| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952760|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_P16, 5'
(678 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 263 8e-70
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 246 6e-65
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla... 99 2e-20
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 99 3e-20
sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl... 96 2e-19
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl... 94 5e-19
sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl... 93 1e-18
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl... 93 1e-18
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl... 91 7e-18
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 89 3e-17
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 88 5e-17
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 86 1e-16
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas... 86 1e-16
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 86 2e-16
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 86 2e-16
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 85 3e-16
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 85 3e-16
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 85 3e-16
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 85 4e-16
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 84 5e-16
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 84 5e-16
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 84 9e-16
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 83 1e-15
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 83 1e-15
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 83 1e-15
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 83 2e-15
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 82 2e-15
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch... 82 2e-15
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ... 82 3e-15
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 82 3e-15
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21,
chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245
Score = 263 bits (671), Expect = 8e-70
Identities = 130/197 (65%), Positives = 142/197 (72%)
Frame = +2
Query: 86 SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLDGSSPGDFG 265
SA VPSL P +RS G P A+ + R++MSAEW PGQPRPAHLDGSSPGDFG
Sbjct: 11 SAVGVPSLLAPSSRSGRSGLPFC---AYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFG 67
Query: 266 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQAT 445
FDPLGLA VPENFER+KESE+ HCRWAML VPGVL+PEALGLGNWV AQ+WAA P GQAT
Sbjct: 68 FDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQAT 127
Query: 446 YLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXXX 625
YLGNPVPWGNLP QR EKDPEK+KYPGG FDPLGFSK+P
Sbjct: 128 YLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGFSKDPAKFEEL 187
Query: 626 XXXXXXNGRLALLAFVG 676
NGRLA+LAFVG
Sbjct: 188 KLKEIKNGRLAMLAFVG 204
Score = 32.3 bits (72), Expect = 2.4
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 266 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEA 382
FDPLG ++ P FE K E+ + R AMLA G + ++
Sbjct: 172 FDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQS 210
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
Length = 246
Score = 246 bits (629), Expect = 6e-65
Identities = 126/207 (60%), Positives = 146/207 (70%), Gaps = 2/207 (0%)
Frame = +2
Query: 62 MATSTVASSA--QLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAH 235
MA++T+ S + PS L T+SKF + GA T+ SR SMSA+W+PGQPRP++
Sbjct: 1 MASNTLMSCGIPAVCPSF-LSSTKSKFAAAMPVYVGA-TNFMSRFSMSADWMPGQPRPSY 58
Query: 236 LDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQK 415
LDGS+PGDFGFD LGL EVP N ERYKESELIHCRWAMLAVPG+++PEALGLGNWV AQ+
Sbjct: 59 LDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQE 118
Query: 416 WAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGF 595
WAA PGGQATYLG PVPWG LP QR+ EKD EK+KYPGG FDPLG+
Sbjct: 119 WAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGY 178
Query: 596 SKNPXXXXXXXXXXXXNGRLALLAFVG 676
SK+P NGRLALLA VG
Sbjct: 179 SKDPAKFEELKVKEIKNGRLALLAIVG 205
Score = 35.0 bits (79), Expect = 0.36
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 266 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLG 394
FDPLG ++ P FE K E+ + R A+LA+ G + ++ LG
Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLG 215
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 99.0 bits (245), Expect = 2e-20
Identities = 76/226 (33%), Positives = 104/226 (46%), Gaps = 21/226 (9%)
Frame = +2
Query: 62 MATSTVASSAQLVPSLSLPLTRSKFLGSP--------AFTPGAFTSNGSRL--SMSAEWL 211
MAT T +SA + L +S+FLG AF P + + S + EWL
Sbjct: 1 MATVTTQASAAIFGPCGL---KSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWL 57
Query: 212 PGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGL 391
PG P +L GS PGD GFDPLGLAE PEN + ++EL++ RWAML V G+LLPE
Sbjct: 58 PGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTS 117
Query: 392 GNWVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQR--NYEKDPEKRK- 562
++ KW A G+ Y + + + + +DP ++
Sbjct: 118 IGIINVPKWYA--AGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQY 175
Query: 563 --------YPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVG 676
YPGG F+PL F+ NGRLA+LAF+G
Sbjct: 176 SLPAGEVGYPGGIFNPLNFAPT----LEAKEKEIANGRLAMLAFLG 217
>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26,
chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 98.6 bits (244), Expect = 3e-20
Identities = 56/157 (35%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Frame = +2
Query: 227 PAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGL--GNW 400
P +L+G GD+G+DP GL + PENF +Y+ ELIH RWAML G ++PEAL N
Sbjct: 82 PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANC 141
Query: 401 VDAQKWAAT-----PGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKY 565
W T G Y G +P + + D E + +
Sbjct: 142 GPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLH 201
Query: 566 PGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVG 676
PGGPFDPLG +K+P NGRLA+ A +G
Sbjct: 202 PGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLG 238
>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3,
chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=2
SV=1
Length = 276
Score = 95.9 bits (237), Expect = 2e-19
Identities = 67/199 (33%), Positives = 83/199 (41%), Gaps = 43/199 (21%)
Frame = +2
Query: 206 WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPE----------------------------- 298
W PG P LDGS GD GFDP GL + E
Sbjct: 59 WFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESS 118
Query: 299 --------------NFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGG 436
+R++E ELIH RWAML G + EAL W DA K G
Sbjct: 119 EIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEG- 177
Query: 437 QATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXX 616
++YLG P+P+ +L QRN E DPEKR YPGG FDPLG + +P
Sbjct: 178 -SSYLGQPLPF-SLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPLGLAADPEKL 235
Query: 617 XXXXXXXXXNGRLALLAFV 673
+ RLA++AF+
Sbjct: 236 DTLKLAEIKHSRLAMVAFL 254
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
PE=1 SV=1
Length = 231
Score = 94.4 bits (233), Expect = 5e-19
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Frame = +2
Query: 206 WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEAL 385
WLPG PA+LDGS GD GFDPL LAE PE+ + ++++++ RWAML V G+L+PE L
Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVL 95
Query: 386 GLGNWVDAQKWAATPGGQATYLGNPVP--------------WGNLPXXXXXXXXXXXXXX 523
++A +W PG + + + W ++
Sbjct: 96 TKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGSVNQDPIF--- 152
Query: 524 XQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVG 676
++Y P + YPG F+PL F+ NGRLA+LAF+G
Sbjct: 153 --KSYSLPPHECGYPGRVFNPLNFA-----PLENKEKELANGRLAMLAFLG 196
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1,
chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=2
SV=1
Length = 290
Score = 92.8 bits (229), Expect = 1e-18
Identities = 67/201 (33%), Positives = 84/201 (41%), Gaps = 44/201 (21%)
Frame = +2
Query: 206 WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPE----------------------------- 298
W PG P LDGS GD+GFDP GL + E
Sbjct: 58 WYPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAA 117
Query: 299 --------------NFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGG 436
+R++E ELIH RWAMLA G L E L W DA K G
Sbjct: 118 DAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDG- 176
Query: 437 QATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGP-FDPLGFSKNPXX 613
++YLG P+P+ ++ QRN E D EKR YPGG FDPLG + +P
Sbjct: 177 -SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEK 234
Query: 614 XXXXXXXXXXNGRLALLAFVG 676
+ RLA++AF+G
Sbjct: 235 TAQLQLAEIKHARLAMVAFLG 255
Score = 37.4 bits (85), Expect = 0.074
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = +2
Query: 224 RPAHLDGSS---PGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEAL--- 385
R A LD PG FDPLGLA PE + + +E+ H R AM+A G + A
Sbjct: 206 RNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGK 265
Query: 386 -GLGNW 400
L NW
Sbjct: 266 GPLNNW 271
>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
Length = 251
Score = 92.8 bits (229), Expect = 1e-18
Identities = 74/222 (33%), Positives = 101/222 (45%), Gaps = 17/222 (7%)
Frame = +2
Query: 62 MATSTVASSAQLV-PSLSLP--LTRS-----KFLGSPAFTPGAFTSNGSRLSMSAEWLPG 217
MAT T +SA + P S P LT S + L + A TS+ + EWLPG
Sbjct: 1 MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60
Query: 218 QPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEA----- 382
P +L GS GD GFDPLGLAE PEN + + ++EL++ RWAML V G+LLPE
Sbjct: 61 LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120
Query: 383 -LGLGNWVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQ---RNYEKDP 550
+ + W DA K ++ + + + + Y
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180
Query: 551 EKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVG 676
+ YPGG F+PL F+ NGRLA+LAF+G
Sbjct: 181 GEVGYPGGIFNPLNFAPT----QEAKEKELANGRLAMLAFLG 218
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 90.5 bits (223), Expect = 7e-18
Identities = 72/231 (31%), Positives = 99/231 (42%), Gaps = 27/231 (11%)
Frame = +2
Query: 65 ATSTVASSAQLVPSLS-----LPLTRSKFLGSPAFTPGAFTSNGSRLSMSAE-------- 205
A+ST+A+ A PS + T++ FLG +++ + S +
Sbjct: 6 ASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDR 65
Query: 206 --WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPE 379
W PG P LDGS PGDFGFDPLGLA PE+ +++EL+HCRWAML G+ +PE
Sbjct: 66 PLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPE 125
Query: 380 ALGLGNWVDAQKWAATPGGQATYLGNP---------VPWG-NLPXXXXXXXXXXXXXXXQ 529
L ++ W T G Q + + W
Sbjct: 126 LLTKIGILNTPSW-YTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIF 184
Query: 530 RNYEKDPEKRKYPGGP-FDPLGF-SKNPXXXXXXXXXXXXNGRLALLAFVG 676
N + YPGG FDPLG+ S +P NGRLA+LA +G
Sbjct: 185 PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMG 235
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 88.6 bits (218), Expect = 3e-17
Identities = 71/230 (30%), Positives = 94/230 (40%), Gaps = 26/230 (11%)
Frame = +2
Query: 65 ATSTVASSAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEW-----------L 211
AT+ SS+ L S +G + ++S S+ W L
Sbjct: 3 ATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPL 62
Query: 212 PGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEAL-- 385
G+P P++L G PGD+G+D GL+ PE F + +E E+IHCRWAML G + PE L
Sbjct: 63 SGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 121
Query: 386 -----GLGNWVDAQKWAATPGGQATYLGNP--VPWGNLPXXXXXXXXXXXXXXXQR---- 532
G W A + GG YLGNP V +L R
Sbjct: 122 NGVKFGEAGWFKAGSQIFSDGG-LDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGG 180
Query: 533 --NYEKDPEKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVG 676
DP YPGG FDPLG ++ P NGRLA+ + G
Sbjct: 181 PLGEIVDP---LYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFG 227
Score = 34.3 bits (77), Expect = 0.62
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 209 LPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEAL- 385
+ G P +D PG FDPLGLAE P+ F K E+ + R AM ++ G + +
Sbjct: 177 IAGGPLGEIVDPLYPGG-SFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVT 235
Query: 386 GLGNWVDAQKWAATPGGQATYL 451
G G D A P +L
Sbjct: 236 GKGPLEDLADHIADPVNNNAWL 257
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952760|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_P16, 5'
(678 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza ... 262 2e-68
tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subs... 262 2e-68
tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea... 260 5e-68
tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza... 259 8e-68
tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding prote... 259 1e-67
tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea... 257 5e-67
tr|A9NRY9|A9NRY9_PICSI Putative uncharacterized protein OS=Picea... 257 5e-67
tr|Q40512|Q40512_TOBAC Photosystem I light-harvesting chlorophyl... 256 7e-67
tr|B7FH03|B7FH03_MEDTR Putative uncharacterized protein OS=Medic... 256 9e-67
tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea... 256 1e-66
tr|Q9C5R7|Q9C5R7_ARATH AT3g54890 OS=Arabidopsis thaliana GN=AT3g... 254 3e-66
tr|Q01667|Q01667_ARATH AT3g54890 (Chlorophyll A/B-binding protei... 254 5e-66
tr|A9P266|A9P266_PICSI Putative uncharacterized protein OS=Picea... 253 6e-66
tr|A9PJ58|A9PJ58_POPJC Putative uncharacterized protein OS=Popul... 253 8e-66
tr|A5AE63|A5AE63_VITVI Putative uncharacterized protein OS=Vitis... 252 1e-65
tr|A9T399|A9T399_PHYPA Predicted protein OS=Physcomitrella paten... 249 9e-65
tr|Q02069|Q02069_PINSY Type 1 chlorophyll a /b-binding protein O... 249 1e-64
tr|Q7DM40|Q7DM40_PINSY Type 1 chlorophyll a /b-binding protein (... 248 2e-64
tr|A9T3X6|A9T3X6_PHYPA Predicted protein OS=Physcomitrella paten... 240 7e-62
tr|A8MS75|A8MS75_ARATH Uncharacterized protein At3g54890.4 OS=Ar... 239 2e-61
tr|A9TJX6|A9TJX6_PHYPA Predicted protein OS=Physcomitrella paten... 234 4e-60
tr|Q9M539|Q9M539_9LAMI Chlorophyll a/b-binding protein type I (F... 212 2e-53
tr|Q14K86|Q14K86_PLAAC Chlorophyll a/b-binding protein, photosys... 201 5e-50
tr|Q6V8T3|Q6V8T3_MALDO Chlorophyll a/b-binding protein type I (F... 199 1e-49
tr|Q3EAJ6|Q3EAJ6_ARATH Uncharacterized protein At3g54890.3 OS=Ar... 196 1e-48
tr|Q3E725|Q3E725_ARATH Uncharacterized protein At3g54890.2 OS=Ar... 196 1e-48
tr|A2SY12|A2SY12_MESVI Light-harvesting chlorophyll-a/b binding ... 153 1e-35
tr|Q9FVE3|Q9FVE3_CHLRE Chlorophyll A-B binding protein of LHCI O... 134 4e-30
tr|Q7DM26|Q7DM26_CHLRE Light harvesting complex protein I-20 OS=... 134 7e-30
tr|Q05093|Q05093_CHLRE Light harvesting complex I protein (Light... 134 7e-30
>tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza
sativa GN=Cab26 PE=2 SV=1
Length = 241
Score = 262 bits (669), Expect = 2e-68
Identities = 135/206 (65%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +2
Query: 62 MATSTVAS-SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHL 238
MATS + S SA VPSL P + L A+ T++G R++MSAEW+PGQPRPAHL
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA----TTSG-RVTMSAEWMPGQPRPAHL 55
Query: 239 DGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKW 418
DGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+W
Sbjct: 56 DGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEW 115
Query: 419 AATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFS 598
AA PGGQATYLGNPVPWG LP QR EKDPEK+KYPGG FDPLGFS
Sbjct: 116 AAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFS 175
Query: 599 KNPXXXXXXXXXXXXNGRLALLAFVG 676
K+P NGRLA+LAFVG
Sbjct: 176 KDPVKFEEYKLKEIKNGRLAMLAFVG 201
Score = 35.0 bits (79), Expect = 4.4
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 266 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEA 382
FDPLG ++ P FE YK E+ + R AMLA G + ++
Sbjct: 169 FDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQS 207
>tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subsp.
japonica GN=P0578B12.4 PE=2 SV=1
Length = 241
Score = 262 bits (669), Expect = 2e-68
Identities = 135/206 (65%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +2
Query: 62 MATSTVAS-SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHL 238
MATS + S SA VPSL P + L A+ T++G R++MSAEW+PGQPRPAHL
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA----TTSG-RVTMSAEWMPGQPRPAHL 55
Query: 239 DGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKW 418
DGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+W
Sbjct: 56 DGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEW 115
Query: 419 AATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFS 598
AA PGGQATYLGNPVPWG LP QR EKDPEK+KYPGG FDPLGFS
Sbjct: 116 AAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFS 175
Query: 599 KNPXXXXXXXXXXXXNGRLALLAFVG 676
K+P NGRLA+LAFVG
Sbjct: 176 KDPVKFEEYKLKEIKNGRLAMLAFVG 201
Score = 35.0 bits (79), Expect = 4.4
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 266 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEA 382
FDPLG ++ P FE YK E+ + R AMLA G + ++
Sbjct: 169 FDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQS 207
>tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea
mays PE=2 SV=1
Length = 245
Score = 260 bits (665), Expect = 5e-68
Identities = 135/208 (64%), Positives = 150/208 (72%), Gaps = 2/208 (0%)
Frame = +2
Query: 59 VMATSTV--ASSAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPA 232
VMA+S+ + SA VPSL P +RS L F A TS R++MSAEW+PGQPRPA
Sbjct: 2 VMASSSGLRSCSAVGVPSLLAPSSRSGRLAP--FCANATTSG--RVTMSAEWMPGQPRPA 57
Query: 233 HLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQ 412
HLDGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ
Sbjct: 58 HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEALGLGNWVKAQ 117
Query: 413 KWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLG 592
+WAA PGGQATYLG PVPWG LP QR EKDPEK+KYPGG FDPLG
Sbjct: 118 EWAAVPGGQATYLGAPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLG 177
Query: 593 FSKNPXXXXXXXXXXXXNGRLALLAFVG 676
FSK+P NGRLA+LAFVG
Sbjct: 178 FSKDPAKFEEYKLKEIKNGRLAMLAFVG 205
Score = 35.4 bits (80), Expect = 3.3
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 266 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEA 382
FDPLG ++ P FE YK E+ + R AMLA G + ++
Sbjct: 173 FDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQS 211
>tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_22755 PE=4 SV=1
Length = 241
Score = 259 bits (663), Expect = 8e-68
Identities = 134/205 (65%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Frame = +2
Query: 62 MATSTVAS-SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHL 238
MATS + S SA VPSL P + L A+ T++G R++MSAEW+PGQPRPAHL
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA----TTSG-RVTMSAEWMPGQPRPAHL 55
Query: 239 DGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKW 418
DGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+W
Sbjct: 56 DGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEW 115
Query: 419 AATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFS 598
AA PGGQATYLGNPVPWG LP QR EKDPEK+KYPGG FDPLGFS
Sbjct: 116 AAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFS 175
Query: 599 KNPXXXXXXXXXXXXNGRLALLAFV 673
K+P NGRLA+LAFV
Sbjct: 176 KDPVKFEEYKLKEIKNGRLAMLAFV 200
>tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding protein
OS=Phyllostachys edulis GN=Lhca1 PE=2 SV=1
Length = 246
Score = 259 bits (661), Expect = 1e-67
Identities = 128/197 (64%), Positives = 140/197 (71%)
Frame = +2
Query: 86 SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLDGSSPGDFG 265
SA VPSL P +RS G P A+ + R++MSAEW PGQPRPAHLDGSSPGDFG
Sbjct: 13 SAVGVPSLLAPSSRSGRSGLPFC---AYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFG 69
Query: 266 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQAT 445
FDPLGL VPENFER+KESE+ HCRWAML VPGVL+PEALGLGNWV AQ+WAA PGGQAT
Sbjct: 70 FDPLGLGTVPENFERFKESEVYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAAVPGGQAT 129
Query: 446 YLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXXX 625
Y G PVPWGNLP QR EKDPEK+KYPGG FDPLGFSK+P
Sbjct: 130 YFGVPVPWGNLPTILAIEFLAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFSKDPVKLEEY 189
Query: 626 XXXXXXNGRLALLAFVG 676
NGRLA+LAFVG
Sbjct: 190 KLKEIKNGRLAMLAFVG 206
>tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea
mays PE=2 SV=1
Length = 249
Score = 257 bits (656), Expect = 5e-67
Identities = 131/198 (66%), Positives = 142/198 (71%), Gaps = 1/198 (0%)
Frame = +2
Query: 86 SAQLVPSLSLPLTRSKFL-GSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLDGSSPGDF 262
SA VPSL P T S G F A TS R++MSAEW+PGQPRPAHLDGSSPGDF
Sbjct: 14 SALGVPSLLAPSTSSSSRSGRLPFCAHATTSG--RVTMSAEWMPGQPRPAHLDGSSPGDF 71
Query: 263 GFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQA 442
GFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+WAA PGGQA
Sbjct: 72 GFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVKAQEWAAVPGGQA 131
Query: 443 TYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXX 622
TYLG PVPWG LP QR EKDPEK+KYPGG FDPLGFS++P
Sbjct: 132 TYLGAPVPWGTLPTILAVEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFSRDPAKLEE 191
Query: 623 XXXXXXXNGRLALLAFVG 676
NGRLA+LAFVG
Sbjct: 192 YKLKEIKNGRLAMLAFVG 209
>tr|A9NRY9|A9NRY9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247
Score = 257 bits (656), Expect = 5e-67
Identities = 127/184 (69%), Positives = 136/184 (73%)
Frame = +2
Query: 125 RSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENF 304
+S+F SP + NGSR+SMSAEW+PGQPRPAHLDGS+PGDFGFDPLGL VPEN
Sbjct: 24 KSRFF-SPTNSLSLGVCNGSRVSMSAEWMPGQPRPAHLDGSAPGDFGFDPLGLGVVPENL 82
Query: 305 ERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQATYLGNPVPWGNLPX 484
ERYKESELIHCRWAMLAVPGVL+PEALGLGNWV+AQKWAA PGGQATYLG PVPWG P
Sbjct: 83 ERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQKWAAIPGGQATYLGVPVPWGYFPI 142
Query: 485 XXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALL 664
QRN E D EKRKYPGG FDPLGFSK+P NGRLALL
Sbjct: 143 ILSIFFLKMAFAESQRNGEPDLEKRKYPGGAFDPLGFSKDPAKFEEYKVKEIKNGRLALL 202
Query: 665 AFVG 676
AFVG
Sbjct: 203 AFVG 206
>tr|Q40512|Q40512_TOBAC Photosystem I light-harvesting chlorophyll
a/b-binding protein OS=Nicotiana tabacum GN=LHCI PE=2
SV=1
Length = 245
Score = 256 bits (655), Expect = 7e-67
Identities = 131/207 (63%), Positives = 149/207 (71%), Gaps = 2/207 (0%)
Frame = +2
Query: 62 MATSTVASS--AQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAH 235
MA++T+ S A + PS+ L + SKF + GA + N SR SMSAEW+PGQPRP +
Sbjct: 1 MASNTLMSCGIAAVSPSV-LSSSYSKFAVAVPVCVGAVSGN-SRFSMSAEWMPGQPRPPY 58
Query: 236 LDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQK 415
LDGS+PGDFGFDPLGL EVP N ERYKESELIHCRWAMLAVPG+L+PEALGLGNWV AQ+
Sbjct: 59 LDGSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 118
Query: 416 WAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGF 595
WAA PGGQATYLG PVPWG LP QR+ EKDPEK+KYPGG FDPLG+
Sbjct: 119 WAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 178
Query: 596 SKNPXXXXXXXXXXXXNGRLALLAFVG 676
SK+P NGRLALLAFVG
Sbjct: 179 SKDPKKFEELKVKEIKNGRLALLAFVG 205
>tr|B7FH03|B7FH03_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 282
Score = 256 bits (654), Expect = 9e-67
Identities = 128/206 (62%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Frame = +2
Query: 62 MATSTVASSA-QLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHL 238
MA +T+ SSA PSL L ++S+F S A T+ SR +M+++W+PGQPRP++L
Sbjct: 1 MACNTLMSSAISAFPSL-LSSSKSRFSTSLPLPCTASTNASSRFTMTSDWMPGQPRPSYL 59
Query: 239 DGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKW 418
DGS+PGDFGFDPL L EVPEN ER+KESELIHCRWAMLAVPG+L+PEALGLGNWV AQ+W
Sbjct: 60 DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 119
Query: 419 AATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFS 598
AA PGGQATYLGNPVPWG LP QR+ EKDPEK+KYPGG FDPLG+S
Sbjct: 120 AALPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 179
Query: 599 KNPXXXXXXXXXXXXNGRLALLAFVG 676
K+P NGRLALLAFVG
Sbjct: 180 KDPKKFHEYKIKEVKNGRLALLAFVG 205
Score = 34.3 bits (77), Expect = 7.4
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 266 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPE 379
FDPLG ++ P+ F YK E+ + R A+LA G+++ +
Sbjct: 173 FDPLGYSKDPKKFHEYKIKEVKNGRLALLAFVGIVVQQ 210
>tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247
Score = 256 bits (653), Expect = 1e-66
Identities = 132/207 (63%), Positives = 145/207 (70%), Gaps = 2/207 (0%)
Frame = +2
Query: 62 MATSTVASS--AQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAH 235
MAT+ S A +V + + +S+F SP + NGSR+SMSAEW+PGQPRP H
Sbjct: 1 MATAVGCSHVVAPVVFAGAFSSAKSRFF-SPTNSLSLGVCNGSRVSMSAEWMPGQPRPPH 59
Query: 236 LDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQK 415
LDGS+PGDFGFDPL L VPEN ERYKESELIHCRWAMLAVPGVL+PEALGLGNWV+AQK
Sbjct: 60 LDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQK 119
Query: 416 WAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGF 595
WAA PG QATYLG PVPWG LP QRN E DPEKRKYPGG FDPLGF
Sbjct: 120 WAAIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQRNGEPDPEKRKYPGGAFDPLGF 179
Query: 596 SKNPXXXXXXXXXXXXNGRLALLAFVG 676
SK+P NGRLALLAFVG
Sbjct: 180 SKDPAKFKEYKVKEIKNGRLALLAFVG 206
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