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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952651
Clone id TST38A01NGRL0014_K19
Library
Length 639
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_K19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CCGTCCTCCTCTTCCGTCTTCTACACAGCAATCAAGTATGGGTGATATCAAGGATGGTGA
CACCTACCAAGAGGAGCTTCTCGACTATGAAGAAGAAGAGGAAGCTGCCCCCGATGCAGT
TGCAACCAAAGCAGATGGTGGTAAAAAAGGCTATGTGGGAATCCACAGCTCTGGTTTTCG
TGATTTCCTTCTCAAGCCAGAGCTTTTGCGAGCTATTGTAGATTCTGGATTTGAGCACCC
CTCCGAGGTGCAACATGAGTGCATCCCTCAAGCAATTCTGGGCATGGACGTGATTTGCCA
GGCAAAGTCTGGTATGGGCAAAACAGCTGTTTTTGTTCTTTCTACTCTGCAGCAGATCGA
GCCTGTCAGTGGGCAAGTGGCTGCCCTTGTTCTTTGTCATACCCGAGAACTAGCGTATCA
GATCTGCCATGAGTTTGAAAGGTTTAGCACATACCTTCCCGACATCAAAGTATCTGTATT
TTATGGAGGGGTCAACATAAGAACGCACAAAGATCTCTTGAAGAATGACAGTCCTCATGT
TGTTGTTGGAACTCCTGGAAGGGTGCTGGCTTTGGCTAGAGATAAGGATTTGAATTTGAA
GAGTGTCAGGCATTTTATTCTTGATGAATGCGATAAAAT
■■Homology search results ■■ -
sp_hit_id Q9LFN6
Definition sp|Q9LFN6|RH56_ARATH DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana
Align length 202
Score (bit) 319.0
E-value 9.0e-87
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952651|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_K19, 5'
         (639 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LFN6|RH56_ARATH DEAD-box ATP-dependent RNA helicase 56 OS=A...   319   9e-87
sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15 OS=A...   319   9e-87
sp|Q0JM17|RH56_ORYSJ DEAD-box ATP-dependent RNA helicase 56 OS=O...   311   2e-84
sp|Q5JK84|RH15_ORYSJ DEAD-box ATP-dependent RNA helicase 15 OS=O...   311   2e-84
sp|Q63413|UAP56_RAT Spliceosome RNA helicase Bat1 OS=Rattus norv...   272   1e-72
sp|Q9Z1N5|UAP56_MOUSE Spliceosome RNA helicase Bat1 OS=Mus muscu...   272   1e-72
sp|Q5RE47|UAP56_PONAB Spliceosome RNA helicase BAT1 OS=Pongo abe...   271   2e-72
sp|Q29024|UAP56_PIG Spliceosome RNA helicase BAT1 OS=Sus scrofa ...   271   2e-72
sp|P60024|UAP56_PANTR Spliceosome RNA helicase BAT1 OS=Pan trogl...   271   2e-72
sp|Q5TM17|UAP56_MACMU Spliceosome RNA helicase BAT1 OS=Macaca mu...   271   2e-72
sp|Q13838|UAP56_HUMAN Spliceosome RNA helicase BAT1 OS=Homo sapi...   271   2e-72
sp|Q5WR10|UAP56_CANFA Spliceosome RNA helicase BAT1 OS=Canis fam...   271   2e-72
sp|Q8VDW0|DDX39_MOUSE ATP-dependent RNA helicase DDX39 OS=Mus mu...   271   2e-72
sp|Q3T147|UAP56_BOVIN Spliceosome RNA helicase BAT1 OS=Bos tauru...   271   2e-72
sp|Q5U216|DDX39_RAT ATP-dependent RNA helicase DDX39 OS=Rattus n...   271   2e-72
sp|Q5ZHZ0|UAP56_CHICK Spliceosome RNA helicase BAT1 OS=Gallus ga...   270   6e-72
sp|O00148|DDX39_HUMAN ATP-dependent RNA helicase DDX39 OS=Homo s...   268   2e-71
sp|Q5KNA3|SUB2_CRYNE ATP-dependent RNA helicase SUB2 OS=Cryptoco...   251   2e-66
sp|O13792|SUB2_SCHPO ATP-dependent RNA helicase uap56 OS=Schizos...   250   4e-66
sp|Q18212|UAP56_CAEEL Spliceosome RNA helicase BAT1 homolog OS=C...   250   5e-66
sp|Q27268|UAP56_DROME ATP-dependent RNA helicase WM6 OS=Drosophi...   249   8e-66
sp|Q2H4D0|SUB2_CHAGB ATP-dependent RNA helicase SUB2 OS=Chaetomi...   245   1e-64
sp|A4RBS3|SUB2_MAGGR ATP-dependent RNA helicase SUB2 OS=Magnapor...   241   2e-63
sp|Q6CH90|SUB2_YARLI ATP-dependent RNA helicase SUB2 OS=Yarrowia...   239   1e-62
sp|A5DDN0|SUB2_PICGU ATP-dependent RNA helicase SUB2 OS=Pichia g...   236   1e-61
sp|A7EIX7|SUB2_SCLS1 ATP-dependent RNA helicase sub2 OS=Scleroti...   235   2e-61
sp|A5E3W5|SUB2_LODEL ATP-dependent RNA helicase SUB2 OS=Lodderom...   234   3e-61
sp|A3LST5|SUB2_PICST ATP-dependent RNA helicase SUB2 OS=Pichia s...   233   6e-61
sp|Q6BME5|SUB2_DEBHA ATP-dependent RNA helicase SUB2 OS=Debaryom...   233   6e-61
sp|Q759L6|SUB2_ASHGO ATP-dependent RNA helicase SUB2 OS=Ashbya g...   232   1e-60

>sp|Q9LFN6|RH56_ARATH DEAD-box ATP-dependent RNA helicase 56
           OS=Arabidopsis thaliana GN=RH56 PE=2 SV=2
          Length = 427

 Score =  319 bits (817), Expect = 9e-87
 Identities = 160/202 (79%), Positives = 173/202 (85%), Gaps = 2/202 (0%)
 Frame = +2

Query: 38  MGDIKDGDTYQXXXXXXXXXXXAAPDAVATKADGG--KKGYVGIHSSGFRDFLLKPELLR 211
           MGD +D + Y+             PD+   K +G   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 59

Query: 212 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALV 391
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP  GQV+ALV
Sbjct: 60  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 119

Query: 392 LCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLA 571
           LCHTRELAYQIC+EF RFSTYLPD KVSVFYGGVNI+ HKDLLKN+ PH+VVGTPGRVLA
Sbjct: 120 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 179

Query: 572 LARDKDLNLKSVRHFILDECDK 637
           LAR+KDL+LK+VRHFILDECDK
Sbjct: 180 LAREKDLSLKNVRHFILDECDK 201


>sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15
           OS=Arabidopsis thaliana GN=RH15 PE=2 SV=2
          Length = 427

 Score =  319 bits (817), Expect = 9e-87
 Identities = 160/202 (79%), Positives = 173/202 (85%), Gaps = 2/202 (0%)
 Frame = +2

Query: 38  MGDIKDGDTYQXXXXXXXXXXXAAPDAVATKADGG--KKGYVGIHSSGFRDFLLKPELLR 211
           MGD +D + Y+             PD+   K +G   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 59

Query: 212 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALV 391
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP  GQV+ALV
Sbjct: 60  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 119

Query: 392 LCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLA 571
           LCHTRELAYQIC+EF RFSTYLPD KVSVFYGGVNI+ HKDLLKN+ PH+VVGTPGRVLA
Sbjct: 120 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 179

Query: 572 LARDKDLNLKSVRHFILDECDK 637
           LAR+KDL+LK+VRHFILDECDK
Sbjct: 180 LAREKDLSLKNVRHFILDECDK 201


>sp|Q0JM17|RH56_ORYSJ DEAD-box ATP-dependent RNA helicase 56
           OS=Oryza sativa subsp. japonica GN=Os01g0549700 PE=2
           SV=2
          Length = 432

 Score =  311 bits (797), Expect = 2e-84
 Identities = 153/202 (75%), Positives = 170/202 (84%), Gaps = 4/202 (1%)
 Frame = +2

Query: 44  DIKDGDTYQXXXXXXXXXXXAAPD----AVATKADGGKKGYVGIHSSGFRDFLLKPELLR 211
           ++KD + Y+              D    A    AD  KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGTDGGANAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 212 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALV 391
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+PV+GQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 392 LCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLA 571
           LCHTRELAYQICHEFERFS YLP++KV+VFYGGV+I+ HKDLLKND PH+VVGTPGR+LA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 572 LARDKDLNLKSVRHFILDECDK 637
           LAR+KDL+LK+VRHFILDECDK
Sbjct: 185 LAREKDLSLKNVRHFILDECDK 206


>sp|Q5JK84|RH15_ORYSJ DEAD-box ATP-dependent RNA helicase 15
           OS=Oryza sativa subsp. japonica GN=Os01g0550000 PE=2
           SV=1
          Length = 432

 Score =  311 bits (797), Expect = 2e-84
 Identities = 153/202 (75%), Positives = 170/202 (84%), Gaps = 4/202 (1%)
 Frame = +2

Query: 44  DIKDGDTYQXXXXXXXXXXXAAPD----AVATKADGGKKGYVGIHSSGFRDFLLKPELLR 211
           ++KD + Y+              D    A    AD  KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGADGGAAAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 212 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALV 391
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+PV+GQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 392 LCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLA 571
           LCHTRELAYQICHEFERFS YLP++KV+VFYGGV+I+ HKDLLKND PH+VVGTPGR+LA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 572 LARDKDLNLKSVRHFILDECDK 637
           LAR+KDL+LK+VRHFILDECDK
Sbjct: 185 LAREKDLSLKNVRHFILDECDK 206


>sp|Q63413|UAP56_RAT Spliceosome RNA helicase Bat1 OS=Rattus
           norvegicus GN=Bat1 PE=2 SV=3
          Length = 428

 Score =  272 bits (695), Expect = 1e-72
 Identities = 130/179 (72%), Positives = 155/179 (86%), Gaps = 1/179 (0%)
 Frame = +2

Query: 104 AAPDAVATKADGGKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 280
           A  D     A    KG YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL
Sbjct: 22  AGADGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAIL 81

Query: 281 GMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALVLCHTRELAYQICHEFERFSTYLP 460
           GMDV+CQAKSGMGKTAVFVL+TLQQ+EPV+GQV+ LV+CHTRELA+QI  E+ERFS Y+P
Sbjct: 82  GMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMP 141

Query: 461 DIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLALARDKDLNLKSVRHFILDECDK 637
           ++KV+VF+GG++I+  +++LK + PH+VVGTPGR+LALAR+K LNLK ++HFILDECDK
Sbjct: 142 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDK 200


>sp|Q9Z1N5|UAP56_MOUSE Spliceosome RNA helicase Bat1 OS=Mus musculus
           GN=Bat1 PE=1 SV=1
          Length = 428

 Score =  272 bits (695), Expect = 1e-72
 Identities = 130/179 (72%), Positives = 155/179 (86%), Gaps = 1/179 (0%)
 Frame = +2

Query: 104 AAPDAVATKADGGKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAIL 280
           A  D     A    KG YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAIL
Sbjct: 22  AGADGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAIL 81

Query: 281 GMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALVLCHTRELAYQICHEFERFSTYLP 460
           GMDV+CQAKSGMGKTAVFVL+TLQQ+EPV+GQV+ LV+CHTRELA+QI  E+ERFS Y+P
Sbjct: 82  GMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMP 141

Query: 461 DIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLALARDKDLNLKSVRHFILDECDK 637
           ++KV+VF+GG++I+  +++LK + PH+VVGTPGR+LALAR+K LNLK ++HFILDECDK
Sbjct: 142 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDK 200


>sp|Q5RE47|UAP56_PONAB Spliceosome RNA helicase BAT1 OS=Pongo abelii
           GN=BAT1 PE=2 SV=1
          Length = 428

 Score =  271 bits (694), Expect = 2e-72
 Identities = 126/165 (76%), Positives = 151/165 (91%)
 Frame = +2

Query: 143 KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 322
           K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGK
Sbjct: 36  KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 95

Query: 323 TAVFVLSTLQQIEPVSGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIR 502
           TAVFVL+TLQQ+EPV+GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KV+VF+GG++I+
Sbjct: 96  TAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIK 155

Query: 503 THKDLLKNDSPHVVVGTPGRVLALARDKDLNLKSVRHFILDECDK 637
             +++LK + PH+VVGTPGR+LALAR+K LNLK ++HFILDECDK
Sbjct: 156 KDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDK 200


>sp|Q29024|UAP56_PIG Spliceosome RNA helicase BAT1 OS=Sus scrofa
           GN=BAT1 PE=3 SV=2
          Length = 428

 Score =  271 bits (694), Expect = 2e-72
 Identities = 126/165 (76%), Positives = 151/165 (91%)
 Frame = +2

Query: 143 KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 322
           K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGK
Sbjct: 36  KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 95

Query: 323 TAVFVLSTLQQIEPVSGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIR 502
           TAVFVL+TLQQ+EPV+GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KV+VF+GG++I+
Sbjct: 96  TAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIK 155

Query: 503 THKDLLKNDSPHVVVGTPGRVLALARDKDLNLKSVRHFILDECDK 637
             +++LK + PH+VVGTPGR+LALAR+K LNLK ++HFILDECDK
Sbjct: 156 KDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDK 200


>sp|P60024|UAP56_PANTR Spliceosome RNA helicase BAT1 OS=Pan
           troglodytes GN=BAT1 PE=3 SV=1
          Length = 428

 Score =  271 bits (694), Expect = 2e-72
 Identities = 126/165 (76%), Positives = 151/165 (91%)
 Frame = +2

Query: 143 KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 322
           K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGK
Sbjct: 36  KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 95

Query: 323 TAVFVLSTLQQIEPVSGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIR 502
           TAVFVL+TLQQ+EPV+GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KV+VF+GG++I+
Sbjct: 96  TAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIK 155

Query: 503 THKDLLKNDSPHVVVGTPGRVLALARDKDLNLKSVRHFILDECDK 637
             +++LK + PH+VVGTPGR+LALAR+K LNLK ++HFILDECDK
Sbjct: 156 KDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDK 200


>sp|Q5TM17|UAP56_MACMU Spliceosome RNA helicase BAT1 OS=Macaca
           mulatta GN=BAT1 PE=3 SV=1
          Length = 428

 Score =  271 bits (694), Expect = 2e-72
 Identities = 126/165 (76%), Positives = 151/165 (91%)
 Frame = +2

Query: 143 KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGK 322
           K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGK
Sbjct: 36  KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 95

Query: 323 TAVFVLSTLQQIEPVSGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIR 502
           TAVFVL+TLQQ+EPV+GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KV+VF+GG++I+
Sbjct: 96  TAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIK 155

Query: 503 THKDLLKNDSPHVVVGTPGRVLALARDKDLNLKSVRHFILDECDK 637
             +++LK + PH+VVGTPGR+LALAR+K LNLK ++HFILDECDK
Sbjct: 156 KDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDK 200
tr_hit_id A9P9M6
Definition tr|A9P9M6|A9P9M6_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 202
Score (bit) 337.0
E-value 4.0e-91
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952651|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_K19, 5'
         (639 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9P9M6|A9P9M6_POPTR Putative uncharacterized protein OS=Popul...   337   4e-91
tr|A9TT23|A9TT23_PHYPA Predicted protein OS=Physcomitrella paten...   333   4e-90
tr|A9SV98|A9SV98_PHYPA Predicted protein OS=Physcomitrella paten...   333   4e-90
tr|A7QIQ3|A7QIQ3_VITVI Chromosome chr9 scaffold_104, whole genom...   325   1e-87
tr|A5AZI2|A5AZI2_VITVI Putative uncharacterized protein OS=Vitis...   325   1e-87
tr|B7FKB4|B7FKB4_MEDTR Putative uncharacterized protein (Fragmen...   325   1e-87
tr|B6TE13|B6TE13_MAIZE Spliceosome RNA helicase BAT1 OS=Zea mays...   316   7e-85
tr|B8AA10|B8AA10_ORYSI Putative uncharacterized protein OS=Oryza...   311   2e-83
tr|B7F820|B7F820_ORYSJ cDNA clone:J033114G10, full insert sequen...   311   2e-83
tr|B7EDH0|B7EDH0_ORYSJ cDNA clone:J013107H03, full insert sequen...   311   2e-83
tr|Q7SXU7|Q7SXU7_DANRE HLA-B associated transcript 1 OS=Danio re...   275   2e-72
tr|Q803W0|Q803W0_DANRE DEAD (Asp-Glu-Ala-Asp) box polypeptide 39...   272   1e-71
tr|Q3TB18|Q3TB18_MOUSE Putative uncharacterized protein OS=Mus m...   272   1e-71
tr|B5XE76|B5XE76_SALSA ATP-dependent RNA helicase DDX39 OS=Salmo...   271   2e-71
tr|B5DFY0|B5DFY0_SALSA DEAD (Asp-Glu-Ala-Asp) box polypeptide 39...   271   2e-71
tr|Q3UVN0|Q3UVN0_MOUSE Putative uncharacterized protein OS=Mus m...   271   2e-71
tr|Q3U837|Q3U837_MOUSE Putative uncharacterized protein OS=Mus m...   271   2e-71
tr|A7X5V6|A7X5V6_ORNAN Bat1 OS=Ornithorhynchus anatinus GN=Bat1 ...   271   2e-71
tr|Q5STU9|Q5STU9_HUMAN HLA-B associated transcript 1 (Fragment) ...   271   2e-71
tr|Q5STU3|Q5STU3_HUMAN HLA-B associated transcript 1 OS=Homo sap...   271   2e-71
tr|Q5STA2|Q5STA2_HUMAN HLA-B associated transcript 1 (Fragment) ...   271   2e-71
tr|Q5STA0|Q5STA0_HUMAN HLA-B associated transcript 1 (Fragment) ...   271   2e-71
tr|Q5RJ65|Q5RJ65_HUMAN HLA-B associated transcript 1 (Fragment) ...   271   2e-71
tr|Q59G92|Q59G92_HUMAN HLA-B associated transcript 1 variant (Fr...   271   2e-71
tr|B0UZA2|B0UZA2_HUMAN HLA-B associated transcript 1 (Fragment) ...   271   2e-71
tr|B0UZA1|B0UZA1_HUMAN HLA-B associated transcript 1 (Fragment) ...   271   2e-71
tr|B0UZA0|B0UZA0_HUMAN HLA-B associated transcript 1 (Fragment) ...   271   2e-71
tr|B0UZ99|B0UZ99_HUMAN HLA-B associated transcript 1 (Fragment) ...   271   2e-71
tr|B0UZ21|B0UZ21_HUMAN HLA-B associated transcript 1 (Fragment) ...   271   2e-71
tr|B0UZ20|B0UZ20_HUMAN HLA-B associated transcript 1 (Fragment) ...   271   2e-71

>tr|A9P9M6|A9P9M6_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 428

 Score =  337 bits (864), Expect = 4e-91
 Identities = 165/202 (81%), Positives = 178/202 (88%), Gaps = 2/202 (0%)
 Frame = +2

Query: 38  MGDIKDGDTYQXXXXXXXXXXXAAPDAVATKADGG--KKGYVGIHSSGFRDFLLKPELLR 211
           MG+ +D DTY+            APD+V  K +G   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDTYEEELLDYEEEDEKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 212 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALV 391
           +IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP SGQV ALV
Sbjct: 61  SIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALV 120

Query: 392 LCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLA 571
           LCHTRELAYQICHEFERFSTYLPD KV+VFYGGVNI+THKDLLKN+ PH+VVGTPGR+LA
Sbjct: 121 LCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRILA 180

Query: 572 LARDKDLNLKSVRHFILDECDK 637
           LARDKDL+LK+VRHFILDECDK
Sbjct: 181 LARDKDLSLKNVRHFILDECDK 202


>tr|A9TT23|A9TT23_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_96766 PE=4 SV=1
          Length = 432

 Score =  333 bits (855), Expect = 4e-90
 Identities = 164/180 (91%), Positives = 172/180 (95%), Gaps = 2/180 (1%)
 Frame = +2

Query: 104 AAPDAVATKADGG--KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 277
           AAPDAVA K +G   KKGYVGIHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 20  AAPDAVAAKTNGETVKKGYVGIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 79

Query: 278 LGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALVLCHTRELAYQICHEFERFSTYL 457
           LGMDVICQAKSGMGKTAVFVLSTLQQIEPV+GQVAALVLCHTRELAYQICHEFERFSTYL
Sbjct: 80  LGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALVLCHTRELAYQICHEFERFSTYL 139

Query: 458 PDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLALARDKDLNLKSVRHFILDECDK 637
           PDIKV+VFYGGVNI+THKDLLKN+ PH+VVGTPGR+L LARDKDL+LKSVRHFILDECDK
Sbjct: 140 PDIKVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRILGLARDKDLSLKSVRHFILDECDK 199


>tr|A9SV98|A9SV98_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_188774 PE=4 SV=1
          Length = 425

 Score =  333 bits (855), Expect = 4e-90
 Identities = 164/180 (91%), Positives = 172/180 (95%), Gaps = 2/180 (1%)
 Frame = +2

Query: 104 AAPDAVATKADGG--KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 277
           AAPDAVA K +G   KKGYVGIHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAI
Sbjct: 20  AAPDAVAAKTNGETVKKGYVGIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 79

Query: 278 LGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALVLCHTRELAYQICHEFERFSTYL 457
           LGMDVICQAKSGMGKTAVFVLSTLQQIEPV+GQVAALVLCHTRELAYQICHEFERFSTYL
Sbjct: 80  LGMDVICQAKSGMGKTAVFVLSTLQQIEPVTGQVAALVLCHTRELAYQICHEFERFSTYL 139

Query: 458 PDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLALARDKDLNLKSVRHFILDECDK 637
           PDIKV+VFYGGVNI+THKDLLKN+ PH+VVGTPGR+L LARDKDL+LKSVRHFILDECDK
Sbjct: 140 PDIKVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRILGLARDKDLSLKSVRHFILDECDK 199


>tr|A7QIQ3|A7QIQ3_VITVI Chromosome chr9 scaffold_104, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000354001
           PE=4 SV=1
          Length = 434

 Score =  325 bits (834), Expect = 1e-87
 Identities = 163/202 (80%), Positives = 177/202 (87%), Gaps = 2/202 (0%)
 Frame = +2

Query: 38  MGDIKDGDTYQXXXXXXXXXXXAAPDAVATKADG--GKKGYVGIHSSGFRDFLLKPELLR 211
           MG+ +D D Y+            APD+VA+KA G   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGEARDNDAYEEELLDYEEEDEKAPDSVASKAAGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 212 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALV 391
           +IVDSGFEHPSE   +CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPV+GQVAALV
Sbjct: 61  SIVDSGFEHPSE--GKCIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 118

Query: 392 LCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLA 571
           LCHTRELAYQICHEFERFSTYLPDIKV+VFYGGV+I+THKDLLKN+ PH+VVGTPGR+LA
Sbjct: 119 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVSIKTHKDLLKNECPHIVVGTPGRILA 178

Query: 572 LARDKDLNLKSVRHFILDECDK 637
           LARDKDL LK VRHFILDECDK
Sbjct: 179 LARDKDLGLKHVRHFILDECDK 200


>tr|A5AZI2|A5AZI2_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_030204 PE=4 SV=1
          Length = 383

 Score =  325 bits (834), Expect = 1e-87
 Identities = 163/202 (80%), Positives = 177/202 (87%), Gaps = 2/202 (0%)
 Frame = +2

Query: 38  MGDIKDGDTYQXXXXXXXXXXXAAPDAVATKADG--GKKGYVGIHSSGFRDFLLKPELLR 211
           MG+ +D D Y+            APD+VA+KA G   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGEARDNDAYEEELLDYEEEDEKAPDSVASKAAGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 212 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALV 391
           +IVDSGFEHPSE   +CIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPV+GQVAALV
Sbjct: 61  SIVDSGFEHPSE--GKCIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 118

Query: 392 LCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLA 571
           LCHTRELAYQICHEFERFSTYLPDIKV+VFYGGV+I+THKDLLKN+ PH+VVGTPGR+LA
Sbjct: 119 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVSIKTHKDLLKNECPHIVVGTPGRILA 178

Query: 572 LARDKDLNLKSVRHFILDECDK 637
           LARDKDL LK VRHFILDECDK
Sbjct: 179 LARDKDLGLKHVRHFILDECDK 200


>tr|B7FKB4|B7FKB4_MEDTR Putative uncharacterized protein (Fragment)
           OS=Medicago truncatula PE=2 SV=1
          Length = 278

 Score =  325 bits (833), Expect = 1e-87
 Identities = 158/200 (79%), Positives = 172/200 (86%)
 Frame = +2

Query: 38  MGDIKDGDTYQXXXXXXXXXXXAAPDAVATKADGGKKGYVGIHSSGFRDFLLKPELLRAI 217
           MG++KD + Y+            A D+     +  KKGYVGIHSSGFRDFLLKPELLRAI
Sbjct: 1   MGELKDTEVYEEELIDYEEEDEKALDSTKPTTESVKKGYVGIHSSGFRDFLLKPELLRAI 60

Query: 218 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALVLC 397
           VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+PV GQVAALVLC
Sbjct: 61  VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVAALVLC 120

Query: 398 HTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLALA 577
           HTRELAYQICHE ERFSTYLPDIKV+VFYGGVNI+ HKDLLKN+ PH+VVGTPGR+LAL 
Sbjct: 121 HTRELAYQICHEVERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALT 180

Query: 578 RDKDLNLKSVRHFILDECDK 637
           RD+DL LK+VRHFILDECDK
Sbjct: 181 RDRDLGLKNVRHFILDECDK 200


>tr|B6TE13|B6TE13_MAIZE Spliceosome RNA helicase BAT1 OS=Zea mays
           PE=2 SV=1
          Length = 399

 Score =  316 bits (810), Expect = 7e-85
 Identities = 156/202 (77%), Positives = 171/202 (84%), Gaps = 2/202 (0%)
 Frame = +2

Query: 38  MGDIKDGDTYQXXXXXXXXXXXAAPDAVATKADG--GKKGYVGIHSSGFRDFLLKPELLR 211
           MG+ K+ D Y+              D  A K  G   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGEAKENDVYEEELLDYEEDDDKTVDGSAAKPTGEVAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 212 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALV 391
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+PV+GQVAALV
Sbjct: 61  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVAALV 120

Query: 392 LCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLA 571
           LCHTRELAYQICHEFERFS YL ++KV+VFYGGV+IR HKDLLKN+ PH+VVGTPGR+LA
Sbjct: 121 LCHTRELAYQICHEFERFSKYLTEVKVAVFYGGVHIRKHKDLLKNECPHIVVGTPGRILA 180

Query: 572 LARDKDLNLKSVRHFILDECDK 637
           LARDKDL+LK+VRHFILDECDK
Sbjct: 181 LARDKDLSLKNVRHFILDECDK 202


>tr|B8AA10|B8AA10_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_02373 PE=4 SV=1
          Length = 432

 Score =  311 bits (797), Expect = 2e-83
 Identities = 153/202 (75%), Positives = 170/202 (84%), Gaps = 4/202 (1%)
 Frame = +2

Query: 44  DIKDGDTYQXXXXXXXXXXXAAPD----AVATKADGGKKGYVGIHSSGFRDFLLKPELLR 211
           ++KD + Y+              D    A    AD  KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGADGGAAAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 212 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALV 391
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+PV+GQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 392 LCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLA 571
           LCHTRELAYQICHEFERFS YLP++KV+VFYGGV+I+ HKDLLKND PH+VVGTPGR+LA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 572 LARDKDLNLKSVRHFILDECDK 637
           LAR+KDL+LK+VRHFILDECDK
Sbjct: 185 LAREKDLSLKNVRHFILDECDK 206


>tr|B7F820|B7F820_ORYSJ cDNA clone:J033114G10, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 432

 Score =  311 bits (797), Expect = 2e-83
 Identities = 153/202 (75%), Positives = 170/202 (84%), Gaps = 4/202 (1%)
 Frame = +2

Query: 44  DIKDGDTYQXXXXXXXXXXXAAPD----AVATKADGGKKGYVGIHSSGFRDFLLKPELLR 211
           ++KD + Y+              D    A    AD  KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGADGGAAAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 212 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALV 391
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+PV+GQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 392 LCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLA 571
           LCHTRELAYQICHEFERFS YLP++KV+VFYGGV+I+ HKDLLKND PH+VVGTPGR+LA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 572 LARDKDLNLKSVRHFILDECDK 637
           LAR+KDL+LK+VRHFILDECDK
Sbjct: 185 LAREKDLSLKNVRHFILDECDK 206


>tr|B7EDH0|B7EDH0_ORYSJ cDNA clone:J013107H03, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 432

 Score =  311 bits (797), Expect = 2e-83
 Identities = 153/202 (75%), Positives = 170/202 (84%), Gaps = 4/202 (1%)
 Frame = +2

Query: 44  DIKDGDTYQXXXXXXXXXXXAAPD----AVATKADGGKKGYVGIHSSGFRDFLLKPELLR 211
           ++KD + Y+              D    A    AD  KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGTDGGANAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 212 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVSGQVAALV 391
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQI+PV+GQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 392 LCHTRELAYQICHEFERFSTYLPDIKVSVFYGGVNIRTHKDLLKNDSPHVVVGTPGRVLA 571
           LCHTRELAYQICHEFERFS YLP++KV+VFYGGV+I+ HKDLLKND PH+VVGTPGR+LA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 572 LARDKDLNLKSVRHFILDECDK 637
           LAR+KDL+LK+VRHFILDECDK
Sbjct: 185 LAREKDLSLKNVRHFILDECDK 206