DK952645 |
Clone id |
TST38A01NGRL0014_K13 |
Library |
TST38 |
Length |
586 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_K13. 5' end sequence. |
Accession |
DK952645 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2620Contig1 |
Sequence |
ACCAGCAGCTCGCTTGAAACTCTGTCTGTGATTGCGAGAAGTAGCTTCCGGATTTTATGC TGATGTGAAGATCTGCGTGTAAAGCTGATACGTTCTGGAGACCGTTTGTAGGCAGATGGA GGAGCATCCGAAAGATGATCATCGATTTGATGCCTCTCAATATGCTTTCTTTGGTGGAGA GGTAAGCCAAGAGGTTGAGCTTGGTGGTCTCGATGAAGAGGACGATGTTGCTCTGGGTGG TGCTCTTGAGGAGGAGGGGGGGGTCCTTCTTGGGCTGAGTGAAAAAGATGAGGTGGAGGC TTTAGATAATGTATCACATTTGGATGACGTTTCCGCGGACATATCTGAAATTAGTAGATC CTACATGAACCTGGGACTTAATGAACCGGAATCAGATCATGATGCTCACAGCTGGTATGG CAATCATCAGCGACAGTTCATGCAGGATGCGCATGGGATGCACTCGGCCAATTTTCTCTC ACAGAGGCATTGGGCTGGGGAGTCAGAATACCCTCAGTCGCCTCAGTCGCCATTTGCGAT GTCTGGGCCTTATCCCAAGATGCGTCCTCAAGGACCAACACCAATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P14598 |
Definition |
sp|P14598|NCF1_HUMAN Neutrophil cytosol factor 1 OS=Homo sapiens |
Align length |
100 |
Score (bit) |
40.8 |
E-value |
0.005 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6GAR6 |
Definition |
tr|B6GAR6|B6GAR6_9ACTN Putative uncharacterized protein OS=Collinsella stercoris DSM 13279 |
Align length |
53 |
Score (bit) |
35.8 |
E-value |
1.7 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952645|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_K13, 5' (573 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6GAR6|B6GAR6_9ACTN Putative uncharacterized protein OS=Colli... 36 1.7 tr|A8PGR4|A8PGR4_COPC7 Predicted protein OS=Coprinopsis cinerea ... 35 2.3 tr|A9YUA7|A9YUA7_PIG Neutrophil cytosolic factor 1 OS=Sus scrofa... 35 2.9 tr|B7GEQ0|B7GEQ0_PHATR Predicted protein OS=Phaeodactylum tricor... 35 3.8 tr|Q8I2V4|Q8I2V4_PLAF7 Putative uncharacterized protein PFI0975c... 34 5.0 tr|B4RE04|B4RE04_PHEZH Putative uncharacterized protein OS=Pheny... 34 6.5 tr|A7SAP3|A7SAP3_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 6.5 tr|B4DMD3|B4DMD3_HUMAN cDNA FLJ58174, highly similar to WW domai... 34 6.5 tr|Q2UFM5|Q2UFM5_ASPOR Predicted protein OS=Aspergillus oryzae G... 34 6.5 tr|Q08E33|Q08E33_BOVIN KIAA1737 OS=Bos taurus GN=KIAA1737 PE=2 SV=1 33 8.6 tr|B5E164|B5E164_DROPS GA24820 OS=Drosophila pseudoobscura pseud... 33 8.6 tr|B4GQ73|B4GQ73_DROPE GL15773 OS=Drosophila persimilis GN=GL157... 33 8.6 tr|B4DY34|B4DY34_HUMAN cDNA FLJ60194, highly similar to WW domai... 33 8.6 tr|B8NGS1|B8NGS1_ASPFL Putative uncharacterized protein OS=Asper... 33 8.6
>tr|B6GAR6|B6GAR6_9ACTN Putative uncharacterized protein OS=Collinsella stercoris DSM 13279 GN=COLSTE_01166 PE=4 SV=1 Length = 489
Score = 35.8 bits (81), Expect = 1.7 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +1
Query: 328 ISEISRSYMNLGLNEPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRHWAG 486 I+EI+ + LG N+P SD D Y + QF+ AH + A+ +S + G Sbjct: 196 INEINNTIQFLGANKPASDEDFQRAYQHLHHQFLASAHAVKMAHEISDDYRVG 248
>tr|A8PGR4|A8PGR4_COPC7 Predicted protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_09953 PE=4 SV=1 Length = 972
Score = 35.4 bits (80), Expect = 2.3 Identities = 20/70 (28%), Positives = 32/70 (45%) Frame = +1
Query: 361 GLNEPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRHWAGESEYPQSPQSPFAMSGPY 540 G+ P H ++ N +R+ D HG+ + +S+R GE++ P P P Sbjct: 220 GMMAPGGMHKGNTPISNLKRE-RPDEHGVDNIGNISKRQNTGENKMMPPPSIPMNPGQPN 278
Query: 541 PKMRPQGPTP 570 P+ P PTP Sbjct: 279 PQNMPNQPTP 288
>tr|A9YUA7|A9YUA7_PIG Neutrophil cytosolic factor 1 OS=Sus scrofa PE=2 SV=1 Length = 392
Score = 35.0 bits (79), Expect = 2.9 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 4/102 (3%) Frame = +1
Query: 271 KDEVEALDNVSHLDDVSADISEISRSYMNLGLNEPESD-HDAHSWYGNHQRQFMQDAHGM 447 K+++ +L D++E + G S H+AHS + +++ QDA+ Sbjct: 268 KEDITGYFPSMYLQKAGQDVAEAQSKIKSRGAPPRRSSIHNAHSIHQRSRKRISQDAYRR 327
Query: 448 HSANFLSQRHWAGESEYPQSPQSPFAMSGP---YPKMRPQGP 564 +S FL QR S PQ +P P PK +P P Sbjct: 328 NSVRFLQQRQRQPRSG-PQRAGNPLQKEQPKTERPKPQPAVP 368
>tr|B7GEQ0|B7GEQ0_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1 GN=PHATRDRAFT_41620 PE=4 SV=1 Length = 347
Score = 34.7 bits (78), Expect = 3.8 Identities = 13/50 (26%), Positives = 24/50 (48%) Frame = +1
Query: 400 WYGNHQRQFMQDAHGMHSANFLSQRHWAGESEYPQSPQSPFAMSGPYPKM 549 W QR F+ +A+G+ + ++ W E + P +P + P PK+ Sbjct: 76 WIDREQRYFISNAYGLTPGSLYIRKQWRQEDQAPNAPTTQVTPEVPQPKV 125
>tr|Q8I2V4|Q8I2V4_PLAF7 Putative uncharacterized protein PFI0975c OS=Plasmodium falciparum (isolate 3D7) GN=PFI0975c PE=4 SV=1 Length = 3381
Score = 34.3 bits (77), Expect = 5.0 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +1
Query: 331 SEISRSYMNLGLN--EPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRH 477 SEI+ S N+G + + E H HS +G H + D HG H + +H Sbjct: 2897 SEINNSVSNMGNDTIKREDQHGKHSQHGKHDQHGKHDQHGKHDQHGKHDQH 2947
>tr|B4RE04|B4RE04_PHEZH Putative uncharacterized protein OS=Phenylobacterium zucineum (strain HLK1) GN=PHZ_c2026 PE=4 SV=1 Length = 315
Score = 33.9 bits (76), Expect = 6.5 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = +1
Query: 478 WAGESEYPQSPQSPFAMSGPYPKMRPQGPTP 570 +A S +P+ PQ+PF + GP PK PQ P P Sbjct: 10 FARNSAWPKMPQAPFRV-GPLPKAAPQAPPP 39
>tr|A7SAP3|A7SAP3_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g111203 PE=4 SV=1 Length = 69
Score = 33.9 bits (76), Expect = 6.5 Identities = 19/61 (31%), Positives = 24/61 (39%) Frame = +1
Query: 373 PESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRHWAGESEYPQSPQSPFAMSGPYPKMR 552 P SD+ HS YG H A+G HSA + + P S P GP+ Sbjct: 2 PHSDYGPHSAYGPHSAYGPHSAYGPHSAYGPHSAYGPHSAYGPHSAYGPLLAYGPHSAYG 61
Query: 553 P 555 P Sbjct: 62 P 62
>tr|B4DMD3|B4DMD3_HUMAN cDNA FLJ58174, highly similar to WW domain-binding protein 11 OS=Homo sapiens PE=2 SV=1 Length = 589
Score = 33.9 bits (76), Expect = 6.5 Identities = 24/82 (29%), Positives = 36/82 (43%) Frame = +1
Query: 325 DISEISRSYMNLGLNEPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRHWAGESEYPQ 504 +I E R ++ E D D Q+Q +++H ++ SQ+ +S P Sbjct: 341 EIPEEGREVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPS 400
Query: 505 SPQSPFAMSGPYPKMRPQGPTP 570 Q+P M GP P RP GP P Sbjct: 401 QIQAP-PMPGP-PPGRPPGPPP 420
>tr|Q2UFM5|Q2UFM5_ASPOR Predicted protein OS=Aspergillus oryzae GN=AO090026000147 PE=4 SV=1 Length = 238
Score = 33.9 bits (76), Expect = 6.5 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Frame = +1
Query: 496 YPQS-PQSPFAMSGPYPKMRPQGPTP 570 YPQ PQ P+ +GPY + PQGP P Sbjct: 128 YPQQFPQQPYPQTGPYQQYPPQGPYP 153
>tr|Q08E33|Q08E33_BOVIN KIAA1737 OS=Bos taurus GN=KIAA1737 PE=2 SV=1 Length = 398
Score = 33.5 bits (75), Expect = 8.6 Identities = 23/75 (30%), Positives = 36/75 (48%) Frame = +1
Query: 331 SEISRSYMNLGLNEPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRHWAGESEYPQSP 510 SE+ ++ LGL ESD D S + + + + A M S + LS W+ E + P+ Sbjct: 22 SEMKKAARQLGLAAAESDKD--SGFSDGSSECLSSAEQMESEDMLSALGWSREDK-PRPS 78
Query: 511 QSPFAMSGPYPKMRP 555 P SG +P + P Sbjct: 79 SKP--ASGAFPTLSP 91
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