 221 +K+V +D+ MP +DGYE+A+RI +K RP+++ALT DK T++ C++VG+DGV+L Sbjct: 657 HKVVFMDVSMPGIDGYELAVRIHEKFTKRHERPVLVALTGSIDKITKENCMRVGVDGVIL 716
Query: 222 KPVSLMEMSNKLCSILRRAKVY 287 KPVS+ +M + L +L ++ Sbjct: 717 KPVSVDKMRSVLSELLEHRVLF 738
>sp|P49333|ETR1_ARATH Ethylene receptor OS=Arabidopsis thaliana GN=ETR1 PE=1 SV=1 Length = 738
Score = 75.9 bits (185), Expect = 1e-13 Identities = 36/95 (37%), Positives = 64/95 (67%), Gaps = 2/95 (2%) Frame = +3
Query: 9 QCLATLAQPGSMYKLVLLDLWMPDMDGYEVAIRIQKNIHPER--RPLIIALTADTDKSTQ 182 +CL ++ +K+V +D+ MP ++ Y++A+RI + +R RPL++AL+ +TDKST+ Sbjct: 644 ECLRVVSHE---HKVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTK 700
Query: 183 DRCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 287 ++C+ G+DGV+LKPVSL + + L +L +Y Sbjct: 701 EKCMSFGLDGVLLKPVSLDNIRDVLSDLLEPRVLY 735
>sp|O49230|ETR1_BRAOL Ethylene receptor OS=Brassica oleracea GN=ETR1 PE=2 SV=1 Length = 735
Score = 75.1 bits (183), Expect = 2e-13 Identities = 37/94 (39%), Positives = 62/94 (65%), Gaps = 1/94 (1%) Frame = +3
Query: 9 QCLATLAQPGSMYKLVLLDLWMPDMDGYEVAIRI-QKNIHPERRPLIIALTADTDKSTQD 185 +CL ++ +++V +D+ P ++ Y++A+RI +K +RPL++ALT +TDKST++ Sbjct: 642 ECLRVVSHE---HRVVFMDVCTPGVENYQIALRIHEKFTKRHQRPLLVALTGNTDKSTKE 698
Query: 186 RCLKVGMDGVVLKPVSLMEMSNKLCSILRRAKVY 287 +C+ G+DGV+LKPVSL M N L L +Y Sbjct: 699 KCMSFGLDGVLLKPVSLDNMRNVLSDRLEHRVLY 732
>sp|Q9SSY6|ETR1_CUCSA Ethylene receptor OS=Cucumis sativus GN=ETR1 PE=2 SV=1 Length = 740
Score = 73.9 bits (180), Expect = 5e-13 Identities = 33/82 (40%), Positives = 57/82 (69%), Gaps = 1/82 (1%) Frame = +3
Query: 45 YKLVLLDLWMPDMDGYEVAIRIQKNIHP-ERRPLIIALTADTDKSTQDRCLKVGMDGVVL 221 +K+V +D+ P +DGYE+AIRI++ RP ++ LT ++DK T++ CL+ GMDG++L Sbjct: 656 HKVVFMDICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGLIL 715
Query: 222 KPVSLMEMSNKLCSILRRAKVY 287 KPVS+ +M + L ++ R ++ Sbjct: 716 KPVSIDKMRSVLSELIERRVLF 737
>sp|O82436|ETR1_CUCMR Ethylene receptor OS=Cucumis melo var. reticulatus GN=ETR1 PE=2 SV=1 Length = 740
Score = 73.9 bits (180), Expect = 5e-13 Identities = 33/82 (40%), Positives = 57/82 (69%), Gaps = 1/82 (1%) Frame = +3
Query: 45 YKLVLLDLWMPDMDGYEVAIRIQKNIHP-ERRPLIIALTADTDKSTQDRCLKVGMDGVVL 221 +K+V +D+ P +DGYE+AIRI++ RP ++ LT ++DK T++ CL+ GMDG++L Sbjct: 656 HKVVFMDICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGLIL 715
Query: 222 KPVSLMEMSNKLCSILRRAKVY 287 KPVS+ +M + L ++ R ++ Sbjct: 716 KPVSIDKMRSVLSELIERRVLF 737
>sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=2 SV=1 Length = 754
Score = 73.6 bits (179), Expect = 6e-13 Identities = 36/81 (44%), Positives = 56/81 (69%), Gaps = 1/81 (1%) Frame = +3
Query: 45 YKLVLLDLWMPDMDGYEVAIRIQKNIHPER-RPLIIALTADTDKSTQDRCLKVGMDGVVL 221 +K+V++D+ M +D YEVA+ I + RPLI+ALT +TD+ T++ C++VGMDGV+L Sbjct: 671 HKVVIMDVSMQGIDCYEVAVVIHERFGKRHGRPLIVALTGNTDRVTKENCMRVGMDGVIL 730
Query: 222 KPVSLMEMSNKLCSILRRAKV 284 KPVS+ +M + L +L V Sbjct: 731 KPVSVYKMRSVLSELLEHGVV 751
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9ST35 |
Definition |
tr|A9ST35|A9ST35_PHYPA ETR2 ethylene receptor OS=Physcomitrella patens subsp. patens |
Align length |
93 |
Score (bit) |
113.0 |
E-value |
6.0e-24 |
Report |
|