DK952762 |
Clone id |
TST38A01NGRL0014_P18 |
Library |
TST38 |
Length |
573 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_P18. 5' end sequence. |
Accession |
DK952762 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL42Contig1 |
Sequence |
GCTCTTCTGACCGTTTAGGGTTTCGCTACTGCTGTTAGGGTTTCTCCACGTGCCATCGTG ATTTAGTTCGAGCTACCGTAATTCGGTCTTGTAGATCACTACAGAATTTCCGTATCGACG CGAGGTTTTGGGACACAGCAGATCTCTCTCGTTCTACTTCAGATCTGTGTCCAGGAGCTA AGCGAGCTCAGGATTGATGGAGAATATTTATTCTTTCTGGAGTCTAAATGACAATAATCG GCGCTCTCCCACTGAGATGCAAGAGGATCAAAGCTGGAAAGTAGCAGCTACCAAGCTTGC TTTTGCGGATCAGATGAGGCTGAAGTTTGATAGGTCTAGATCTGATGCGAAGGTTGTGGC CCCTCATGAGAAGAACATTAAACAAGCAAAGGGACGATCCAAGGGCAGAGCTGAAGACAT GCTGAAGGGGGAAGGTTTCAACCAGAAGTTTTCGGATGGGGATTTGAGATATGGAGATTT GGGTCAGAAGCTTGGAGCAGGTAACATGTCAACATCACAGATTGTTGGCAGTGCAGATAA ACGATTCAAGTCTCTTCCGCCTGCTGAAACACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q15UD3 |
Definition |
sp|Q15UD3|DNAK_PSEA6 Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) |
Align length |
99 |
Score (bit) |
32.0 |
E-value |
2.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQZ7 |
Definition |
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
145 |
Score (bit) |
57.4 |
E-value |
6.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952762|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_P18, 5' (573 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea... 57 6e-07 tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea... 45 0.004 tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solan... 42 0.024 tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medic... 42 0.024 tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citru... 40 0.070 tr|Q8G712|Q8G712_BIFLO Putative uncharacterized protein OS=Bifid... 36 1.7 tr|B3DU84|B3DU84_BIFLD Subtilisin-like serine protease OS=Bifido... 36 1.7 tr|Q3T552|Q3T552_BIFLO Endo-alpha-N-acetylgalactosaminidase OS=B... 36 1.7 tr|B2C4I9|B2C4I9_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7 tr|B2C4I3|B2C4I3_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7 tr|B2C4I2|B2C4I2_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7 tr|B2C4I1|B2C4I1_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7 tr|B2C4I0|B2C4I0_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7 tr|B2C4H8|B2C4H8_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7 tr|B2C4H7|B2C4H7_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7 tr|B2C4H6|B2C4H6_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7 tr|Q3J402|Q3J402_RHOS4 Rod shape-determining protein MreC OS=Rho... 35 3.9 tr|A3PIE7|A3PIE7_RHOS1 Rod shape-determining protein MreC OS=Rho... 35 3.9 tr|Q70AN6|Q70AN6_RHOSH MreC protein OS=Rhodobacter sphaeroides G... 35 3.9 tr|A4WSY0|A4WSY0_RHOS5 Rod shape-determining protein MreC OS=Rho... 34 5.0 tr|Q231A2|Q231A2_TETTH Protein kinase domain containing protein ... 34 5.0
>tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 282
Score = 57.4 bits (137), Expect = 6e-07 Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 21/145 (14%) Frame = +2
Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376 M N YSFW + R +D W +AA++LA A+ R K DR+ +P E Sbjct: 1 MANPYSFWQFGEE-LRGQARASDDHKWTLAASQLALAEHKRSKGDRTNRSEPTESPSEA- 58
Query: 377 IKQAKGRSKGRAE-DMLKGEGFNQKFSDGDLRYGDLGQKLGA------------------ 499 + KG+ KG++E L+ N K + D + GD G K GA Sbjct: 59 --KQKGKYKGKSEVSKLEALTLNLKQMNLDWKPGDAGVKGGALNDIYNASTPYHNNNSGN 116
Query: 500 --GNMSTSQIVGSADKRFKSLPPAE 568 N + S + DKRFK+LP E Sbjct: 117 NNNNNNGSNNNNAYDKRFKTLPSTE 141
>tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 273
Score = 44.7 bits (104), Expect = 0.004 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 14/138 (10%) Frame = +2
Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376 M + ++FW L ++ R +E DQ+W +AA+KLA +Q R K DR S + E Sbjct: 1 MVDSFAFWQLGESLRGLSSE---DQNWTLAASKLATFEQTRGKSDRINSLEPKTSYAE-- 55
Query: 377 IKQAKGRSKGRAEDMLKGEGFN--QKFSDGDLRYG------DLGQKLGAGNMSTSQ---- 520 +K G+S G+ E++ + FN K ++ + G ++ + N +TS Sbjct: 56 VKHRGGKSNGKLEEVNDNQ-FNLIWKPAEAGTKVGIVHGGYNINHVINYNNNNTSSNGNN 114
Query: 521 --IVGSADKRFKSLPPAE 568 S +KRFK+LP +E Sbjct: 115 NYNNNSFEKRFKTLPSSE 132
>tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 298
Score = 42.0 bits (97), Expect = 0.024 Identities = 42/162 (25%), Positives = 62/162 (38%), Gaps = 37/162 (22%) Frame = +2
Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLA----FADQMRLKFDRSRSDAKVVAP 364 MEN+ S+W D R ++ ED W AA KL+ + + R D S+S A+ + P Sbjct: 1 MENMQSYWQFGD-ELRGQSKASEDHKWSTAALKLSEQMKYKGERRNNLDLSKSSAE-IRP 58
Query: 365 HEKNI-------------------KQAKGRSKGRAEDML--------------KGEGFNQ 445 ++ K + SK R D + G Sbjct: 59 RGNHMFQEDNKWESLNFNMLNLESKMTENMSKNRIMDSIYNANPVYLNPNFNSLGNSSLS 118
Query: 446 KFSDGDLRYGDLGQKLGAGNMSTSQIVGSADKRFKSLPPAET 571 KF+ + Y K N+ ++ S DKRFK+LP AET Sbjct: 119 KFNASN--YTKEPSKNNNNNVESTNGNNSVDKRFKTLPAAET 158
>tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 302
Score = 42.0 bits (97), Expect = 0.024 Identities = 45/164 (27%), Positives = 64/164 (39%), Gaps = 39/164 (23%) Frame = +2
Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376 M+N++SFW L D R ++ ED W + A+KLA + R K +R + P E Sbjct: 1 MDNMHSFWQLGDE-LRGHSKASEDHKWLMVASKLA---EQRSKAERFNNLDLSKGPLETR 56
Query: 377 IKQAKGRSKGRAEDMLK------GEGFNQKFSDGDLRYGDLG-----QKLG---AGNMST 514 + G + D L F + S LR G QK AGNM++ Sbjct: 57 PRDKFGFQEENKFDTLNLSMLNLDSKFTENMSKSSLRNGVYNMNAVYQKSNVNFAGNMNS 116
Query: 515 SQIVGSA-------------------------DKRFKSLPPAET 571 ++ G+ DKRFK+LP AET Sbjct: 117 NKYSGNVQLNKDPHNNNSNNNNNNNENNSNATDKRFKTLPAAET 160
>tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citrus paradisi PE=2 SV=1 Length = 305
Score = 40.4 bits (93), Expect = 0.070 Identities = 48/177 (27%), Positives = 67/177 (37%), Gaps = 52/177 (29%) Frame = +2
Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376 M+N++SFW L D R + EDQSW AA++L A+Q R K +R N Sbjct: 1 MDNMHSFWQLGD-ELRGQSRTSEDQSWLRAASRL--AEQTRFKGERM-----------NN 46
Query: 377 IKQAKGRSKGRAEDML------KGEGFNQKF-------------SDGDLRYG-------- 475 + +KG ++ R D + E FN F + LR G Sbjct: 47 LDLSKGMTEIRPRDKIMYHEDNNFESFNFNFNMMNLDNKVVENVTKSSLRNGIYNMNAVY 106
Query: 476 ------DLG----QKLGAGNMST---------------SQIVGSADKRFKSLPPAET 571 ++G K G N+S S + DKRFK+LP ET Sbjct: 107 QKNSGHNMGNLMVNKYGGNNLSVKEAENNNNNNNNNNDSNANSALDKRFKTLPATET 163
>tr|Q8G712|Q8G712_BIFLO Putative uncharacterized protein OS=Bifidobacterium longum GN=BL0464 PE=4 SV=1 Length = 1966
Score = 35.8 bits (81), Expect = 1.7 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Frame = +2
Query: 233 NNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRA 412 NN E+ E +W++A + F Q + F + + K VA + + Q+ Sbjct: 622 NNPYKSEEVPELVAWRIA---MNFGSQAQNPFLTTLDNVKKVALNTDGLGQSV------- 671
Query: 413 EDMLKGEGFNQKFSDGDLRYGDLGQKL-GAGNMSTSQIVGS 532 +LKG G N+ G YGD+GQ+L GA +M+T GS Sbjct: 672 --LLKGYG-NEGHDSGHPDYGDIGQRLGGADDMNTMMEEGS 709
>tr|B3DU84|B3DU84_BIFLD Subtilisin-like serine protease OS=Bifidobacterium longum (strain DJO10A) GN=aprE PE=4 SV=1 Length = 1937
Score = 35.8 bits (81), Expect = 1.7 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Frame = +2
Query: 233 NNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRA 412 NN E+ E +W++A + F Q + F + + K VA + + Q+ Sbjct: 593 NNPYKSEEVPELVAWRIA---MNFGSQAQNPFLTTLDNVKKVALNTDGLGQSV------- 642
Query: 413 EDMLKGEGFNQKFSDGDLRYGDLGQKL-GAGNMSTSQIVGS 532 +LKG G N+ G YGD+GQ+L GA +M+T GS Sbjct: 643 --LLKGYG-NEGHDSGHPDYGDIGQRLGGADDMNTMMEEGS 680
>tr|Q3T552|Q3T552_BIFLO Endo-alpha-N-acetylgalactosaminidase OS=Bifidobacterium longum subsp. longum JCM 1217 GN=engBF PE=4 SV=1 Length = 1966
Score = 35.8 bits (81), Expect = 1.7 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Frame = +2
Query: 233 NNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRA 412 NN E+ E +W++A + F Q + F + + K VA + + Q+ Sbjct: 622 NNPYKSEEVPELVAWRIA---MNFGSQAQNPFLTTLDNVKKVALNTDGLGQSV------- 671
Query: 413 EDMLKGEGFNQKFSDGDLRYGDLGQKL-GAGNMSTSQIVGS 532 +LKG G N+ G YGD+GQ+L GA +M+T GS Sbjct: 672 --LLKGYG-NEGHDSGHPDYGDIGQRLGGADDMNTMMEEGS 709
>tr|B2C4I9|B2C4I9_BIFLO EngBF (Fragment) OS=Bifidobacterium longum PE=4 SV=1 Length = 291
Score = 35.8 bits (81), Expect = 1.7 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Frame = +2
Query: 233 NNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRA 412 NN E+ E +W++A + F Q + F + + K VA + + Q+ Sbjct: 8 NNPYKSEEVPELVAWRIA---MNFGSQAQNPFLTTLDNVKKVALNTDGLGQSV------- 57
Query: 413 EDMLKGEGFNQKFSDGDLRYGDLGQKL-GAGNMSTSQIVGS 532 +LKG G N+ G YGD+GQ+L GA +M+T GS Sbjct: 58 --LLKGYG-NEGHDSGHPDYGDIGQRLGGADDMNTMMEEGS 95
>tr|B2C4I3|B2C4I3_BIFLO EngBF (Fragment) OS=Bifidobacterium longum PE=4 SV=1 Length = 289
Score = 35.8 bits (81), Expect = 1.7 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Frame = +2
Query: 233 NNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRA 412 NN E+ E +W++A + F Q + F + + K VA + + Q+ Sbjct: 6 NNPYKSEEVPELVAWRIA---MNFGSQAQNPFLTTLDNVKKVALNTDGLGQSV------- 55
Query: 413 EDMLKGEGFNQKFSDGDLRYGDLGQKL-GAGNMSTSQIVGS 532 +LKG G N+ G YGD+GQ+L GA +M+T GS Sbjct: 56 --LLKGYG-NEGHDSGHPDYGDIGQRLGGADDMNTMMEEGS 93
|