DK952628 [AcEST]

DK952628
Clone id	TST38A01NGRL0014_J20
Library	TST38
Length	757
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_J20. 5' end sequence.
Accession	DK952628
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL1106Contig1
Sequence	GAAGGTGGACTTGATATGTTTGTCGATGCGTTGAAAATGAAGGAGGAGGCAGCTGCCCTA GCATCACTATCCATGGATGGGTGATTACAAGGTGCTATTCACACTCATAAGTTATGTGAG CTGTTTCATTAAGATCTCAGCATACAGCAGCAGGTCCTAGTGAAGCTGTCTGAATCGACT TGAAGTGGGGCTTTATTGGCCATTCATTAATTTCTTGACACCTGCTGCTGTTGCATATGC TCTACACATATCGTCCTTGAAGTGGTCAAGCTTTTTGATCATTACCGCTTTAAAAGGCAA TCCTGTCTTCAAATTGGGGTTAGAGACAATCGTTACTTGAAGTGGTCAAGCTTTTTGATC ATGGCCGCTTTAAAAGGCAATCCTGTCTTCAAAGTGGGGTTAGAGACAATGAAGATGTAG CACTGATAGATGTTGATTATAAAGTTCCAGTCATTAGTATGTACATTGGAAAAGTGTTTC AAGTAGCCTTTATTGGCACAGAAAAATGAGTACCTGCTAGATGGGACTTTGTGTATATGT ATACTTTCAATTCATCAAATGCTACCCATTCGAAAAAAAATTTTTTCAGGCTCCATTATG CGAAATCAAGCAAGGCAAGCCTTGCTAATGGAAGTATTTTGATACGTTTGCCCTTTCTTC CCAAAATGCCGTTCCTGAAAAATTTTACCTTCAAAATTTTCCTTATTAATGAAAGGCACC CAATTTTCCCCCAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P57248
Definition	sp\|P57248\|LSPA_BUCAI Lipoprotein signal peptidase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
Align length	28
Score (bit)	30.8
E-value	7.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK952628\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_J20, 5' (732 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P57248\|LSPA_BUCAI Lipoprotein signal peptidase OS=Buchnera ap... 31 7.9 >sp\|P57248\|LSPA_BUCAI Lipoprotein signal peptidase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=lspA PE=3 SV=1 Length = 160 Score = 30.8 bits (68), Expect = 7.9 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -2 Query: 488 GYLKHFSNVHTNDWNF-IINIYQCYIFI 408 G++ F ++H NDW+F NI C IFI Sbjct: 121 GFVVDFIDIHINDWHFATFNIADCSIFI 148
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A5E1X7
Definition	tr\|A5E1X7\|A5E1X7_LODEL Putative uncharacterized protein OS=Lodderomyces elongisporus
Align length	94
Score (bit)	34.7
E-value	6.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK952628\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_J20, 5' (732 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A5E1X7\|A5E1X7_LODEL Putative uncharacterized protein OS=Lodde... 35 6.7 >tr\|A5E1X7\|A5E1X7_LODEL Putative uncharacterized protein OS=Lodderomyces elongisporus GN=LELG_03614 PE=4 SV=1 Length = 1056 Score = 34.7 bits (78), Expect = 6.7 Identities = 27/94 (28%), Positives = 41/94 (43%) Frame = +3 Query: 348 KLFDHGRFKRQSCLQSGVRDNEDVALIDVDYKVPVISMYIGKVFQVAFIGTEK*VPARWD 527 K ++ R R S + G + D+A ID D+ VPV S G+V + Sbjct: 242 KRLENNREDRSSTIIEGNESSTDIATIDSDFGVPVDSK--GQVL---------------N 284 Query: 528 FVYMYTFNSSNATHSKKNFFRLHYAKSSKASLAN 629 +Y +F S+ THS + H +KS S +N Sbjct: 285 NLYNLSFASNTKTHSNSKYKFKHNSKSKSKSNSN 318