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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952759
Clone id TST38A01NGRL0014_P15
Library
Length 656
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_P15. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CAAAAGCTCTCACAAAAATCTGATATTTAGTGCCCAACGATCTCTCACTCGACGCACACT
CTCATCAAAAGCGCACTCTCTAGTGTACTTGTGAGTGTGCAGAGCTAAGTTGGCTTTACA
CACATACGCGCGCGCACACACCCAAACCCGTGCATTGCCTCCCTCAGCGTCTCCCTGCCT
GTGGCCGCCATGGCTCAATCTGCCCTTCTCTCCCGCTCCTCAGCGCTCGCTTCCTCCTTC
GCCAATTTCCAGGCAGGCTCCCGTATTGCAGCGTCGCAGGCCGGCGGCCTCTCCTTCGCT
CCCCTGCATTCCTCCAGGGTTTTCCAGTCCTCTCCCTTGAAGACAGTTGCCCTCTTTGGC
ACCAAGACTCCCAAGAAGACAACTGGGTCCAAGCCTGCCCCAAAGACGAAGGGAAAGGTT
GAGGATGGCATTTTCGGGACCTCCGGTGGAATTGGCTTCACCAAGCAAAACGAGCTCTTT
GTTGGCCGAGTCGCCATGCTTGGGTTTGCGGCCTCTATTCTAGGTGAGGCCATCACAGGA
AAGGGAACTCTTGCTCAATTCGACTTCGAGACAGGGTTGCCACTAACTGAGACAGAGCCC
CTTCTCCTCTTCTTCATTTTGTTTACATTGCTGGGGTGCTATTGGAGCTCTTGGTG
■■Homology search results ■■ -
sp_hit_id Q02060
Definition sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea
Align length 97
Score (bit) 66.2
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952759|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_P15, 5'
         (656 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplasti...    66   1e-10
sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplasti...    62   3e-09
sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplasti...    62   3e-09
sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplasti...    62   3e-09
sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplasti...    59   3e-08
sp|P51532|SMCA4_HUMAN Probable global transcription activator SN...    37   0.12 
sp|Q9NRR4|RNC_HUMAN Ribonuclease 3 OS=Homo sapiens GN=RNASEN PE=...    36   0.20 
sp|O43365|HXA3_HUMAN Homeobox protein Hox-A3 OS=Homo sapiens GN=...    36   0.20 
sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophor...    35   0.27 
sp|Q9Z0G8|WIPF3_RAT WAS/WASL-interacting protein family member 3...    35   0.27 
sp|Q08DG7|HXA3_BOVIN Homeobox protein Hox-A3 OS=Bos taurus GN=HO...    35   0.27 
sp|A6NGB9|WIPF3_HUMAN WAS/WASL-interacting protein family member...    35   0.35 
sp|Q84L31|RD23C_ARATH Putative DNA repair protein RAD23-3 OS=Ara...    35   0.45 
sp|O14776|TCRG1_HUMAN Transcription elongation regulator 1 OS=Ho...    34   0.59 
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 OS=Chlamydo...    34   0.59 
sp|Q9S740|AGP19_ARATH Lysine-rich arabinogalactan protein 19 OS=...    34   0.59 
sp|P55194|3BP1_MOUSE SH3 domain-binding protein 1 OS=Mus musculu...    34   0.59 
sp|Q8TB24|RIN3_HUMAN Ras and Rab interactor 3 OS=Homo sapiens GN...    34   0.77 
sp|Q3AZB7|IF2_SYNS9 Translation initiation factor IF-2 OS=Synech...    34   0.77 
sp|P02831|HXA3_MOUSE Homeobox protein Hox-A3 OS=Mus musculus GN=...    34   0.77 
sp|Q75E67|ELOA1_ASHGO Elongin-A OS=Ashbya gossypii GN=ELA1 PE=3 ...    34   0.77 
sp|P04729|GDB1_WHEAT Gamma-gliadin B-I OS=Triticum aestivum PE=2...    33   1.0  
sp|Q7SAM0|BST1_NEUCR GPI inositol-deacylase OS=Neurospora crassa...    33   1.0  
sp|Q873A1|SEC31_NEUCR Protein transport protein sec-31 OS=Neuros...    33   1.3  
sp|Q6NZN1|PPRC1_MOUSE Peroxisome proliferator-activated receptor...    33   1.3  
sp|Q0D519|FH13_ORYSJ Formin-like protein 13 OS=Oryza sativa subs...    33   1.3  
sp|Q8N693|ESX1_HUMAN Homeobox protein ESX1 OS=Homo sapiens GN=ES...    33   1.3  
sp|Q9UU99|YJX4_SCHPO Uncharacterized protein C23B6.04c OS=Schizo...    33   1.7  
sp|Q1ZXI5|Y1558_DICDI Probable serine/threonine-protein kinase D...    33   1.7  
sp|Q8CGF7|TCRG1_MOUSE Transcription elongation regulator 1 OS=Mu...    33   1.7  

>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic
           OS=Spinacia oleracea GN=PSBS PE=1 SV=1
          Length = 274

 Score = 66.2 bits (160), Expect = 1e-10
 Identities = 42/97 (43%), Positives = 50/97 (51%)
 Frame = +1

Query: 274 SQAGGLSFAPLHSSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXX 453
           S    L F+PL SS    S+  KT+ALF                    VED         
Sbjct: 37  SSTSNLFFSPLPSSSSSSSTVFKTLALFKSKAKAPKKVEKPKLK----VEDGLFGTSGGI 92

Query: 454 XXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
              K+NELFVGRVAM+GFAAS+LGE ITGKG L+Q +
Sbjct: 93  GFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLN 129



 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LGFA S++GE ITGKG LAQ +
Sbjct: 200 KSNELFVGRLAQLGFAFSLIGEIITGKGALAQLN 233


>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic
           OS=Nicotiana tabacum GN=PSBS PE=2 SV=1
          Length = 274

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 32/49 (65%), Positives = 35/49 (71%)
 Frame = +1

Query: 418 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLN 128



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum sogarandinum GN=PSBS PE=2 SV=1
          Length = 276

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 32/49 (65%), Positives = 35/49 (71%)
 Frame = +1

Query: 418 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLN 130



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum lycopersicum GN=PSBS PE=3 SV=1
          Length = 276

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 32/49 (65%), Positives = 35/49 (71%)
 Frame = +1

Query: 418 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLN 130



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic
           OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1
          Length = 265

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 30/49 (61%), Positives = 34/49 (69%)
 Frame = +1

Query: 418 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLN 120



 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224


>sp|P51532|SMCA4_HUMAN Probable global transcription activator
           SNF2L4 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
          Length = 1647

 Score = 36.6 bits (83), Expect = 0.12
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 158 PPSASPCLWP--PWLNLPF-SPAPQRSLPPSPISRQAPVLQRRRPAASPSLP 304
           PP   P  WP  P  N    +  PQ+ +PP P  R +P      PAASP +P
Sbjct: 276 PPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMP 327


>sp|Q9NRR4|RNC_HUMAN Ribonuclease 3 OS=Homo sapiens GN=RNASEN PE=1
           SV=2
          Length = 1374

 Score = 35.8 bits (81), Expect = 0.20
 Identities = 22/54 (40%), Positives = 24/54 (44%)
 Frame = +2

Query: 155 LPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVLQRRRPAASPSLPCIPP 316
           LPP      +PP    P  P+ Q  LPP PI    P  Q R P   P  PC PP
Sbjct: 72  LPPRPDFVPFPP----PMPPSAQGPLPPCPIRPPFPNHQMRHPFPVP--PCFPP 119


>sp|O43365|HXA3_HUMAN Homeobox protein Hox-A3 OS=Homo sapiens
           GN=HOXA3 PE=2 SV=1
          Length = 443

 Score = 35.8 bits (81), Expect = 0.20
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = +2

Query: 119 HTYARAHTQTRALPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVLQRRRPAASPS 298
           H  + A  +T + PPS  P L  P    P  P P ++ PP+P   Q P    + PA +P+
Sbjct: 65  HELSEACLRTLSAPPSQPPSLGEP----PLHPPPPQAAPPAP---QPPQPAPQPPAPTPA 117

Query: 299 LPCIP 313
            P  P
Sbjct: 118 APPPP 122


>sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophora
           paradoxa GN=ycf17 PE=3 SV=1
          Length = 49

 Score = 35.4 bits (80), Expect = 0.27
 Identities = 15/23 (65%), Positives = 21/23 (91%)
 Frame = +1

Query: 484 GRVAMLGFAASILGEAITGKGTL 552
           GR+AMLGF A++L E++TG+GTL
Sbjct: 21  GRLAMLGFIAALLTESLTGQGTL 43


>sp|Q9Z0G8|WIPF3_RAT WAS/WASL-interacting protein family member 3
           OS=Rattus norvegicus GN=Wipf3 PE=1 SV=1
          Length = 485

 Score = 35.4 bits (80), Expect = 0.27
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
 Frame = +2

Query: 137 HTQTRALPPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVL----------QRRRPA 286
           H+  R +PP  S    PP    P  P P    PP P+   +P+            +  P+
Sbjct: 160 HSSARPVPPRPSVPAPPPPTTPPPPPPPPPPPPPPPLPPASPIKAPSVSPPVPPTKGNPS 219

Query: 287 ASPS-LPCIPP 316
           A P+ +PC+PP
Sbjct: 220 AVPAPIPCVPP 230
tr_hit_id A9TJ15
Definition tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein OS=Physcomitrella patens subsp. patens
Align length 49
Score (bit) 66.6
E-value 1.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952759|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_P15, 5'
         (656 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein ...    67   1e-09
tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragmen...    66   2e-09
tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert seque...    65   3e-09
tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza...    65   3e-09
tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa compone...    62   4e-08
tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa compone...    62   4e-08
tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantag...    62   4e-08
tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding prote...    62   4e-08
tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossyp...    62   4e-08
tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossyp...    62   4e-08
tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossyp...    62   4e-08
tr|Q6WFB1|Q6WFB1_MAIZE Photosystem II subunit PsbS OS=Zea mays P...    61   5e-08
tr|B6TKD1|B6TKD1_MAIZE Photosystem II 22 kDa protein OS=Zea mays...    61   5e-08
tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative unchar...    61   7e-08
tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza...    61   7e-08
tr|Q259V3|Q259V3_ORYSA B0518A01.1 protein (H0814G11.22 protein) ...    61   7e-08
tr|Q0J8R9|Q0J8R9_ORYSJ Os04g0690800 protein OS=Oryza sativa subs...    61   7e-08
tr|A7NVD7|A7NVD7_VITVI Chromosome chr18 scaffold_1, whole genome...    61   7e-08
tr|A2XZ94|A2XZ94_ORYSI Putative uncharacterized protein OS=Oryza...    61   7e-08
tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Popul...    60   9e-08
tr|A9NYQ2|A9NYQ2_PICSI Putative uncharacterized protein OS=Picea...    59   2e-07
tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein (At1g445...    59   3e-07
tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protei...    59   3e-07
tr|Q3ECX1|Q3ECX1_ARATH Uncharacterized protein At1g44575.2 OS=Ar...    59   3e-07
tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea...    58   4e-07
tr|A8HPM5|A8HPM5_CHLRE Chloroplast photosystem II-associated 22 ...    58   6e-07
tr|A8HPM2|A8HPM2_CHLRE Chloroplast photosystem II-associated 22 ...    58   6e-07
tr|A4QPL3|A4QPL3_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    57   1e-06
tr|A4QPL4|A4QPL4_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    57   1e-06
tr|Q2VL34|Q2VL34_9LILI PSII subunit PsbS (Fragment) OS=Xerophyta...    49   2e-04

>tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein
           OS=Physcomitrella patens subsp. patens GN=PSBS PE=4 SV=1
          Length = 279

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 35/49 (71%), Positives = 36/49 (73%)
 Frame = +1

Query: 418 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           VED            K NELFVGRVAMLGFAASILGEA+TGKGTLAQFD
Sbjct: 85  VEDGIFGTSGGIGFTKANELFVGRVAMLGFAASILGEALTGKGTLAQFD 133



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A +I+GE ITGKG LAQ +
Sbjct: 205 KSNELFVGRLAQLGIAFAIIGEIITGKGALAQLN 238


>tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragment)
           OS=Medicago truncatula PE=2 SV=1
          Length = 262

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 44/93 (47%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
 Frame = +1

Query: 289 LSFAPLHS-SRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXK 465
           +SF PL S S+ F S    T+ALF                    VED            K
Sbjct: 39  VSFNPLPSNSKCFSSRTFTTLALFKSKTKAPAKVVKKPKPK---VEDGIFGTSRGFGFTK 95

Query: 466 QNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           QNELFVGRVAM+GFAASILGEA+TGKG LAQ +
Sbjct: 96  QNELFVGRVAMIGFAASILGEALTGKGILAQLN 128



 Score = 50.1 bits (118), Expect = 1e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LGF  S++GE ITGKG LAQ +
Sbjct: 197 KSNELFVGRLAQLGFVFSLIGEIITGKGALAQLN 230


>tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0039A07.6 PE=2 SV=1
          Length = 268

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/85 (47%), Positives = 46/85 (54%)
 Frame = +1

Query: 310 SSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGR 489
           SS + ++  +KTVALF                     ED            K+NELFVGR
Sbjct: 39  SSSLGRAVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGR 98

Query: 490 VAMLGFAASILGEAITGKGTLAQFD 564
           VAMLGFAASILGEAITGKG LAQ +
Sbjct: 99  VAMLGFAASILGEAITGKGILAQLN 123



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04589 PE=4 SV=1
          Length = 268

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 40/85 (47%), Positives = 46/85 (54%)
 Frame = +1

Query: 310 SSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGR 489
           SS + ++  +KTVALF                     ED            K+NELFVGR
Sbjct: 39  SSSLGRAVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGR 98

Query: 490 VAMLGFAASILGEAITGKGTLAQFD 564
           VAMLGFAASILGEAITGKG LAQ +
Sbjct: 99  VAMLGFAASILGEAITGKGILAQLN 123



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS2 PE=4 SV=1
          Length = 274

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 32/49 (65%), Positives = 35/49 (71%)
 Frame = +1

Query: 418 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLN 128



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS1 PE=2 SV=1
          Length = 277

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 32/49 (65%), Positives = 35/49 (71%)
 Frame = +1

Query: 418 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 83  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLN 131



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 237


>tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantago
           major GN=psbs1 PE=2 SV=1
          Length = 262

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 32/49 (65%), Positives = 35/49 (71%)
 Frame = +1

Query: 418 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 72  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLN 120



 Score = 49.3 bits (116), Expect = 2e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A SI+GE +TGKG LAQ +
Sbjct: 189 KANELFVGRLAQLGIAFSIIGEIVTGKGALAQLN 222


>tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding protein
           (Fragment) OS=Solanum nigrum GN=PsbS PE=4 SV=1
          Length = 268

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 32/49 (65%), Positives = 35/49 (71%)
 Frame = +1

Query: 418 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLN 130



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein
           OS=Gossypioides kirkii PE=4 SV=1
          Length = 277

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 32/49 (65%), Positives = 35/49 (71%)
 Frame = +1

Query: 418 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLN 133



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 237


>tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossypium
           hirsutum PE=4 SV=1
          Length = 278

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 32/49 (65%), Positives = 35/49 (71%)
 Frame = +1

Query: 418 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLN 133



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +1

Query: 463 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 564
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 237