DK952638 |
Clone id |
TST38A01NGRL0014_K06 |
Library |
TST38 |
Length |
632 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_K06. 5' end sequence. |
Accession |
DK952638 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL149Contig1 |
Sequence |
CTCGTCTGTCTGTGTCTGTGCATTGAGGTCTACTCTGTCCGTCGAACTGCTCCGTGGACT CCGCTGTAAAGACTCCATACCGCGTTGCTCTGTGTGTGTGTGTGTGTGTGTGTGGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCCCTTTGTATCATGGCCCCCCAAATTC TGTTGCAGCAGTTGGCTTCTGGCGTTGGTGTTCTTGCAGGAGCCTTCATGGTCAAGTCTT TACTTGATTCACAGAACAACAGCCATGTCTCCTCTGCGTTTCCTCGGTGTCCCACCTGCA ATGGAACAAGGAGAGTCCCTTGCCTTTGCAACCGCTGGTCCGATGGGGATGTGGGATGTC GCTCTTGCGGGGGTACGGGCATGAGTGTGTGCAACAGCTGTGGCGGATCCGGCACCGGCA GGCCTCTTCCTGTAAGCATTCGACCCTCTTCGGTTCCTCGCAGTTCACAAAGCCCCCCAT CATGAGACAGGTACTCTCATTACAACAATCCTTTTCCCAAGAGGGAAAGGCAATTGTGAG GAACTTAAGTTTGGAAGGTCTCCTCTTGATGTCAATGACGAGGAGGCTGCGACACGATTA TTTGGCATGTCAAAGCAATTATTGTGGTCAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P35191 |
Definition |
sp|P35191|MDJ1_YEAST DnaJ homolog 1, mitochondrial OS=Saccharomyces cerevisiae |
Align length |
71 |
Score (bit) |
35.4 |
E-value |
0.25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952638|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_K06, 5' (632 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P35191|MDJ1_YEAST DnaJ homolog 1, mitochondrial OS=Saccharomy... 35 0.25 sp|Q01279|EGFR_MOUSE Epidermal growth factor receptor OS=Mus mus... 35 0.25 sp|A5IIT4|DNAJ_THEP1 Chaperone protein dnaJ OS=Thermotoga petrop... 35 0.32 sp|Q80WJ1|GGN_MOUSE Gametogenetin OS=Mus musculus GN=Ggn PE=1 SV=2 35 0.42 sp|Q9WZV3|DNAJ_THEMA Chaperone protein dnaJ OS=Thermotoga mariti... 35 0.42 sp|O27352|DNAJ_METTH Chaperone protein dnaJ OS=Methanobacterium ... 34 0.72 sp|Q66HC8|GGN_RAT Gametogenetin OS=Rattus norvegicus GN=Ggn PE=2... 33 0.93 sp|P13387|EGFR_CHICK Epidermal growth factor receptor (Fragment)... 33 0.93 sp|Q9Y2M2|CC032_HUMAN Uncharacterized protein C3orf32 OS=Homo sa... 33 0.93 sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial OS... 33 1.2 sp|P87239|MDJ1_SCHPO DnaJ homolog 1, mitochondrial OS=Schizosacc... 33 1.6 sp|Q182E7|DNAJ_CLOD6 Chaperone protein dnaJ OS=Clostridium diffi... 33 1.6 sp|Q8C3L1|CC032_MOUSE Uncharacterized protein C3orf32 homolog OS... 33 1.6 sp|P53940|YNH7_YEAST Uncharacterized J domain-containing protein... 32 2.1 sp|Q7UA76|DNAJ_SYNPX Chaperone protein dnaJ OS=Synechococcus sp.... 32 2.1 sp|Q52702|DNAJ_RHOCA Chaperone protein dnaJ OS=Rhodobacter capsu... 32 2.1 sp|P20730|CHHB2_BOMMO Chorion class high-cysteine HCB protein 13... 32 2.1 sp|Q58598|Y1198_METJA Uncharacterized protein MJ1198 OS=Methanoc... 32 2.7 sp|P26372|KRUC_SHEEP Keratin, ultra high-sulfur matrix protein O... 32 2.7 sp|Q6L8G5|KR510_HUMAN Keratin-associated protein 5-10 OS=Homo sa... 32 2.7 sp|Q114R3|DNAJ_TRIEI Chaperone protein dnaJ OS=Trichodesmium ery... 32 2.7 sp|A2SIR5|DNAJ_METPP Chaperone protein dnaJ OS=Methylibium petro... 32 2.7 sp|A1BHL1|DNAJ_CHLPD Chaperone protein dnaJ OS=Chlorobium phaeob... 32 2.7 sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sa... 32 2.7 sp|Q145F0|DNAJ_BURXL Chaperone protein dnaJ OS=Burkholderia xeno... 29 2.8 sp|Q4V896|SNX15_RAT Sorting nexin-15 OS=Rattus norvegicus GN=Snx... 32 3.5 sp|Q9D226|KRA53_MOUSE Keratin-associated protein 5-3 OS=Mus musc... 32 3.5 sp|Q701N4|KRA52_HUMAN Keratin-associated protein 5-2 OS=Homo sap... 32 3.5 sp|P0C5Y4|KRA14_HUMAN Keratin-associated protein 1-4 OS=Homo sap... 32 3.5 sp|Q9BYP8|KR171_HUMAN Keratin-associated protein 17-1 OS=Homo sa... 32 3.5
>sp|P35191|MDJ1_YEAST DnaJ homolog 1, mitochondrial OS=Saccharomyces cerevisiae GN=MDJ1 PE=1 SV=1 Length = 511
Score = 35.4 bits (80), Expect = 0.25 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 11/71 (15%) Frame = +3
Query: 237 SLLDSQNNSHVSSAFPRCPTCNGTRRVPCLCNRWSDGDVGCRSCGGTG-----------M 383 ++ S+N SA C TC+GT P + V C +C GTG M Sbjct: 213 AVFGSKNVQLRFSALDPCSTCSGTGMKP------NTHKVSCSTCHGTGTTVHIRGGFQMM 266
Query: 384 SVCNSCGGSGT 416 S C +C G GT Sbjct: 267 STCPTCNGEGT 277
>sp|Q01279|EGFR_MOUSE Epidermal growth factor receptor OS=Mus musculus GN=Egfr PE=1 SV=1 Length = 1210
Score = 35.4 bits (80), Expect = 0.25 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 6/83 (7%) Frame = -3
Query: 588 SLLVIDIKRRPSKLKFLTIAFPSWEKDCCNESTCLMMGGFVNCEEPKRVECLQEEACRCR 409 S + +D++ PS P + C N S GG NC++ ++ C Q+ + RCR Sbjct: 174 SNMSMDLQSHPSSC-------PKCDPSCPNGSC--WGGGEENCQKLTKIICAQQCSHRCR 224
Query: 408 IR------HSCCTHSCPYPRKSD 358 R H+ C C PR+SD Sbjct: 225 GRSPSDCCHNQCAAGCTGPRESD 247
>sp|A5IIT4|DNAJ_THEP1 Chaperone protein dnaJ OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=dnaJ PE=3 SV=1 Length = 369
Score = 35.0 bits (79), Expect = 0.32 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Frame = +3
Query: 270 SSAFPRCPTCNGTRRVPCLCNRWSDGDVG---CRSCGGTGM---SVCNSCGGSG 413 ++ + CP+C GT R+ + V C CGGTG C+ CGGSG Sbjct: 167 NAGYINCPSCGGTGRIREERRSFFGYFVSERTCERCGGTGKIPREYCHECGGSG 220
Score = 34.3 bits (77), Expect = 0.55 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 18/77 (23%) Frame = +3
Query: 237 SLLDSQNNSHVSSAFPR---CPTCNGTRRVPCLCNRWSDGDVGCRSCGGTGM-------- 383 +L D N + + + R CP C GT P + G + C SCGGTG Sbjct: 136 TLSDLINGAEIPVEYERYETCPRCGGTGVEP------NAGYINCPSCGGTGRIREERRSF 189
Query: 384 -------SVCNSCGGSG 413 C CGG+G Sbjct: 190 FGYFVSERTCERCGGTG 206
>sp|Q80WJ1|GGN_MOUSE Gametogenetin OS=Mus musculus GN=Ggn PE=1 SV=2 Length = 673
Score = 34.7 bits (78), Expect = 0.42 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Frame = -2
Query: 406 PPQLLHTLMPVPPQERHPTSPSDQRLQRQGTLLVPLQVGHRGNAEETWLLFCE------S 245 PP + TL+P P + R PT S R++ L+ HRG + L + Sbjct: 99 PPPPVGTLLPAPSKWRKPTGTSVPRIRGL------LEASHRGQGDPPSLRPLPPLPRQLT 152
Query: 244 SKDLTMKAPARTPTP 200 KD ++APA PTP Sbjct: 153 EKDPVLRAPAPPPTP 167
>sp|Q9WZV3|DNAJ_THEMA Chaperone protein dnaJ OS=Thermotoga maritima GN=dnaJ PE=3 SV=1 Length = 369
Score = 34.7 bits (78), Expect = 0.42 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Frame = +3
Query: 270 SSAFPRCPTCNGTRRVPCLCNRWSDGDVG---CRSCGGTGM---SVCNSCGGSG 413 ++ + CP+C GT R+ + V C CGGTG C+ CGGSG Sbjct: 167 NAGYMDCPSCGGTGRIREERRSFFGYFVSERTCERCGGTGKIPREYCHECGGSG 220
Score = 33.1 bits (74), Expect = 1.2 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 18/77 (23%) Frame = +3
Query: 237 SLLDSQNNSHVSSAFPR---CPTCNGTRRVPCLCNRWSDGDVGCRSCGGTGM-------- 383 +L D N + + + R CP C GT P + G + C SCGGTG Sbjct: 136 TLSDLINGAEIPVEYERYETCPRCGGTGVEP------NAGYMDCPSCGGTGRIREERRSF 189
Query: 384 -------SVCNSCGGSG 413 C CGG+G Sbjct: 190 FGYFVSERTCERCGGTG 206
>sp|O27352|DNAJ_METTH Chaperone protein dnaJ OS=Methanobacterium thermoautotrophicum GN=dnaJ PE=3 SV=1 Length = 376
Score = 33.9 bits (76), Expect = 0.72 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Frame = +3
Query: 237 SLLDSQNNSHVSSAFP---RCPTCNGTRRVPCLCNRWSDGDVGCRSCGGTGMSVCNSCGG 407 SL D+ N P +CP C+G+R P GTG C +CGG Sbjct: 128 SLEDAYNGLETDIRVPHTKKCPVCHGSRAEP-----------------GTGTRTCQTCGG 170
Query: 408 SG 413 SG Sbjct: 171 SG 172
>sp|Q66HC8|GGN_RAT Gametogenetin OS=Rattus norvegicus GN=Ggn PE=2 SV=1 Length = 658
Score = 33.5 bits (75), Expect = 0.93 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Frame = -2
Query: 406 PPQLLHTLMPVPPQERHPTSPSDQRLQRQGTLLVPLQVGHRGNAEETWLLFCE------S 245 PP + TL+P P + R PT + R++ L+ HRG + L + Sbjct: 101 PPPPVGTLLPAPSKWRKPTGTAVPRIRGL------LEASHRGQGDPPSLRPLPPLPRQLT 154
Query: 244 SKDLTMKAPARTPTP 200 KD ++APA PTP Sbjct: 155 EKDPVLRAPAPPPTP 169
>sp|P13387|EGFR_CHICK Epidermal growth factor receptor (Fragment) OS=Gallus gallus GN=EGFR PE=2 SV=1 Length = 703
Score = 33.5 bits (75), Expect = 0.93 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 12/86 (13%) Frame = -3
Query: 579 VIDIKRRPSKLKFLTIAFPSWEKDC------CNESTCLMMGGFVNCEEPKRVECLQEEAC 418 +ID R+P + F S C C E C G NC+ +V C Q+ + Sbjct: 174 IIDTSRKP----LTVLDFASNLSSCPKCHPNCTEDHC-WGAGEQNCQTLTKVICAQQCSG 228
Query: 417 RCRIR------HSCCTHSCPYPRKSD 358 RCR + H+ C C PR+SD Sbjct: 229 RCRGKVPSDCCHNQCAAGCTGPRESD 254
>sp|Q9Y2M2|CC032_HUMAN Uncharacterized protein C3orf32 OS=Homo sapiens GN=C3orf32 PE=2 SV=1 Length = 353
Score = 33.5 bits (75), Expect = 0.93 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3
Query: 285 RCPTCNGTRRVPCLCNRWSDGDVGCRSCGGTGMSVCNSCGGSG 413 RCP+C G +R R C+ C G+G C++C G G Sbjct: 176 RCPSCCGAKRKAKQSRR-------CQLCAGSGRRRCSTCSGRG 211
>sp|Q38813|DNAJ1_ARATH Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana GN=ATJ1 PE=2 SV=2 Length = 408
Score = 33.1 bits (74), Expect = 1.2 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +3
Query: 273 SAFPRCPTCNGTRRVPCLCNRWSDGDVGCRSCGGTGMSV---CNSCGGSG 413 +A CPTC G RV C++C GTG + C SC GSG Sbjct: 198 AAMSICPTCRGVGRVTI-----PPFTASCQTCKGTGHIIKEYCMSCRGSG 242
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NK57 |
Definition |
tr|A9NK57|A9NK57_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
90 |
Score (bit) |
117.0 |
E-value |
7.0e-25 |
Report |
|