DK952762
Clone id TST38A01NGRL0014_P18
Library
Length 573
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_P18. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GCTCTTCTGACCGTTTAGGGTTTCGCTACTGCTGTTAGGGTTTCTCCACGTGCCATCGTG
ATTTAGTTCGAGCTACCGTAATTCGGTCTTGTAGATCACTACAGAATTTCCGTATCGACG
CGAGGTTTTGGGACACAGCAGATCTCTCTCGTTCTACTTCAGATCTGTGTCCAGGAGCTA
AGCGAGCTCAGGATTGATGGAGAATATTTATTCTTTCTGGAGTCTAAATGACAATAATCG
GCGCTCTCCCACTGAGATGCAAGAGGATCAAAGCTGGAAAGTAGCAGCTACCAAGCTTGC
TTTTGCGGATCAGATGAGGCTGAAGTTTGATAGGTCTAGATCTGATGCGAAGGTTGTGGC
CCCTCATGAGAAGAACATTAAACAAGCAAAGGGACGATCCAAGGGCAGAGCTGAAGACAT
GCTGAAGGGGGAAGGTTTCAACCAGAAGTTTTCGGATGGGGATTTGAGATATGGAGATTT
GGGTCAGAAGCTTGGAGCAGGTAACATGTCAACATCACAGATTGTTGGCAGTGCAGATAA
ACGATTCAAGTCTCTTCCGCCTGCTGAAACACT
■■Homology search results ■■ -
sp_hit_id Q15UD3
Definition sp|Q15UD3|DNAK_PSEA6 Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Align length 99
Score (bit) 32.0
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952762|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_P18, 5'
(573 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q15UD3|DNAK_PSEA6 Chaperone protein dnaK OS=Pseudoalteromonas... 32 2.2
sp|Q12153|SSF2_YEAST Ribosome biogenesis protein SSF2 OS=Sacchar... 32 2.9
sp|Q9TW28|MYOM_DICDI Myosin-M heavy chain OS=Dictyostelium disco... 32 2.9
sp|P35806|FLGE_CAUCR Flagellar hook protein flgE OS=Caulobacter ... 31 3.8
sp|Q54S59|WDR61_DICDI WD repeat-containing protein 61 homolog OS... 30 6.5
sp|Q9UHP6|RTDR1_HUMAN Rhabdoid tumor deletion region protein 1 O... 30 8.5

>sp|Q15UD3|DNAK_PSEA6 Chaperone protein dnaK OS=Pseudoalteromonas
atlantica (strain T6c / BAA-1087) GN=dnaK PE=2 SV=1
Length = 639

Score = 32.0 bits (71), Expect = 2.2
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Frame = +2

Query: 239 RRSPTEMQE-DQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRAE 415
R+ P MQ ++ + A +L+ A Q + +DA P IK + + + E
Sbjct: 253 RKDPLAMQRLKEAGEKAKIELSSAQQTEVNLPYITADAS--GPKHLTIKLTRAKLESLVE 310

Query: 416 DMLKG--EGFNQKFSDGDLRYGDLGQKLGAGNMSTSQIV 526
M+K E Q +D DL GD+ + G + +V
Sbjct: 311 KMVKATLEPLKQALADADLSVGDINDIILVGGQTRMPLV 349


>sp|Q12153|SSF2_YEAST Ribosome biogenesis protein SSF2
OS=Saccharomyces cerevisiae GN=SSF2 PE=1 SV=1
Length = 453

Score = 31.6 bits (70), Expect = 2.9
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Frame = +2

Query: 254 EMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKG-----RSKGRAED 418
E + S ++ A + A +MRLK R + + +A +K +K AK R K RAE+
Sbjct: 355 EFVQKSSEEIKALEKRHAAKMRLKEQRRKEQEENIAK-KKAVKDAKKQRKLERRKARAEE 413

Query: 419 MLKGEGFNQKFSDG------DLRYGDLGQKL 493
+G+G + SD D Y D+ + L
Sbjct: 414 QGEGQGKDGAMSDDGSSSSEDEHYSDVPEDL 444


>sp|Q9TW28|MYOM_DICDI Myosin-M heavy chain OS=Dictyostelium discoideum
GN=myoM PE=1 SV=1
Length = 1737

Score = 31.6 bits (70), Expect = 2.9
Identities = 19/100 (19%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = +2

Query: 71 SYRNSVL*ITTEFPYRREVLGHSRSLSFYFRSVSRS*ASSGLMENIYSFWSLNDNNRRSP 250
SYR + +F R + +S ++ +++ S ++EN+ S + N+NN+ +
Sbjct: 795 SYRRDFI----QFYSRYNCILNSLNIKINLTNINHSNLCKEILENVNSQYKNNNNNKNNN 850

Query: 251 TEM-----QEDQSWKVAATKLAFADQMRLKFDRSRSDAKV 355
++ ++++ TK+ +D++ + ++ R D+ V
Sbjct: 851 NQIVKITTNSKPTFQIGKTKIFISDELYIYLEKKRYDSLV 890


>sp|P35806|FLGE_CAUCR Flagellar hook protein flgE OS=Caulobacter
crescentus GN=flgE PE=3 SV=2
Length = 591

Score = 31.2 bits (69), Expect = 3.8
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2

Query: 329 DRSRSDAKVVAPH---EKNIKQAKGRSKGRAEDMLKGEGFNQKFSDGDLRYGDLGQKLGA 499
D ++ ++K V P + + +KG + MLKG G NQ +++ + GDL G
Sbjct: 318 DYAKDNSKGVKPDFEVQIPLSDSKGGQRTVTLSMLKGPGPNQWYAELRAKPGDLANN-GN 376

Query: 500 GNMSTSQIVGSADKRFKS 553
G +ST I + D + K+
Sbjct: 377 GQISTGIIEFTTDGKLKN 394


>sp|Q54S59|WDR61_DICDI WD repeat-containing protein 61 homolog
OS=Dictyostelium discoideum GN=wdr61 PE=4 SV=1
Length = 299

Score = 30.4 bits (67), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +2

Query: 110 PYRREVLGHSRSLSFYFRSVSRS*----ASSGLMENIYSFWSLNDNNRRSPTEMQEDQSW 277
PY +LGHS SF F V+ S ASSG ++ W + S DQ+W
Sbjct: 216 PYIASLLGHS---SFIFSLVASSNGDLLASSGSIDRKVCIWDIKTRKLDSSFTAHADQTW 272

Query: 278 KVA 286
+A
Sbjct: 273 DLA 275


>sp|Q9UHP6|RTDR1_HUMAN Rhabdoid tumor deletion region protein 1
OS=Homo sapiens GN=RTDR1 PE=2 SV=1
Length = 348

Score = 30.0 bits (66), Expect = 8.5
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = -3

Query: 481 QISISQIPIRKLLVETFPL--QHVFSSALGSS--LCLFNVLLMRGHNLRIRSRPIKLQPH 314
Q+ + + ++ +++T L Q + ALGS+ L L LL N+R ++ L
Sbjct: 159 QVEVEEEEFQEFILDTLVLCLQEDATEALGSNVVLVLKQKLLSANQNIRSKAARALLNVS 218

Query: 313 LIRKSKLGSCYFPAL-ILLHL 254
+ R+ K C+F + IL+HL
Sbjct: 219 ISREGKKQVCHFDVIPILVHL 239


tr_hit_id B8LQZ7
Definition tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 145
Score (bit) 57.4
E-value 6.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952762|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0014_P18, 5'
(573 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea... 57 6e-07
tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea... 45 0.004
tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solan... 42 0.024
tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medic... 42 0.024
tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citru... 40 0.070
tr|Q8G712|Q8G712_BIFLO Putative uncharacterized protein OS=Bifid... 36 1.7
tr|B3DU84|B3DU84_BIFLD Subtilisin-like serine protease OS=Bifido... 36 1.7
tr|Q3T552|Q3T552_BIFLO Endo-alpha-N-acetylgalactosaminidase OS=B... 36 1.7
tr|B2C4I9|B2C4I9_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7
tr|B2C4I3|B2C4I3_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7
tr|B2C4I2|B2C4I2_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7
tr|B2C4I1|B2C4I1_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7
tr|B2C4I0|B2C4I0_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7
tr|B2C4H8|B2C4H8_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7
tr|B2C4H7|B2C4H7_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7
tr|B2C4H6|B2C4H6_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 36 1.7
tr|Q3J402|Q3J402_RHOS4 Rod shape-determining protein MreC OS=Rho... 35 3.9
tr|A3PIE7|A3PIE7_RHOS1 Rod shape-determining protein MreC OS=Rho... 35 3.9
tr|Q70AN6|Q70AN6_RHOSH MreC protein OS=Rhodobacter sphaeroides G... 35 3.9
tr|A4WSY0|A4WSY0_RHOS5 Rod shape-determining protein MreC OS=Rho... 34 5.0
tr|Q231A2|Q231A2_TETTH Protein kinase domain containing protein ... 34 5.0

>tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 282

Score = 57.4 bits (137), Expect = 6e-07
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Frame = +2

Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376
M N YSFW + R +D W +AA++LA A+ R K DR+ +P E
Sbjct: 1 MANPYSFWQFGEE-LRGQARASDDHKWTLAASQLALAEHKRSKGDRTNRSEPTESPSEA- 58

Query: 377 IKQAKGRSKGRAE-DMLKGEGFNQKFSDGDLRYGDLGQKLGA------------------ 499
+ KG+ KG++E L+ N K + D + GD G K GA
Sbjct: 59 --KQKGKYKGKSEVSKLEALTLNLKQMNLDWKPGDAGVKGGALNDIYNASTPYHNNNSGN 116

Query: 500 --GNMSTSQIVGSADKRFKSLPPAE 568
N + S + DKRFK+LP E
Sbjct: 117 NNNNNNGSNNNNAYDKRFKTLPSTE 141


>tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 273

Score = 44.7 bits (104), Expect = 0.004
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Frame = +2

Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376
M + ++FW L ++ R +E DQ+W +AA+KLA +Q R K DR S + E
Sbjct: 1 MVDSFAFWQLGESLRGLSSE---DQNWTLAASKLATFEQTRGKSDRINSLEPKTSYAE-- 55

Query: 377 IKQAKGRSKGRAEDMLKGEGFN--QKFSDGDLRYG------DLGQKLGAGNMSTSQ---- 520
+K G+S G+ E++ + FN K ++ + G ++ + N +TS
Sbjct: 56 VKHRGGKSNGKLEEVNDNQ-FNLIWKPAEAGTKVGIVHGGYNINHVINYNNNNTSSNGNN 114

Query: 521 --IVGSADKRFKSLPPAE 568
S +KRFK+LP +E
Sbjct: 115 NYNNNSFEKRFKTLPSSE 132


>tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solanum
tuberosum PE=2 SV=1
Length = 298

Score = 42.0 bits (97), Expect = 0.024
Identities = 42/162 (25%), Positives = 62/162 (38%), Gaps = 37/162 (22%)
Frame = +2

Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLA----FADQMRLKFDRSRSDAKVVAP 364
MEN+ S+W D R ++ ED W AA KL+ + + R D S+S A+ + P
Sbjct: 1 MENMQSYWQFGD-ELRGQSKASEDHKWSTAALKLSEQMKYKGERRNNLDLSKSSAE-IRP 58

Query: 365 HEKNI-------------------KQAKGRSKGRAEDML--------------KGEGFNQ 445
++ K + SK R D + G
Sbjct: 59 RGNHMFQEDNKWESLNFNMLNLESKMTENMSKNRIMDSIYNANPVYLNPNFNSLGNSSLS 118

Query: 446 KFSDGDLRYGDLGQKLGAGNMSTSQIVGSADKRFKSLPPAET 571
KF+ + Y K N+ ++ S DKRFK+LP AET
Sbjct: 119 KFNASN--YTKEPSKNNNNNVESTNGNNSVDKRFKTLPAAET 158


>tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 302

Score = 42.0 bits (97), Expect = 0.024
Identities = 45/164 (27%), Positives = 64/164 (39%), Gaps = 39/164 (23%)
Frame = +2

Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376
M+N++SFW L D R ++ ED W + A+KLA + R K +R + P E
Sbjct: 1 MDNMHSFWQLGDE-LRGHSKASEDHKWLMVASKLA---EQRSKAERFNNLDLSKGPLETR 56

Query: 377 IKQAKGRSKGRAEDMLK------GEGFNQKFSDGDLRYGDLG-----QKLG---AGNMST 514
+ G + D L F + S LR G QK AGNM++
Sbjct: 57 PRDKFGFQEENKFDTLNLSMLNLDSKFTENMSKSSLRNGVYNMNAVYQKSNVNFAGNMNS 116

Query: 515 SQIVGSA-------------------------DKRFKSLPPAET 571
++ G+ DKRFK+LP AET
Sbjct: 117 NKYSGNVQLNKDPHNNNSNNNNNNNENNSNATDKRFKTLPAAET 160


>tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citrus
paradisi PE=2 SV=1
Length = 305

Score = 40.4 bits (93), Expect = 0.070
Identities = 48/177 (27%), Positives = 67/177 (37%), Gaps = 52/177 (29%)
Frame = +2

Query: 197 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 376
M+N++SFW L D R + EDQSW AA++L A+Q R K +R N
Sbjct: 1 MDNMHSFWQLGD-ELRGQSRTSEDQSWLRAASRL--AEQTRFKGERM-----------NN 46

Query: 377 IKQAKGRSKGRAEDML------KGEGFNQKF-------------SDGDLRYG-------- 475
+ +KG ++ R D + E FN F + LR G
Sbjct: 47 LDLSKGMTEIRPRDKIMYHEDNNFESFNFNFNMMNLDNKVVENVTKSSLRNGIYNMNAVY 106

Query: 476 ------DLG----QKLGAGNMST---------------SQIVGSADKRFKSLPPAET 571
++G K G N+S S + DKRFK+LP ET
Sbjct: 107 QKNSGHNMGNLMVNKYGGNNLSVKEAENNNNNNNNNNDSNANSALDKRFKTLPATET 163


>tr|Q8G712|Q8G712_BIFLO Putative uncharacterized protein
OS=Bifidobacterium longum GN=BL0464 PE=4 SV=1
Length = 1966

Score = 35.8 bits (81), Expect = 1.7
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +2

Query: 233 NNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRA 412
NN E+ E +W++A + F Q + F + + K VA + + Q+
Sbjct: 622 NNPYKSEEVPELVAWRIA---MNFGSQAQNPFLTTLDNVKKVALNTDGLGQSV------- 671

Query: 413 EDMLKGEGFNQKFSDGDLRYGDLGQKL-GAGNMSTSQIVGS 532
+LKG G N+ G YGD+GQ+L GA +M+T GS
Sbjct: 672 --LLKGYG-NEGHDSGHPDYGDIGQRLGGADDMNTMMEEGS 709


>tr|B3DU84|B3DU84_BIFLD Subtilisin-like serine protease
OS=Bifidobacterium longum (strain DJO10A) GN=aprE PE=4
SV=1
Length = 1937

Score = 35.8 bits (81), Expect = 1.7
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +2

Query: 233 NNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRA 412
NN E+ E +W++A + F Q + F + + K VA + + Q+
Sbjct: 593 NNPYKSEEVPELVAWRIA---MNFGSQAQNPFLTTLDNVKKVALNTDGLGQSV------- 642

Query: 413 EDMLKGEGFNQKFSDGDLRYGDLGQKL-GAGNMSTSQIVGS 532
+LKG G N+ G YGD+GQ+L GA +M+T GS
Sbjct: 643 --LLKGYG-NEGHDSGHPDYGDIGQRLGGADDMNTMMEEGS 680


>tr|Q3T552|Q3T552_BIFLO Endo-alpha-N-acetylgalactosaminidase
OS=Bifidobacterium longum subsp. longum JCM 1217
GN=engBF PE=4 SV=1
Length = 1966

Score = 35.8 bits (81), Expect = 1.7
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +2

Query: 233 NNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRA 412
NN E+ E +W++A + F Q + F + + K VA + + Q+
Sbjct: 622 NNPYKSEEVPELVAWRIA---MNFGSQAQNPFLTTLDNVKKVALNTDGLGQSV------- 671

Query: 413 EDMLKGEGFNQKFSDGDLRYGDLGQKL-GAGNMSTSQIVGS 532
+LKG G N+ G YGD+GQ+L GA +M+T GS
Sbjct: 672 --LLKGYG-NEGHDSGHPDYGDIGQRLGGADDMNTMMEEGS 709


>tr|B2C4I9|B2C4I9_BIFLO EngBF (Fragment) OS=Bifidobacterium longum
PE=4 SV=1
Length = 291

Score = 35.8 bits (81), Expect = 1.7
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +2

Query: 233 NNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRA 412
NN E+ E +W++A + F Q + F + + K VA + + Q+
Sbjct: 8 NNPYKSEEVPELVAWRIA---MNFGSQAQNPFLTTLDNVKKVALNTDGLGQSV------- 57

Query: 413 EDMLKGEGFNQKFSDGDLRYGDLGQKL-GAGNMSTSQIVGS 532
+LKG G N+ G YGD+GQ+L GA +M+T GS
Sbjct: 58 --LLKGYG-NEGHDSGHPDYGDIGQRLGGADDMNTMMEEGS 95


>tr|B2C4I3|B2C4I3_BIFLO EngBF (Fragment) OS=Bifidobacterium longum
PE=4 SV=1
Length = 289

Score = 35.8 bits (81), Expect = 1.7
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +2

Query: 233 NNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRA 412
NN E+ E +W++A + F Q + F + + K VA + + Q+
Sbjct: 6 NNPYKSEEVPELVAWRIA---MNFGSQAQNPFLTTLDNVKKVALNTDGLGQSV------- 55

Query: 413 EDMLKGEGFNQKFSDGDLRYGDLGQKL-GAGNMSTSQIVGS 532
+LKG G N+ G YGD+GQ+L GA +M+T GS
Sbjct: 56 --LLKGYG-NEGHDSGHPDYGDIGQRLGGADDMNTMMEEGS 93