DK952661 |
Clone id |
TST38A01NGRL0014_L07 |
Library |
TST38 |
Length |
592 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_L07. 5' end sequence. |
Accession |
DK952661 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL439Contig1 |
Sequence |
GGCTGAAGAGATTGTGAACAAGACACCCAATGCATACATGCTTCAGCAGTTTGAAAACCC GGCAAATCCAAAGGTTCATTTTGAAACCACTGGTCCTGAAATATGGGAAGACACGGCTGG CAAGATTGATATCCTAATTTCTGGTATTGGAACCGGTGGGACAGTTACTGGTGCTGGACG TTTTTTGAAAGGGAAAAATCCAAATATAAAGATCATTGGTATAGAGCCAACAGAAAGCAG TGTCTTGGCTGGAGGAAAACCAGGTCCCCACAAGATTCAAGGAATCGGTGCAGGTTTTAT CCCTGGGATTTTGGATGTTGACATTCTTGATGAGGTCTTGCAGGTCTCTAGCAATGAAGC AATTGAAATGGCCAAACAACTTGCTTTGAAGGAGGGCCTTTTGGTTGGCATCTCTTCAGG AGCAGCCGCAGTTGCTGCTATTCAGGTTGCCAAGCGGCCTGAAAATGCTGGCAAGCTTAT TGTGGTTGTTTTCCCCAGTTTTGGTGAGAGATACTTGTCGACAGTACTTTTCCAGTCTGT TAGGGAGGCAGCGGAGAAGATGCAGCCCGAAGCCTGATGTCAGCCTGCTAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O81155 |
Definition |
sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum |
Align length |
190 |
Score (bit) |
242.0 |
E-value |
9.0e-64 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952661|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_L07, 5' (592 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromopla... 242 9e-64 sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromopla... 240 3e-63 sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromopla... 239 1e-62 sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabid... 238 2e-62 sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1... 236 8e-62 sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2 236 8e-62 sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 233 5e-61 sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=C... 230 4e-60 sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=2... 229 6e-60 sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2... 228 2e-59 sp|P47998|CYSK1_ARATH Cysteine synthase OS=Arabidopsis thaliana ... 227 3e-59 sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 225 1e-58 sp|O23733|CYSK1_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 225 1e-58 sp|O23735|CYSK2_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 220 5e-57 sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromopla... 219 8e-57 sp|P73410|CYSK_SYNY3 Cysteine synthase OS=Synechocystis sp. (str... 177 5e-44 sp|O22682|CYSK4_ARATH Probable cysteine synthase, chloroplastic ... 172 1e-42 sp|O32978|CYSK_MYCLE Cysteine synthase A OS=Mycobacterium leprae... 166 8e-41 sp|P0A534|CYSK_MYCTU Cysteine synthase A OS=Mycobacterium tuberc... 166 1e-40 sp|P0A535|CYSK_MYCBO Cysteine synthase A OS=Mycobacterium bovis ... 166 1e-40 sp|P45040|CYSK_HAEIN Cysteine synthase OS=Haemophilus influenzae... 151 2e-36 sp|Q59966|SRPG_SYNE7 Cysteine synthase, plasmid OS=Synechococcus... 151 3e-36 sp|Q7DDL5|CYSK_NEIMB Cysteine synthase OS=Neisseria meningitidis... 150 4e-36 sp|P0A1E3|CYSK_SALTY Cysteine synthase A OS=Salmonella typhimuri... 146 9e-35 sp|P0A1E4|CYSK_SALTI Cysteine synthase A OS=Salmonella typhi GN=... 146 9e-35 sp|P57171|CYSK_BUCAI Cysteine synthase OS=Buchnera aphidicola su... 144 4e-34 sp|P0ABK5|CYSK_ECOLI Cysteine synthase A OS=Escherichia coli (st... 143 7e-34 sp|P0ABK6|CYSK_ECO57 Cysteine synthase A OS=Escherichia coli O15... 143 7e-34 sp|Q8KA48|CYSK_BUCAP Cysteine synthase OS=Buchnera aphidicola su... 137 5e-32 sp|P37887|CYSK_BACSU Serine-dependent cysteine synthase OS=Bacil... 127 3e-29
>sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1 Length = 386
Score = 242 bits (618), Expect = 9e-64 Identities = 119/190 (62%), Positives = 143/190 (75%) Frame = +2
Query: 2 AEEIVNKTPNAYMLQQFENPANPKVHFETTGPEIWEDTAGKIDILISXXXXXXXXXXXXR 181 AEEI+N TP+AY+LQQF+NPANPK+H+ETTGPEIWEDT GKIDIL++ R Sbjct: 196 AEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAGIGTGGTITGTGR 255
Query: 182 FLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQGIGAGFIPGILDVDILDEVLQVSSNEA 361 FL EPTES+VL+GGKPGPHKIQGIGAGFIPG LD D++DEV+++SS+EA Sbjct: 256 FLKEQNPNIKIIGVEPTESNVLSGGKPGPHKIQGIGAGFIPGNLDQDVMDEVIEISSDEA 315
Query: 362 IEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPENAGKLIVVVFPSFGERYLSTVLFQSV 541 +E A+ LAL+EGLL QV KRPENAGKLI VVFPS+GERYLS++LFQS+ Sbjct: 316 VETARTLALQEGLLVGISSGAAALAAIQVGKRPENAGKLIGVVFPSYGERYLSSILFQSI 375
Query: 542 REAAEKMQPE 571 RE EKM+PE Sbjct: 376 REECEKMKPE 385
>sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2 Length = 392
Score = 240 bits (613), Expect = 3e-63 Identities = 120/190 (63%), Positives = 140/190 (73%) Frame = +2
Query: 2 AEEIVNKTPNAYMLQQFENPANPKVHFETTGPEIWEDTAGKIDILISXXXXXXXXXXXXR 181 AEEI+ KTPN+YMLQQF+NPANPK+H+ETTGPEIWEDT GKIDIL++ R Sbjct: 202 AEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAGIGTGGTITGVGR 261
Query: 182 FLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQGIGAGFIPGILDVDILDEVLQVSSNEA 361 F+ EPTES++L+GGKPGPHKIQGIGAGF+P LD+ I+DE + +SS EA Sbjct: 262 FIKERKPELKVIGVEPTESAILSGGKPGPHKIQGIGAGFVPKNLDLAIVDEYIAISSEEA 321
Query: 362 IEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPENAGKLIVVVFPSFGERYLSTVLFQSV 541 IE +KQLAL+EGLL QVAKRPENAGKLI VVFPSFGERYLST LFQS+ Sbjct: 322 IETSKQLALQEGLLVGISSGAAAAAAIQVAKRPENAGKLIAVVFPSFGERYLSTQLFQSI 381
Query: 542 REAAEKMQPE 571 RE E+MQPE Sbjct: 382 REECEQMQPE 391
>sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2 Length = 383
Score = 239 bits (609), Expect = 1e-62 Identities = 113/190 (59%), Positives = 141/190 (74%) Frame = +2
Query: 2 AEEIVNKTPNAYMLQQFENPANPKVHFETTGPEIWEDTAGKIDILISXXXXXXXXXXXXR 181 AEEI+ KTP++YMLQQF+NPANPK+H+ETTGPEIWEDT GK+DI ++ R Sbjct: 194 AEEILKKTPDSYMLQQFDNPANPKIHYETTGPEIWEDTKGKVDIFVAGIGTGGTISGVGR 253
Query: 182 FLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQGIGAGFIPGILDVDILDEVLQVSSNEA 361 +L EPTES++L+GGKPGPHKIQG+GAGF+P LD+ ++DEV++VSS EA Sbjct: 254 YLKERNPGVQVIGIEPTESNILSGGKPGPHKIQGLGAGFVPSNLDLGVMDEVIEVSSEEA 313
Query: 362 IEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPENAGKLIVVVFPSFGERYLSTVLFQSV 541 +EMAKQLA+KEGLL ++ KRPENAGKLI VVFPSFGERYLS++LFQS+ Sbjct: 314 VEMAKQLAMKEGLLVGISSGAAAAAAVRIGKRPENAGKLIAVVFPSFGERYLSSILFQSI 373
Query: 542 REAAEKMQPE 571 RE E M+PE Sbjct: 374 REECENMKPE 383
>sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3 Length = 430
Score = 238 bits (607), Expect = 2e-62 Identities = 119/190 (62%), Positives = 137/190 (72%) Frame = +2
Query: 2 AEEIVNKTPNAYMLQQFENPANPKVHFETTGPEIWEDTAGKIDILISXXXXXXXXXXXXR 181 AEEI+ TP+AYMLQQF+NPANPK+H+ETTGPEIW+DT GK+DI ++ R Sbjct: 240 AEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGR 299
Query: 182 FLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQGIGAGFIPGILDVDILDEVLQVSSNEA 361 F+ EPTES +L+GGKPGPHKIQGIGAGFIP LD I+DEV+ +SS EA Sbjct: 300 FIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEA 359
Query: 362 IEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPENAGKLIVVVFPSFGERYLSTVLFQSV 541 IE AKQLALKEGL+ +VAKRPENAGKLI VVFPSFGERYLST LFQS+ Sbjct: 360 IETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLIAVVFPSFGERYLSTPLFQSI 419
Query: 542 REAAEKMQPE 571 RE EKMQPE Sbjct: 420 REEVEKMQPE 429
>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1 Length = 325
Score = 236 bits (601), Expect = 8e-62 Identities = 120/191 (62%), Positives = 141/191 (73%) Frame = +2
Query: 2 AEEIVNKTPNAYMLQQFENPANPKVHFETTGPEIWEDTAGKIDILISXXXXXXXXXXXXR 181 AEEI +KTPN+Y+LQQFENPANPKVH+ETTGPEIW+ T GKIDI +S + Sbjct: 135 AEEIRDKTPNSYILQQFENPANPKVHYETTGPEIWKGTGGKIDIFVSGIGTGGTITGAGK 194
Query: 182 FLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQGIGAGFIPGILDVDILDEVLQVSSNEA 361 +L EP ES+VL+GGKPGPHKIQG+GAGFIPG+LDV+I+DEV+Q+SS E+ Sbjct: 195 YLKEQNPDVKLIGLEPVESAVLSGGKPGPHKIQGLGAGFIPGVLDVNIIDEVVQISSEES 254
Query: 362 IEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPENAGKLIVVVFPSFGERYLSTVLFQSV 541 IEMAK LALKEGLL +VAKRPENAGKLIV VFPSFGERYLS+VLF SV Sbjct: 255 IEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVAVFPSFGERYLSSVLFDSV 314
Query: 542 REAAEKMQPEA 574 R+ AE M E+ Sbjct: 315 RKEAESMVIES 325
>sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2 Length = 325
Score = 236 bits (601), Expect = 8e-62 Identities = 122/190 (64%), Positives = 139/190 (73%) Frame = +2
Query: 2 AEEIVNKTPNAYMLQQFENPANPKVHFETTGPEIWEDTAGKIDILISXXXXXXXXXXXXR 181 AEEI KTPN+Y+LQQFENPANPK+H+ETTGPEIW+ TAGKID L+S R Sbjct: 135 AEEIQAKTPNSYILQQFENPANPKIHYETTGPEIWKATAGKIDGLVSGIGTGGTITGTGR 194
Query: 182 FLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQGIGAGFIPGILDVDILDEVLQVSSNEA 361 +L EP ES+VL GGKPGPHKIQGIGAGFIPG+LDVD+LDE LQVSS+EA Sbjct: 195 YLREQNPNVKLYGVEPVESAVLNGGKPGPHKIQGIGAGFIPGVLDVDLLDETLQVSSDEA 254
Query: 362 IEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPENAGKLIVVVFPSFGERYLSTVLFQSV 541 IE AK LALKEGLL ++AKRPENAGKL VVVFPSFGERYLS+VLFQS+ Sbjct: 255 IETAKALALKEGLLVGISSGAAAAAAVRLAKRPENAGKLFVVVFPSFGERYLSSVLFQSI 314
Query: 542 REAAEKMQPE 571 ++ AE M E Sbjct: 315 KKEAESMVVE 324
>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1 Length = 325
Score = 233 bits (594), Expect = 5e-61 Identities = 113/187 (60%), Positives = 141/187 (75%) Frame = +2
Query: 2 AEEIVNKTPNAYMLQQFENPANPKVHFETTGPEIWEDTAGKIDILISXXXXXXXXXXXXR 181 A+E+ K PN+Y+LQQFENPANPK+H+ETTGPEIW+ TAGK+DIL+S + Sbjct: 135 ADELAAKMPNSYILQQFENPANPKIHYETTGPEIWKATAGKVDILVSGIGTGGTVTGTGK 194
Query: 182 FLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQGIGAGFIPGILDVDILDEVLQVSSNEA 361 +L EPTES++L+GG+PGPHKIQGIGAGF+PG+LDV++LDEV+QVSS+EA Sbjct: 195 YLKEQNPEIKIYGVEPTESAILSGGRPGPHKIQGIGAGFVPGVLDVNLLDEVVQVSSDEA 254
Query: 362 IEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPENAGKLIVVVFPSFGERYLSTVLFQSV 541 I MAKQLALKEGLL +VA+RPEN GKL+VVVFPSFGERYLS+VLF+S+ Sbjct: 255 ISMAKQLALKEGLLVGISSGAAAVAAIRVAQRPENKGKLVVVVFPSFGERYLSSVLFESI 314
Query: 542 REAAEKM 562 + AE M Sbjct: 315 KREAENM 321
>sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1 Length = 325
Score = 230 bits (587), Expect = 4e-60 Identities = 116/190 (61%), Positives = 138/190 (72%) Frame = +2
Query: 2 AEEIVNKTPNAYMLQQFENPANPKVHFETTGPEIWEDTAGKIDILISXXXXXXXXXXXXR 181 AEE+ KTPN+Y+LQQFEN ANPK+H+ETTGPEIW+ T GKID L+S + Sbjct: 136 AEELAAKTPNSYILQQFENAANPKIHYETTGPEIWKGTGGKIDGLVSGIGTGGTITGTGK 195
Query: 182 FLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQGIGAGFIPGILDVDILDEVLQVSSNEA 361 +L EPTES++L GGKPGPHKIQGIGAGFIPG+LDVDI+DE +QVSS+E+ Sbjct: 196 YLQEQNPNIKLYGVEPTESAILNGGKPGPHKIQGIGAGFIPGVLDVDIIDETIQVSSDES 255
Query: 362 IEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPENAGKLIVVVFPSFGERYLSTVLFQSV 541 IEMAK LALKEGLL +VA+RPENAGKL VVVFPSFGERYLS+VLF S+ Sbjct: 256 IEMAKSLALKEGLLVGISSGAAAAAAIKVAQRPENAGKLFVVVFPSFGERYLSSVLFHSI 315
Query: 542 REAAEKMQPE 571 ++ AE M E Sbjct: 316 KKEAESMVVE 325
>sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=2 SV=1 Length = 325
Score = 229 bits (585), Expect = 6e-60 Identities = 115/187 (61%), Positives = 135/187 (72%) Frame = +2
Query: 2 AEEIVNKTPNAYMLQQFENPANPKVHFETTGPEIWEDTAGKIDILISXXXXXXXXXXXXR 181 AEEI KTPN+Y+LQQFENPANPK+H+ETTGPEIW + GKID L+S + Sbjct: 135 AEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWRGSGGKIDALVSGIGTGGTVTGAGK 194
Query: 182 FLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQGIGAGFIPGILDVDILDEVLQVSSNEA 361 +L EP ES++L+GGKPGPHKIQGIGAGFIPG+LDV++LDEV+QVSS E+ Sbjct: 195 YLKEQNPNIKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLDVNLLDEVIQVSSEES 254
Query: 362 IEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPENAGKLIVVVFPSFGERYLSTVLFQSV 541 IE AK LALKEGLL ++AKRPENAGKLIV VFPSFGERYLSTVLF+SV Sbjct: 255 IETAKLLALKEGLLVGISSGAAAAAAIRIAKRPENAGKLIVAVFPSFGERYLSTVLFESV 314
Query: 542 REAAEKM 562 + E M Sbjct: 315 KRETENM 321
>sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2 SV=1 Length = 325
Score = 228 bits (581), Expect = 2e-59 Identities = 114/190 (60%), Positives = 139/190 (73%) Frame = +2
Query: 2 AEEIVNKTPNAYMLQQFENPANPKVHFETTGPEIWEDTAGKIDILISXXXXXXXXXXXXR 181 AEEI KTPN+Y+LQQFENPANPK+H+ETTGPEIW+ + GK+D L S + Sbjct: 135 AEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWKGSNGKVDALASGIGTGGTITGSGK 194
Query: 182 FLXXXXXXXXXXXXEPTESSVLAGGKPGPHKIQGIGAGFIPGILDVDILDEVLQVSSNEA 361 +L EP ES++L+GGKPGPHKIQGIGAGFIPG+L+V+++D+V+QVSS E+ Sbjct: 195 YLREQNPNVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLEVNLIDDVVQVSSEES 254
Query: 362 IEMAKQLALKEGLLXXXXXXXXXXXXXQVAKRPENAGKLIVVVFPSFGERYLSTVLFQSV 541 IEMAK LALKEGLL +VAKRPENAGKLIVV+FPSFGERYLS+VLF++V Sbjct: 255 IEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVVIFPSFGERYLSSVLFETV 314
Query: 542 REAAEKMQPE 571 R AE M E Sbjct: 315 RREAENMTVE 324
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RMD3 |
Definition |
tr|A9RMD3|A9RMD3_PHYPA Cysteine synthase OS=Physcomitrella patens subsp. patens |
Align length |
190 |
Score (bit) |
263.0 |
E-value |
4.0e-69 |
Report |
|