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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952753
Clone id TST38A01NGRL0014_P09
Library
Length 550
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_P09. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GAATGGCCCAATTGGGTATTGCTTTCTCCATCATTGGTGAGATCATCACAGGGAAGGGAA
CACTTGCTCAGTTGAACATTGAGACAGGCGTGCCCCTCACTGAAATTGAGCCCCTTGTTC
TTGCATGGATCGCGTTCTTCTTTGTAGCAGCGATCAATCCGGGTACGGGAAAGTTCATCA
CAGACGAAGAGGAAGAGTAGAGAGAGGAAGAGGAAGAGTAGAGAATGCAACTTATCCTCA
TCTCTTATTCTTCAGCGGACCGGCCTCTCCCAATTGCTTTGTGTGCACACTTTAATTGTT
GTTTGCCGATGTTGTTTGTAAGTATGACATGGTTTCATTACTCTCACACAGCAGTGATGA
AGAGGAGAGTATGGACCTTATCAATTTCCTACATGTTACCGTTTTTGCTTGTCAACAGCA
AATTAGCCTCATTTTGTAACGTGATCATCAAGTAATCAGACCCCAAGTTTCAGTTACGAA
TGGTATTAGAAAAGCAATTATTAATACTGAGCATGTGCATGTGTGAAAAAAAAAAAAAAA
AAAAACCCAA
■■Homology search results ■■ -
sp_hit_id Q02060
Definition sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea
Align length 51
Score (bit) 89.7
E-value 6.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952753|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_P09, 5'
         (495 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplasti...    90   6e-18
sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplasti...    87   4e-17
sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplasti...    87   4e-17
sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplasti...    87   4e-17
sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplasti...    86   9e-17
sp|Q9DA01|EPPI_MOUSE Eppin OS=Mus musculus GN=Spinlw1 PE=2 SV=1        32   2.1  
sp|A1RRA6|COXX_PYRIL Protoheme IX farnesyltransferase OS=Pyrobac...    31   2.7  
sp|A4WIG5|COXX_PYRAR Protoheme IX farnesyltransferase OS=Pyrobac...    31   2.7  
sp|Q8MJ24|LOXL4_BOVIN Lysyl oxidase homolog 4 OS=Bos taurus GN=L...    31   3.5  
sp|A3MXJ5|COXX2_PYRCJ Protoheme IX farnesyltransferase 2 OS=Pyro...    31   3.5  
sp|P22462|KCNC2_RAT Potassium voltage-gated channel subfamily C ...    30   7.9  
sp|Q96PR1|KCNC2_HUMAN Potassium voltage-gated channel subfamily ...    30   7.9  

>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic
           OS=Spinacia oleracea GN=PSBS PE=1 SV=1
          Length = 274

 Score = 89.7 bits (221), Expect = 6e-18
 Identities = 43/51 (84%), Positives = 46/51 (90%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLNIETGVP+ EIEPLVL  + FFF+AAINPGTGKFITD
Sbjct: 219 IGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAINPGTGKFITD 269



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE ITGKG L+QLN+ETG+P+ E EPL+L +I F  + AI      G+F+ +
Sbjct: 115 LGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDE 167


>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic
           OS=Nicotiana tabacum GN=PSBS PE=2 SV=1
          Length = 274

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 42/51 (82%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLN ETGVP+ EIEPL+L  I FFFVAAINPGTGKF+TD
Sbjct: 220 IGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTD 270



 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAIN--PGTGKFITD 155
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKFI D
Sbjct: 114 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDD 166


>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum sogarandinum GN=PSBS PE=2 SV=1
          Length = 276

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 43/51 (84%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLN ETGVP+ EIEPL+L  IAFFF AAINPGTGKFITD
Sbjct: 222 IGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITD 272



 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G+FI D
Sbjct: 116 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDD 168


>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum lycopersicum GN=PSBS PE=3 SV=1
          Length = 276

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 43/51 (84%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLN ETGVP+ EIEPL+L  IAFFF AAINPGTGKFITD
Sbjct: 222 IGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITD 272



 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKF+ D
Sbjct: 116 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDD 168


>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic
           OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1
          Length = 265

 Score = 85.9 bits (211), Expect = 9e-17
 Identities = 41/51 (80%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLNIETG+P+ +IEPLVL  +AFFF AAINPG GKFITD
Sbjct: 210 IGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITD 260



 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE +TGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKF+ D
Sbjct: 106 LGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD 158


>sp|Q9DA01|EPPI_MOUSE Eppin OS=Mus musculus GN=Spinlw1 PE=2 SV=1
          Length = 134

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -2

Query: 149 DELSRTRIDRCYKEERDPCKNKGLNFSEGHACLNVQLSKCSLPCD 15
           +E      D C ++   P K K   F+ G  CLN Q   CSLP D
Sbjct: 38  EECEHQERDLCTRDRDCPKKEKCCVFNCGKKCLNPQQDICSLPKD 82


>sp|A1RRA6|COXX_PYRIL Protoheme IX farnesyltransferase
           OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)
           GN=ctaB PE=3 SV=1
          Length = 278

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 22/63 (34%)
 Frame = +3

Query: 222 SADRPLPIALCAHFNCC--------------------LPMLFVSMTWFHYS--HTAVMKR 335
           +A RPLP  L   FN                      LP LFV++ WF Y+  +T  +KR
Sbjct: 68  TARRPLPAGLIPEFNALVYSLALSAAGITLSFYLLGPLPGLFVALGWFFYAVVYTIWLKR 127

Query: 336 RVW 344
           + W
Sbjct: 128 KTW 130


>sp|A4WIG5|COXX_PYRAR Protoheme IX farnesyltransferase
           OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM
           11321) GN=ctaB PE=3 SV=2
          Length = 279

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +3

Query: 210 ISYSSADRPLPIALCAHFNCCLPMLFVSMTWFHYS--HTAVMKRRVW 344
           ++YS     L IAL       LP LFV + WF Y+  +T ++K+R W
Sbjct: 84  LAYSLVLSALGIALGFLLLGPLPGLFVFLGWFFYAVVYTVILKKRTW 130


>sp|Q8MJ24|LOXL4_BOVIN Lysyl oxidase homolog 4 OS=Bos taurus
           GN=LOXL4 PE=2 SV=1
          Length = 757

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/67 (28%), Positives = 26/67 (38%)
 Frame = +3

Query: 132 GTGKFITDXXXXXXXXXXXXXMQLILISYSSADRPLPIALCAHFNCCLPMLFVSMTWFHY 311
           GTG+F                 QL+  +    DRPL +  CAH   CL      M W  Y
Sbjct: 519 GTGRFSAGVSCTDSAPDLVMNAQLVQETAYLEDRPLSLLYCAHEENCLSQSADRMDW-PY 577

Query: 312 SHTAVMK 332
            H  +++
Sbjct: 578 GHRRLLR 584


>sp|A3MXJ5|COXX2_PYRCJ Protoheme IX farnesyltransferase 2
           OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1)
           GN=ctaB2 PE=3 SV=2
          Length = 278

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 213 SYSSADRPLPIALCAHFNCCLPMLFVSMTWFHY--SHTAVMKRRVW 344
           +Y+SA   L + L   +   LP LFV + WF Y   +T  +KRR W
Sbjct: 85  AYASAVSALGVLLSLAWLGPLPTLFVVLGWFSYVVVYTVWLKRRSW 130
tr_hit_id B2ZAP6
Definition tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossypioides kirkii
Align length 51
Score (bit) 88.2
E-value 2.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952753|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_P09, 5'
         (495 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossyp...    88   2e-16
tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossyp...    88   2e-16
tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossyp...    88   2e-16
tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert seque...    87   3e-16
tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza...    87   3e-16
tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa compone...    87   4e-16
tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa compone...    87   4e-16
tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Popul...    87   4e-16
tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative unchar...    86   7e-16
tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza...    86   7e-16
tr|Q259V3|Q259V3_ORYSA B0518A01.1 protein (H0814G11.22 protein) ...    86   7e-16
tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantag...    86   7e-16
tr|Q0J8R9|Q0J8R9_ORYSJ Os04g0690800 protein OS=Oryza sativa subs...    86   7e-16
tr|A2XZ94|A2XZ94_ORYSI Putative uncharacterized protein OS=Oryza...    86   7e-16
tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein (At1g445...    86   9e-16
tr|Q56ZF6|Q56ZF6_ARATH Photosystem II chlorophyll-binding protei...    86   9e-16
tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protei...    86   9e-16
tr|A9NYQ2|A9NYQ2_PICSI Putative uncharacterized protein OS=Picea...    84   4e-15
tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea...    84   4e-15
tr|A7NVD7|A7NVD7_VITVI Chromosome chr18 scaffold_1, whole genome...    84   4e-15
tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein ...    83   6e-15
tr|Q6WFB1|Q6WFB1_MAIZE Photosystem II subunit PsbS OS=Zea mays P...    81   3e-14
tr|B6TKD1|B6TKD1_MAIZE Photosystem II 22 kDa protein OS=Zea mays...    81   3e-14
tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding prote...    79   1e-13
tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragmen...    76   1e-12
tr|A4QPL4|A4QPL4_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    67   5e-10
tr|Q2VL34|Q2VL34_9LILI PSII subunit PsbS (Fragment) OS=Xerophyta...    65   1e-09
tr|A4QPL3|A4QPL3_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    65   2e-09
tr|Q3ECX1|Q3ECX1_ARATH Uncharacterized protein At1g44575.2 OS=Ar...    57   6e-07
tr|A8HPM5|A8HPM5_CHLRE Chloroplast photosystem II-associated 22 ...    55   2e-06

>tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein
           OS=Gossypioides kirkii PE=4 SV=1
          Length = 277

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLNIETG+P+++IEPLVL  +AFFF AAINPGTGKF+TD
Sbjct: 223 IGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFAAAINPGTGKFVTD 273



 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G+F+ +
Sbjct: 119 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDE 171


>tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossypium
           hirsutum PE=4 SV=1
          Length = 278

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLNIETG+P+++IEPLVL  +AFFF AAINPGTGKF+TD
Sbjct: 223 IGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAINPGTGKFVTD 273



 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKF+ +
Sbjct: 119 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE 171


>tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossypium
           raimondii PE=4 SV=1
          Length = 278

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLNIETG+P+++IEPLVL  +AFFF AAINPGTGKF+TD
Sbjct: 223 IGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAINPGTGKFVTD 273



 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKF+ +
Sbjct: 119 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDE 171


>tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0039A07.6 PE=2 SV=1
          Length = 268

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLNIETGVP+ EIEPLVL  + FFF+AAINPGTGKF++D
Sbjct: 214 IGEIITGKGALAQLNIETGVPINEIEPLVLFNVVFFFIAAINPGTGKFVSD 264



 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G F+ D
Sbjct: 109 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDD 161


>tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04589 PE=4 SV=1
          Length = 268

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLNIETGVP+ EIEPLVL  + FFF+AAINPGTGKF++D
Sbjct: 214 IGEIITGKGALAQLNIETGVPINEIEPLVLFNVVFFFIAAINPGTGKFVSD 264



 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G F+ D
Sbjct: 109 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSFVDD 161


>tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS2 PE=4 SV=1
          Length = 274

 Score = 87.0 bits (214), Expect = 4e-16
 Identities = 42/51 (82%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLN ETGVP+ EIEPL+L  I FFFVAAINPGTGKF+TD
Sbjct: 220 IGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTD 270



 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKFI D
Sbjct: 114 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDD 166


>tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS1 PE=2 SV=1
          Length = 277

 Score = 87.0 bits (214), Expect = 4e-16
 Identities = 42/51 (82%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLN ETGVP+ EIEPL+L  I FFFVAAINPGTGKF+TD
Sbjct: 223 IGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTD 273



 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE ITGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      GKFI D
Sbjct: 117 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDD 169


>tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 272

 Score = 87.0 bits (214), Expect = 4e-16
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLNIETG+P+ EIEPLVL  + FFF+AA+NPGTGKF+TD
Sbjct: 218 IGEIITGKGALAQLNIETGIPVNEIEPLVLFNVLFFFIAALNPGTGKFVTD 268



 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE ITGKG L+QLN+ETG+P+ E EPL+L +I F  + AI      G+F+ D
Sbjct: 114 LGEAITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDD 166


>tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative
           uncharacterized protein) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0039K24.28 PE=4 SV=2
          Length = 248

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 42/51 (82%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLNIETGVP+ EIEPL+L  I FFF AAINPGTGKF+TD
Sbjct: 193 IGEIITGKGALAQLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTD 243



 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE +TGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G+F+ D
Sbjct: 90  LGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDD 142


>tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza
           sativa subsp. japonica GN=PSII-S PE=2 SV=1
          Length = 254

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 42/51 (82%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINPGTGKFITD 155
           IGEIITGKG LAQLNIETGVP+ EIEPL+L  I FFF AAINPGTGKF+TD
Sbjct: 199 IGEIITGKGALAQLNIETGVPINEIEPLLLFNILFFFFAAINPGTGKFVTD 249



 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +3

Query: 3   IGEIITGKGTLAQLNIETGVPLTEIEPLVLAWIAFFFVAAINP--GTGKFITD 155
           +GE +TGKG LAQLN+ETG+P+ E EPL+L +I F  + AI      G+F+ D
Sbjct: 96  LGEAVTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDD 148