DK952746 |
Clone id |
TST38A01NGRL0014_P02 |
Library |
TST38 |
Length |
635 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_P02. 5' end sequence. |
Accession |
DK952746 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL703Contig1 |
Sequence |
GTCCGCTATGGAGTCCTTCTGTCCTGCCGATCGCCATGGCGAAGGTGTTTCTTTCGATCG GATGGTGTCTGAAGGCGTCCAGATGTGTCCTTTTCTCAGGAATATTGGCGTCTCAACCAA TTTCTCCTTCTCGTCTCTCTCGAGATTTCCTGCACCGGTGAGAGGAAATCATGGTCCCAT ATTTGAGGATGGCCCTAACTTTGATCTGGCTTTCAAGCTATTTCATGGCCAAAATGGGGT GGTTCCCTTGTCGCAGCACTCTCAATTGGGAGGTAAAAATGTTGAGGAACAAGCCTCTAG TATAAAATTCCATCCTTTAGCAGCTTCTGCAGCAGCCATAAGCTTATCAGCACTAGGAGC ATCCGGTCCATTTGGCTTTGATGCGTTTATGTCAAAGAGATTACAGGCAAAGAAGAACAA TAAACCTCAGAAAAAGGAGAAACAGTATGAGGAGGAGAAGAAACGACCAGCTTCTTCGGA GCATGAAGCTTGGAGTAATGACTGGCTGCAGACAGGAAATTGCCCAATTGCCAAATCTTT CAGAGCTGTAAGTGGTGTGCTTCCGCTGGTTGCCAAGGTTCTACAGCCGCCTCCTGGTTT AAAGGTGCGGTGCCCGCCTGCCATTGTTGCTGCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P01134 |
Definition |
sp|P01134|TGFA_RAT Protransforming growth factor alpha OS=Rattus norvegicus |
Align length |
32 |
Score (bit) |
32.3 |
E-value |
2.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PI77 |
Definition |
tr|A7PI77|A7PI77_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
188 |
Score (bit) |
183.0 |
E-value |
7.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952746|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_P02, 5' (635 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PI77|A7PI77_VITVI Chromosome chr13 scaffold_17, whole genom... 183 7e-45 tr|A5BGJ2|A5BGJ2_VITVI Putative uncharacterized protein OS=Vitis... 183 7e-45 tr|A7QQ42|A7QQ42_VITVI Chromosome chr2 scaffold_140, whole genom... 176 8e-43 tr|Q9SW23|Q9SW23_ARATH Putative uncharacterized protein F13M23.1... 169 1e-40 tr|A5AQN7|A5AQN7_VITVI Putative uncharacterized protein OS=Vitis... 169 1e-40 tr|A9TXN3|A9TXN3_PHYPA Predicted protein (Fragment) OS=Physcomit... 166 1e-39 tr|B7FIB6|B7FIB6_MEDTR Putative uncharacterized protein OS=Medic... 165 2e-39 tr|A9RHT9|A9RHT9_PHYPA Predicted protein (Fragment) OS=Physcomit... 162 2e-38 tr|A9RHU0|A9RHU0_PHYPA Predicted protein (Fragment) OS=Physcomit... 161 4e-38 tr|Q9FRM3|Q9FRM3_ORYSA Putative uncharacterized protein OSJNBa00... 160 5e-38 tr|Q7XBR1|Q7XBR1_ORYSJ Os10g0580900 protein OS=Oryza sativa subs... 160 5e-38 tr|B4FFV1|B4FFV1_MAIZE Putative uncharacterized protein OS=Zea m... 160 6e-38 tr|Q9FHJ5|Q9FHJ5_ARATH Genomic DNA, chromosome 5, P1 clone:MFC19... 158 2e-37 tr|Q949T0|Q949T0_ARATH Putative uncharacterized protein At5g4541... 158 2e-37 tr|Q8L9B2|Q8L9B2_ARATH Putative uncharacterized protein OS=Arabi... 155 3e-36 tr|Q5VRL0|Q5VRL0_ORYSJ Putative uncharacterized protein OSJNBa00... 153 7e-36 tr|B8B7E8|B8B7E8_ORYSI Putative uncharacterized protein OS=Oryza... 153 7e-36 tr|B8B1M7|B8B1M7_ORYSI Putative uncharacterized protein OS=Oryza... 153 7e-36 tr|Q7XIM9|Q7XIM9_ORYSJ Os07g0159500 protein OS=Oryza sativa subs... 150 6e-35 tr|A3BGR4|A3BGR4_ORYSJ Putative uncharacterized protein OS=Oryza... 150 6e-35 tr|A3B7S6|A3B7S6_ORYSJ Putative uncharacterized protein OS=Oryza... 147 4e-34 tr|B6TF41|B6TF41_MAIZE Putative uncharacterized protein OS=Zea m... 142 2e-32 tr|B4F7U4|B4F7U4_MAIZE Putative uncharacterized protein OS=Zea m... 142 2e-32 tr|B8AVD3|B8AVD3_ORYSI Putative uncharacterized protein OS=Oryza... 99 2e-19 tr|Q0DF43|Q0DF43_ORYSJ Os06g0115800 protein (Fragment) OS=Oryza ... 88 5e-16 tr|A7Q4Z4|A7Q4Z4_VITVI Chromosome undetermined scaffold_51, whol... 58 4e-07 tr|A7PN65|A7PN65_VITVI Chromosome chr1 scaffold_22, whole genome... 51 5e-05 tr|A8SHV6|A8SHV6_9FIRM Putative uncharacterized protein OS=Faeca... 35 3.8 tr|A8S935|A8S935_9FIRM Putative uncharacterized protein OS=Faeca... 35 3.8 tr|Q5PPZ2|Q5PPZ2_XENLA LOC496037 protein OS=Xenopus laevis GN=tg... 34 6.5
>tr|A7PI77|A7PI77_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018226001 PE=4 SV=1 Length = 358
Score = 183 bits (465), Expect = 7e-45 Identities = 93/188 (49%), Positives = 117/188 (62%) Frame = +2
Query: 71 EGVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPL 250 + + CPFLRNI TNFSF+S FP PVRG GPIFEDGPNFD+AF++FHG++GVVPL Sbjct: 22 QDILRCPFLRNINEPTNFSFASPMAFPMPVRGAKGPIFEDGPNFDMAFRVFHGRDGVVPL 81
Query: 251 SQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXXPFGFDAFMSKRLQAXXXXXXX 430 S L +N E + + +F+P PF FD+F +K Sbjct: 82 SGRVFLRSENFEPEQAPPQFNPLAAKAATISLSGFGLGGPFSFDSFSNK-----WKNQKR 136
Query: 431 XXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVLQPPPGLKVR 610 + S+HEA SN+WL+TGNCPIAKS+RAVS V+P+VAK LQPPPG+K + Sbjct: 137 ESKSSKKEPSSQRGDSKHEAMSNEWLETGNCPIAKSYRAVSHVIPIVAKALQPPPGMKFK 196
Query: 611 CPPAIVAA 634 CPPAIVAA Sbjct: 197 CPPAIVAA 204
>tr|A5BGJ2|A5BGJ2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005903 PE=4 SV=1 Length = 584
Score = 183 bits (465), Expect = 7e-45 Identities = 93/188 (49%), Positives = 117/188 (62%) Frame = +2
Query: 71 EGVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPL 250 + + CPFLRNI TNFSF+S FP PVRG GPIFEDGPNFD+AF++FHG++GVVPL Sbjct: 248 QDILRCPFLRNINEPTNFSFASPMAFPMPVRGAKGPIFEDGPNFDMAFRVFHGRDGVVPL 307
Query: 251 SQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXXPFGFDAFMSKRLQAXXXXXXX 430 S L +N E + + +F+P PF FD+F +K Sbjct: 308 SGRVFLRSENFEPEQAPPQFNPLAAKAATISLSGFGLGGPFSFDSFSNK-----WKNQKR 362
Query: 431 XXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVLQPPPGLKVR 610 + S+HEA SN+WL+TGNCPIAKS+RAVS V+P+VAK LQPPPG+K + Sbjct: 363 ESKSSKKEPSSQRGDSKHEAMSNEWLETGNCPIAKSYRAVSHVIPIVAKALQPPPGMKFK 422
Query: 611 CPPAIVAA 634 CPPAIVAA Sbjct: 423 CPPAIVAA 430
>tr|A7QQ42|A7QQ42_VITVI Chromosome chr2 scaffold_140, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003198001 PE=4 SV=1 Length = 353
Score = 176 bits (447), Expect = 8e-43 Identities = 95/188 (50%), Positives = 115/188 (61%) Frame = +2
Query: 71 EGVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPL 250 + +Q CPFLRNI T+FSF+S S F PVRG GPIFEDGPNFD+AFKLFHG++GVVPL Sbjct: 20 QDIQKCPFLRNINKPTSFSFTS-SNFSIPVRGARGPIFEDGPNFDMAFKLFHGKDGVVPL 78
Query: 251 SQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXXPFGFDAFMSKRLQAXXXXXXX 430 S S +N+ + ++ F+P PF FD F K Sbjct: 79 SGRSSFHNENLVPEPVAL-FNPLAAKAATISLSAFGPGGPFSFDFFSEKWKNQKRKSESS 137
Query: 431 XXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVLQPPPGLKVR 610 SS+HEA N+WL+TGNCPIAKS+RAVS VLPLV K LQPPPG+K++ Sbjct: 138 NKKQSSSKGGD---SSKHEAMGNEWLKTGNCPIAKSYRAVSHVLPLVTKALQPPPGMKLK 194
Query: 611 CPPAIVAA 634 CPPAIVAA Sbjct: 195 CPPAIVAA 202
>tr|Q9SW23|Q9SW23_ARATH Putative uncharacterized protein F13M23.170 (Putative uncharacterized protein At4g25030) (At4g25030) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=F13M23.170 PE=2 SV=1 Length = 344
Score = 169 bits (428), Expect = 1e-40 Identities = 91/183 (49%), Positives = 103/183 (56%) Frame = +2
Query: 86 CPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPLSQHSQ 265 CPFLRNI TN SFSS FP P R GPIFEDGPNFD AF+LFHGQ+GVVPLS ++ Sbjct: 19 CPFLRNINEPTNLSFSSSLPFPIPARAGKGPIFEDGPNFDTAFRLFHGQDGVVPLSDTAR 78
Query: 266 LGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXXPFGFDAFMSKRLQAXXXXXXXXXXXX 445 E Q FHP PFGFDAF Sbjct: 79 -----TEAQKPVPVFHPLAAKAATISLSSFGSGGPFGFDAFSD-----------MFKNQK 122
Query: 446 XXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVLQPPPGLKVRCPPAI 625 + HEA ++WL+TGNCPIAKS+RAVSGV PLVAK+LQPPPG+K +CP AI Sbjct: 123 KKSDSSKNKGGNHEAMGDEWLKTGNCPIAKSYRAVSGVAPLVAKILQPPPGMKFKCPQAI 182
Query: 626 VAA 634 V A Sbjct: 183 VTA 185
>tr|A5AQN7|A5AQN7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038296 PE=4 SV=1 Length = 381
Score = 169 bits (428), Expect = 1e-40 Identities = 97/213 (45%), Positives = 119/213 (55%), Gaps = 25/213 (11%) Frame = +2
Query: 71 EGVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPL 250 + +Q CPFLRNI T+FSF+S S F PVRG GPIFEDGPNFD+AFKLFHG++GVVPL Sbjct: 20 QDIQKCPFLRNINKPTSFSFTS-SNFSIPVRGARGPIFEDGPNFDMAFKLFHGKDGVVPL 78
Query: 251 SQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXXPFGFDAFMSK----------- 397 S S +N+ + ++ F+P PF FD F K Sbjct: 79 SGRSSFHNENLVPEPVAL-FNPLAAKAATISLSAFGPGGPFSFDFFSEKWKNQKRKSESS 137
Query: 398 -RLQAXXXXXXXXXXXXXXXXXXRPA-------------SSEHEAWSNDWLQTGNCPIAK 535 + Q+ A SS+HEA N+WL+TGNCPIAK Sbjct: 138 NKKQSSSKVMFGFRDINLTHSSQXQAPTYRMFISFQGGDSSKHEAMGNEWLKTGNCPIAK 197
Query: 536 SFRAVSGVLPLVAKVLQPPPGLKVRCPPAIVAA 634 S+RAVS VLPLV K LQPPPG+K++CPPAIVAA Sbjct: 198 SYRAVSHVLPLVTKALQPPPGMKLKCPPAIVAA 230
>tr|A9TXN3|A9TXN3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_5113 PE=4 SV=1 Length = 290
Score = 166 bits (420), Expect = 1e-39 Identities = 95/195 (48%), Positives = 122/195 (62%), Gaps = 9/195 (4%) Frame = +2
Query: 77 VQMCPFLRNIGVSTNFSFSSLS-RFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPLS 253 V++CPFLRNIGV+T+F+FS+L+ PAP R GPIFEDGP F+ +F+LFHG++GVVPL+ Sbjct: 1 VELCPFLRNIGVTTSFAFSNLNFPVPAPRRAGRGPIFEDGPGFENSFRLFHGKDGVVPLA 60
Query: 254 QHSQLGGKNVEE------QASSIKFHPXXXXXXXXXXXXXXXXXPFGFDAFMSKR-LQAX 412 + S G + E +AS++ FHP PFGFD FM+K+ ++ Sbjct: 61 RAS--GEQQSSEPLVNSTEASNLSFHPLSARAAAISLSPFGPAGPFGFDIFMAKQNVKKP 118
Query: 413 XXXXXXXXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVL-QP 589 S HEA S++WL TG CPIAKSFRAVSGVLPLV+K+L Q Sbjct: 119 SKKQPKKEPQPDKEHKSSLESHMHEAMSSEWLATGQCPIAKSFRAVSGVLPLVSKLLPQL 178
Query: 590 PPGLKVRCPPAIVAA 634 P G+K RCPPAIVAA Sbjct: 179 PKGMKYRCPPAIVAA 193
>tr|B7FIB6|B7FIB6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 355
Score = 165 bits (418), Expect = 2e-39 Identities = 95/198 (47%), Positives = 113/198 (57%), Gaps = 4/198 (2%) Frame = +2
Query: 53 FDRMVSE-GVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHG 229 F R ++E + CPFLRNI TNFSF S FP P R GPIFEDGPNFDLAF+LFHG Sbjct: 4 FARDINEDSILRCPFLRNINEPTNFSFVSPLAFPMPARAAKGPIFEDGPNFDLAFRLFHG 63
Query: 230 QNGVVPLSQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXXPFGFDAFMSKRLQA 409 +GVVPLS+ + V +A +F+P PFGFD+F K Sbjct: 64 SDGVVPLSERTFQCFDKVRPEAPKSQFNPLAAKAATISLSSFGFGGPFGFDSFHEK---- 119
Query: 410 XXXXXXXXXXXXXXXXXXRPAS---SEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKV 580 P+S S+HEA NDWLQ GNCPIAKS++AVS VLPLVAKV Sbjct: 120 -----WKNQNKKSKSSKKEPSSKDGSKHEA-GNDWLQNGNCPIAKSYQAVSKVLPLVAKV 173
Query: 581 LQPPPGLKVRCPPAIVAA 634 +QPP G+K +CP IV A Sbjct: 174 IQPPAGMKYKCPQVIVEA 191
>tr|A9RHT9|A9RHT9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_51590 PE=4 SV=1 Length = 305
Score = 162 bits (409), Expect = 2e-38 Identities = 91/194 (46%), Positives = 116/194 (59%), Gaps = 8/194 (4%) Frame = +2
Query: 77 VQMCPFLRNIGVSTNFSFSSLS-RFPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPLS 253 V++CPFLRNIGV+T+F+FS+L PAP R GPIFEDGP F+ +F+LFHG++GVVPL Sbjct: 1 VELCPFLRNIGVTTSFAFSNLKFPVPAPTRAGRGPIFEDGPGFENSFRLFHGKDGVVPLK 60
Query: 254 QHSQLGGKNVEE-----QASSIKFHPXXXXXXXXXXXXXXXXXPFGFDAFMSKR-LQAXX 415 + S G +N A + FHP PFGFD FM+++ + Sbjct: 61 RAS--GEQNARSFTETLDAEDLSFHPLSARAATISLSSFGAGGPFGFDGFMARQNAKKPK 118
Query: 416 XXXXXXXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVL-QPP 592 + S HEA ++WL TG CPIAKSFRAVSGVLPLV+K+L + P Sbjct: 119 EKKPKKETEPEKKRRSKLESHMHEAMGSEWLATGQCPIAKSFRAVSGVLPLVSKLLPKLP 178
Query: 593 PGLKVRCPPAIVAA 634 G+K RCPPAIVAA Sbjct: 179 QGMKYRCPPAIVAA 192
>tr|A9RHU0|A9RHU0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_51572 PE=4 SV=1 Length = 301
Score = 161 bits (407), Expect = 4e-38 Identities = 92/194 (47%), Positives = 114/194 (58%), Gaps = 8/194 (4%) Frame = +2
Query: 77 VQMCPFLRNIGVSTNFSFSSLSR-FPAPVRGNHGPIFEDGPNFDLAFKLFHGQNGVVPLS 253 V++CPFLRNIGVST+F FS L PAP R GPIFEDGP F+ +F+LFHG++GVVPL Sbjct: 1 VELCPFLRNIGVSTSFVFSKLKLPTPAPTRAGRGPIFEDGPGFENSFRLFHGKDGVVPLK 60
Query: 254 QHSQLGGKNVEE-----QASSIKFHPXXXXXXXXXXXXXXXXXPFGFDAFMSKR-LQAXX 415 + S G +N A + FHP PFGFD FM+++ + Sbjct: 61 RAS--GEQNARSFTETLDAEDLSFHPLSARAATISLSSFGAGGPFGFDGFMARQNAKKPK 118
Query: 416 XXXXXXXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVL-QPP 592 + S HEA ++WL TG CPIAKSFRAVSGVLPLV+K+L + P Sbjct: 119 EKKPKKETEPEKKRRSKLESHMHEAMGSEWLATGQCPIAKSFRAVSGVLPLVSKLLPKLP 178
Query: 593 PGLKVRCPPAIVAA 634 G+K RCPPAIVAA Sbjct: 179 QGMKYRCPPAIVAA 192
>tr|Q9FRM3|Q9FRM3_ORYSA Putative uncharacterized protein OSJNBa0056G17.7 OS=Oryza sativa GN=OSJNBa0056G17.7 PE=4 SV=1 Length = 352
Score = 160 bits (406), Expect = 5e-38 Identities = 87/193 (45%), Positives = 114/193 (59%) Frame = +2
Query: 56 DRMVSEGVQMCPFLRNIGVSTNFSFSSLSRFPAPVRGNHGPIFEDGPNFDLAFKLFHGQN 235 D V G++ CPFLRNI T+FSFSS++ FP P RG+ GPIFEDGPNFD+AF++FHGQ+ Sbjct: 17 DNSVQHGIERCPFLRNINEPTSFSFSSVN-FPVPARGDKGPIFEDGPNFDMAFRVFHGQD 75
Query: 236 GVVPLSQHSQLGGKNVEEQASSIKFHPXXXXXXXXXXXXXXXXXPFGFDAFMSKRLQAXX 415 GVVPLS H + +F+P F F F +KR + Sbjct: 76 GVVPLS-HGSFERFEKPMPKPNPEFNPLAAKAATISLSAFGGF--FSFGDFSNKRNKKNS 132
Query: 416 XXXXXXXXXXXXXXXXRPASSEHEAWSNDWLQTGNCPIAKSFRAVSGVLPLVAKVLQPPP 595 + HEA SN+WL+ G CP+AKS+RA+SGV+PLVAK++ PP Sbjct: 133 NQKKPNNLPQNGG-----QPNNHEALSNEWLEMGQCPLAKSYRALSGVVPLVAKMMTPPA 187
Query: 596 GLKVRCPPAIVAA 634 G+K+RCPPA+VAA Sbjct: 188 GMKLRCPPAVVAA 200
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