DK952645
Clone id TST38A01NGRL0014_K13
Library
Length 586
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_K13. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
ACCAGCAGCTCGCTTGAAACTCTGTCTGTGATTGCGAGAAGTAGCTTCCGGATTTTATGC
TGATGTGAAGATCTGCGTGTAAAGCTGATACGTTCTGGAGACCGTTTGTAGGCAGATGGA
GGAGCATCCGAAAGATGATCATCGATTTGATGCCTCTCAATATGCTTTCTTTGGTGGAGA
GGTAAGCCAAGAGGTTGAGCTTGGTGGTCTCGATGAAGAGGACGATGTTGCTCTGGGTGG
TGCTCTTGAGGAGGAGGGGGGGGTCCTTCTTGGGCTGAGTGAAAAAGATGAGGTGGAGGC
TTTAGATAATGTATCACATTTGGATGACGTTTCCGCGGACATATCTGAAATTAGTAGATC
CTACATGAACCTGGGACTTAATGAACCGGAATCAGATCATGATGCTCACAGCTGGTATGG
CAATCATCAGCGACAGTTCATGCAGGATGCGCATGGGATGCACTCGGCCAATTTTCTCTC
ACAGAGGCATTGGGCTGGGGAGTCAGAATACCCTCAGTCGCCTCAGTCGCCATTTGCGAT
GTCTGGGCCTTATCCCAAGATGCGTCCTCAAGGACCAACACCAATC
■■Homology search results ■■ -
sp_hit_id P14598
Definition sp|P14598|NCF1_HUMAN Neutrophil cytosol factor 1 OS=Homo sapiens
Align length 100
Score (bit) 40.8
E-value 0.005
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952645|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_K13, 5'
(573 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P14598|NCF1_HUMAN Neutrophil cytosol factor 1 OS=Homo sapiens... 41 0.005
sp|A8MVU1|NCF1C_HUMAN Putative neutrophil cytosol factor 1C OS=H... 41 0.005
sp|A6NI72|NCF1B_HUMAN Putative neutrophil cytosol factor 1B OS=H... 39 0.014
sp|P06472|HOR7_HORVU C-hordein (Fragment) OS=Hordeum vulgare PE=... 33 1.3
sp|O94667|RTF1_SCHPO RNA polymerase-associated protein rtf1 OS=S... 32 1.7
sp|Q8NFW9|MYRIP_HUMAN Rab effector MyRIP OS=Homo sapiens GN=MYRI... 31 5.0
sp|O14077|MU138_SCHPO Putative zinc protease mug138 OS=Schizosac... 31 5.1
sp|P50835|YPPG_BACSU Uncharacterized protein yppG OS=Bacillus su... 30 6.6
sp|Q9Y2W2|WBP11_HUMAN WW domain-binding protein 11 OS=Homo sapie... 30 6.6
sp|P79745|POU23_DANRE POU domain protein ZP-23 OS=Danio rerio GN... 30 6.6
sp|P31366|POU1_DANRE POU domain protein 1 OS=Danio rerio GN=pou1... 30 6.6
sp|Q9C0J8|WDR33_HUMAN WD repeat-containing protein 33 OS=Homo sa... 30 8.6
sp|P04723|GDA3_WHEAT Alpha/beta-gliadin A-III OS=Triticum aestiv... 30 8.6

>sp|P14598|NCF1_HUMAN Neutrophil cytosol factor 1 OS=Homo sapiens
GN=NCF1 PE=1 SV=2
Length = 390

Score = 40.8 bits (94), Expect = 0.005
Identities = 28/100 (28%), Positives = 41/100 (41%)
Frame = +1

Query: 271 KDEVEALDNVSHLDDVSADISEISRSYMNLGLNEPESDHDAHSWYGNHQRQFMQDAHGMH 450
KD+V +L D+S+ R S +AHS + +++ QDA+ +
Sbjct: 268 KDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRN 327

Query: 451 SANFLSQRHWAGESEYPQSPQSPFAMSGPYPKMRPQGPTP 570
S FL QR PQSP SP + +PQ P
Sbjct: 328 SVRFLQQRRRQARPG-PQSPGSPLEEERQTQRSKPQPAVP 366


>sp|A8MVU1|NCF1C_HUMAN Putative neutrophil cytosol factor 1C OS=Homo
sapiens GN=NCF1C PE=5 SV=1
Length = 366

Score = 40.8 bits (94), Expect = 0.005
Identities = 28/100 (28%), Positives = 41/100 (41%)
Frame = +1

Query: 271 KDEVEALDNVSHLDDVSADISEISRSYMNLGLNEPESDHDAHSWYGNHQRQFMQDAHGMH 450
KD+V +L D+S+ R S +AHS + +++ QDA+ +
Sbjct: 244 KDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRN 303

Query: 451 SANFLSQRHWAGESEYPQSPQSPFAMSGPYPKMRPQGPTP 570
S FL QR PQSP SP + +PQ P
Sbjct: 304 SVRFLQQRRRQARPG-PQSPGSPLEEERQTQRSKPQPAVP 342


>sp|A6NI72|NCF1B_HUMAN Putative neutrophil cytosol factor 1B OS=Homo
sapiens GN=NCF1B PE=5 SV=2
Length = 391

Score = 39.3 bits (90), Expect = 0.014
Identities = 27/100 (27%), Positives = 40/100 (40%)
Frame = +1

Query: 271 KDEVEALDNVSHLDDVSADISEISRSYMNLGLNEPESDHDAHSWYGNHQRQFMQDAHGMH 450
KD+V +L D+S+ R S + HS + +++ QDA+ +
Sbjct: 269 KDDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSSIRNVHSIHQRSRKRLSQDAYRRN 328

Query: 451 SANFLSQRHWAGESEYPQSPQSPFAMSGPYPKMRPQGPTP 570
S FL QR PQSP SP + +PQ P
Sbjct: 329 SVRFLQQRRRQARPG-PQSPGSPLEEERQTQRSKPQPAVP 367


>sp|P06472|HOR7_HORVU C-hordein (Fragment) OS=Hordeum vulgare PE=2
SV=1
Length = 105

Score = 32.7 bits (73), Expect = 1.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1

Query: 487 ESEYPQSPQSPFAMSGPYPKMRPQGPTPI 573
+ YP PQ PF P P+ RPQ +P+
Sbjct: 3 QQSYPVQPQQPFPQPQPVPQQRPQQASPL 31


>sp|O94667|RTF1_SCHPO RNA polymerase-associated protein rtf1
OS=Schizosaccharomyces pombe GN=rtf1 PE=1 SV=1
Length = 560

Score = 32.3 bits (72), Expect = 1.7
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1

Query: 352 MNLGLNEPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQR 474
+N+ NEP SDHD W+ Q M+D M S NF+ ++
Sbjct: 300 VNVLSNEPFSDHDFQRWH----HQMMEDKLSMPSKNFVQRK 336


>sp|Q8NFW9|MYRIP_HUMAN Rab effector MyRIP OS=Homo sapiens GN=MYRIP
PE=1 SV=2
Length = 859

Score = 30.8 bits (68), Expect = 5.0
Identities = 12/54 (22%), Positives = 30/54 (55%)
Frame = -3

Query: 169 PLHQRKHIERHQIDDHLSDAPPSAYKRSPERISFTRRSSHQHKIRKLLLAITDR 8
P Q + ++ HQ+ D LS+ S R P+ ++ T ++++ +L + ++++
Sbjct: 544 PSAQLRDLDTHQVSDDLSETDISNEARDPQTLTDTTEEKRRNRLYELAMKMSEK 597


>sp|O14077|MU138_SCHPO Putative zinc protease mug138
OS=Schizosaccharomyces pombe GN=mug138 PE=1 SV=1
Length = 969

Score = 30.8 bits (68), Expect = 5.1
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Frame = +1

Query: 271 KDEVEALDN---VSHLDDVSADISEISRSYMNLGLNEPESDH-----DAHSWYGNHQRQF 426
K +VE + N V +LDD + ++ L + +PE+D+ D H ++ R+
Sbjct: 4 KPQVEVIVNGQVVPNLDDREYRLIKLENDLEVLLVRDPETDNASAAIDVHIGSQSNPREL 63

Query: 427 MQDAHGMHSANFLSQRHWAGESEYPQSPQSPFAMSGPY 540
+ AH F+ + + E+EY + +S +S Y
Sbjct: 64 LGLAHFCEHLLFMGTKKYPDENEYRKYLESHNGISNAY 101


>sp|P50835|YPPG_BACSU Uncharacterized protein yppG OS=Bacillus
subtilis GN=yppG PE=4 SV=1
Length = 125

Score = 30.4 bits (67), Expect = 6.6
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = +1

Query: 400 WYGNHQRQFMQDAHGMHSANFLSQRHWAGESEY-PQSPQSPFAM-----SGPYPKMRPQG 561
+Y H + + Q A + L Q+H+ + Y P +P P M S PYP RP
Sbjct: 15 YYPQHMQGYYQQAAPGYLEQQLPQQHYGQQDYYQPYAPIQPMPMQPPVFSNPYPIPRPNQ 74

Query: 562 PTP 570
P
Sbjct: 75 QQP 77


>sp|Q9Y2W2|WBP11_HUMAN WW domain-binding protein 11 OS=Homo sapiens
GN=WBP11 PE=1 SV=1
Length = 641

Score = 30.4 bits (67), Expect = 6.6
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Frame = +1

Query: 325 DISEISRSYMNLGLNEPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRHWAGESEYPQ 504
+I E R ++ E D D Q+Q +++H ++ SQ+ +S P
Sbjct: 341 EIPEEGREVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPS 400

Query: 505 SPQSPFAMSG-------PYPKMRPQGP 564
Q+P M G P P +RP GP
Sbjct: 401 QIQAP-PMPGPPPLGPPPAPPLRPPGP 426


>sp|P79745|POU23_DANRE POU domain protein ZP-23 OS=Danio rerio
GN=pou23 PE=1 SV=1
Length = 443

Score = 30.4 bits (67), Expect = 6.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1

Query: 340 SRSYMNLGL---NEPESDHDAHSWYGNHQRQFMQDAHGMHSAN 459
S+S ++ GL + PE DH +H + +HQ Q Q AH H N
Sbjct: 190 SQSLVHPGLVRGDTPELDHSSHHHHHHHQHQHHQQAH--HGVN 230


tr_hit_id B6GAR6
Definition tr|B6GAR6|B6GAR6_9ACTN Putative uncharacterized protein OS=Collinsella stercoris DSM 13279
Align length 53
Score (bit) 35.8
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952645|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_K13, 5'
(573 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6GAR6|B6GAR6_9ACTN Putative uncharacterized protein OS=Colli... 36 1.7
tr|A8PGR4|A8PGR4_COPC7 Predicted protein OS=Coprinopsis cinerea ... 35 2.3
tr|A9YUA7|A9YUA7_PIG Neutrophil cytosolic factor 1 OS=Sus scrofa... 35 2.9
tr|B7GEQ0|B7GEQ0_PHATR Predicted protein OS=Phaeodactylum tricor... 35 3.8
tr|Q8I2V4|Q8I2V4_PLAF7 Putative uncharacterized protein PFI0975c... 34 5.0
tr|B4RE04|B4RE04_PHEZH Putative uncharacterized protein OS=Pheny... 34 6.5
tr|A7SAP3|A7SAP3_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 6.5
tr|B4DMD3|B4DMD3_HUMAN cDNA FLJ58174, highly similar to WW domai... 34 6.5
tr|Q2UFM5|Q2UFM5_ASPOR Predicted protein OS=Aspergillus oryzae G... 34 6.5
tr|Q08E33|Q08E33_BOVIN KIAA1737 OS=Bos taurus GN=KIAA1737 PE=2 SV=1 33 8.6
tr|B5E164|B5E164_DROPS GA24820 OS=Drosophila pseudoobscura pseud... 33 8.6
tr|B4GQ73|B4GQ73_DROPE GL15773 OS=Drosophila persimilis GN=GL157... 33 8.6
tr|B4DY34|B4DY34_HUMAN cDNA FLJ60194, highly similar to WW domai... 33 8.6
tr|B8NGS1|B8NGS1_ASPFL Putative uncharacterized protein OS=Asper... 33 8.6

>tr|B6GAR6|B6GAR6_9ACTN Putative uncharacterized protein
OS=Collinsella stercoris DSM 13279 GN=COLSTE_01166 PE=4
SV=1
Length = 489

Score = 35.8 bits (81), Expect = 1.7
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1

Query: 328 ISEISRSYMNLGLNEPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRHWAG 486
I+EI+ + LG N+P SD D Y + QF+ AH + A+ +S + G
Sbjct: 196 INEINNTIQFLGANKPASDEDFQRAYQHLHHQFLASAHAVKMAHEISDDYRVG 248


>tr|A8PGR4|A8PGR4_COPC7 Predicted protein OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_09953 PE=4
SV=1
Length = 972

Score = 35.4 bits (80), Expect = 2.3
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1

Query: 361 GLNEPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRHWAGESEYPQSPQSPFAMSGPY 540
G+ P H ++ N +R+ D HG+ + +S+R GE++ P P P
Sbjct: 220 GMMAPGGMHKGNTPISNLKRE-RPDEHGVDNIGNISKRQNTGENKMMPPPSIPMNPGQPN 278

Query: 541 PKMRPQGPTP 570
P+ P PTP
Sbjct: 279 PQNMPNQPTP 288


>tr|A9YUA7|A9YUA7_PIG Neutrophil cytosolic factor 1 OS=Sus scrofa
PE=2 SV=1
Length = 392

Score = 35.0 bits (79), Expect = 2.9
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Frame = +1

Query: 271 KDEVEALDNVSHLDDVSADISEISRSYMNLGLNEPESD-HDAHSWYGNHQRQFMQDAHGM 447
K+++ +L D++E + G S H+AHS + +++ QDA+
Sbjct: 268 KEDITGYFPSMYLQKAGQDVAEAQSKIKSRGAPPRRSSIHNAHSIHQRSRKRISQDAYRR 327

Query: 448 HSANFLSQRHWAGESEYPQSPQSPFAMSGP---YPKMRPQGP 564
+S FL QR S PQ +P P PK +P P
Sbjct: 328 NSVRFLQQRQRQPRSG-PQRAGNPLQKEQPKTERPKPQPAVP 368


>tr|B7GEQ0|B7GEQ0_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATRDRAFT_41620 PE=4 SV=1
Length = 347

Score = 34.7 bits (78), Expect = 3.8
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1

Query: 400 WYGNHQRQFMQDAHGMHSANFLSQRHWAGESEYPQSPQSPFAMSGPYPKM 549
W QR F+ +A+G+ + ++ W E + P +P + P PK+
Sbjct: 76 WIDREQRYFISNAYGLTPGSLYIRKQWRQEDQAPNAPTTQVTPEVPQPKV 125


>tr|Q8I2V4|Q8I2V4_PLAF7 Putative uncharacterized protein PFI0975c
OS=Plasmodium falciparum (isolate 3D7) GN=PFI0975c PE=4
SV=1
Length = 3381

Score = 34.3 bits (77), Expect = 5.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1

Query: 331 SEISRSYMNLGLN--EPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRH 477
SEI+ S N+G + + E H HS +G H + D HG H + +H
Sbjct: 2897 SEINNSVSNMGNDTIKREDQHGKHSQHGKHDQHGKHDQHGKHDQHGKHDQH 2947


>tr|B4RE04|B4RE04_PHEZH Putative uncharacterized protein
OS=Phenylobacterium zucineum (strain HLK1) GN=PHZ_c2026
PE=4 SV=1
Length = 315

Score = 33.9 bits (76), Expect = 6.5
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1

Query: 478 WAGESEYPQSPQSPFAMSGPYPKMRPQGPTP 570
+A S +P+ PQ+PF + GP PK PQ P P
Sbjct: 10 FARNSAWPKMPQAPFRV-GPLPKAAPQAPPP 39


>tr|A7SAP3|A7SAP3_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g111203 PE=4 SV=1
Length = 69

Score = 33.9 bits (76), Expect = 6.5
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1

Query: 373 PESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRHWAGESEYPQSPQSPFAMSGPYPKMR 552
P SD+ HS YG H A+G HSA + + P S P GP+
Sbjct: 2 PHSDYGPHSAYGPHSAYGPHSAYGPHSAYGPHSAYGPHSAYGPHSAYGPLLAYGPHSAYG 61

Query: 553 P 555
P
Sbjct: 62 P 62


>tr|B4DMD3|B4DMD3_HUMAN cDNA FLJ58174, highly similar to WW
domain-binding protein 11 OS=Homo sapiens PE=2 SV=1
Length = 589

Score = 33.9 bits (76), Expect = 6.5
Identities = 24/82 (29%), Positives = 36/82 (43%)
Frame = +1

Query: 325 DISEISRSYMNLGLNEPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRHWAGESEYPQ 504
+I E R ++ E D D Q+Q +++H ++ SQ+ +S P
Sbjct: 341 EIPEEGREVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPS 400

Query: 505 SPQSPFAMSGPYPKMRPQGPTP 570
Q+P M GP P RP GP P
Sbjct: 401 QIQAP-PMPGP-PPGRPPGPPP 420


>tr|Q2UFM5|Q2UFM5_ASPOR Predicted protein OS=Aspergillus oryzae
GN=AO090026000147 PE=4 SV=1
Length = 238

Score = 33.9 bits (76), Expect = 6.5
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1

Query: 496 YPQS-PQSPFAMSGPYPKMRPQGPTP 570
YPQ PQ P+ +GPY + PQGP P
Sbjct: 128 YPQQFPQQPYPQTGPYQQYPPQGPYP 153


>tr|Q08E33|Q08E33_BOVIN KIAA1737 OS=Bos taurus GN=KIAA1737 PE=2 SV=1
Length = 398

Score = 33.5 bits (75), Expect = 8.6
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +1

Query: 331 SEISRSYMNLGLNEPESDHDAHSWYGNHQRQFMQDAHGMHSANFLSQRHWAGESEYPQSP 510
SE+ ++ LGL ESD D S + + + + A M S + LS W+ E + P+
Sbjct: 22 SEMKKAARQLGLAAAESDKD--SGFSDGSSECLSSAEQMESEDMLSALGWSREDK-PRPS 78

Query: 511 QSPFAMSGPYPKMRP 555
P SG +P + P
Sbjct: 79 SKP--ASGAFPTLSP 91