DK952767 |
Clone id |
TST38A01NGRL0014_P23 |
Library |
TST38 |
Length |
600 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0014_P23. 5' end sequence. |
Accession |
DK952767 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2225Contig1 |
Sequence |
CTCCTGCTGCCATCTCTTCCACCTCTAGTGGCCACAGCTTGAAAAAGGTTTTTTCTCGTG TGAACTCCTCTGCATCAGCTCATTTGAGGGTTAATGCTTCTGAAATCTCAGGAAGTGGTC AGCAGAGTCCATTGCGAGAAGACTCAGGTGATCAGGGCTTGGAAGTTTTTACACCAAGAC CCTTGCAGCGGGATAAGTGGTGGCGGGACCATGATGGGTTCCTCATCACTGATGCATGGG GAGTAGAGGCACAGGGAATGAGTGCCATTATTCCGACTGTCTGGCTTCACCAATCATCTG AAGAATGCATGCAACTGGTTGCATATCAACATAAACAGTTGACTGTTATCATGCTAATTT CAGTAGTGCATTTGGCTGCTGATATAGACGGATCTCATGTGCTTAGAAATCAAGTTGTAG ACAAGGCATCCAATAGGCTGAGTGTCCTTGAAGAGCGAATATCTAGGGATTGGGGAGGTA TCAATGCCAATCATGTGCCGGGATACCGTTATCTTTGGGTTGACCATGATAGCAGAGTCT CTAAAGCTTCACCTGGAAGCAAAATAACAACCCTGACAAAGGACTCTCTACTATCCCTCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q13F19 |
Definition |
sp|Q13F19|FMT_RHOPS Methionyl-tRNA formyltransferase OS=Rhodopseudomonas palustris (strain BisB5) |
Align length |
108 |
Score (bit) |
34.7 |
E-value |
0.38 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8L8Y5 |
Definition |
tr|Q8L8Y5|Q8L8Y5_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana |
Align length |
194 |
Score (bit) |
146.0 |
E-value |
8.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952767|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0014_P23, 5' (600 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8L8Y5|Q8L8Y5_ARATH Putative uncharacterized protein OS=Arabi... 146 8e-34 tr|Q9S9N3|Q9S9N3_ARATH T24D18.12 protein OS=Arabidopsis thaliana... 145 2e-33 tr|Q0WTH0|Q0WTH0_ARATH Putative uncharacterized protein At1g1602... 145 2e-33 tr|Q9SAG9|Q9SAG9_ARATH F23A5.27 OS=Arabidopsis thaliana GN=F23A5... 132 2e-29 tr|Q93W79|Q93W79_ARATH At1g80910/F23A5_21 OS=Arabidopsis thalian... 132 2e-29 tr|Q7EY72|Q7EY72_ORYSJ Os08g0427300 protein OS=Oryza sativa subs... 128 3e-28 tr|A3BTB1|A3BTB1_ORYSJ Putative uncharacterized protein OS=Oryza... 128 3e-28 tr|B8A2L6|B8A2L6_MAIZE Putative uncharacterized protein OS=Zea m... 124 4e-27 tr|Q8W154|Q8W154_BRAOL Myrosinase (Fragment) OS=Brassica olerace... 124 5e-27 tr|A7P3X8|A7P3X8_VITVI Chromosome chr1 scaffold_5, whole genome ... 93 1e-17 tr|A9TJF7|A9TJF7_PHYPA Predicted protein OS=Physcomitrella paten... 36 1.9 tr|Q65LB0|Q65LB0_BACLD Oligoendopeptidase F,Pz peptidase OS=Baci... 35 3.3 tr|Q2KX78|Q2KX78_BORA1 Putative uncharacterized protein (Fragmen... 34 5.6 tr|P70922|P70922_BACLI Pz-peptidase OS=Bacillus licheniformis PE... 34 7.4 tr|B8ZU56|B8ZU56_MYCLE Putative methionyl-tRNA synthase OS=Mycob... 33 9.6 tr|Q6CCL8|Q6CCL8_YARLI YALI0C08327p OS=Yarrowia lipolytica GN=YA... 33 9.6
>tr|Q8L8Y5|Q8L8Y5_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 515
Score = 146 bits (369), Expect = 8e-34 Identities = 88/194 (45%), Positives = 119/194 (61%), Gaps = 9/194 (4%) Frame = +3
Query: 45 KVFSRVNSSASAHLRVN--ASEISGSGQQSP------LREDSGDQGLEVFTPRPLQRDKW 200 K FS SS S +LR +SEIS +P L +G+ V RPLQ DKW Sbjct: 250 KAFSSDTSSWS-YLRKGPGSSEISSRSNLAPVGSIDSLHSRNGNNMHHVI--RPLQNDKW 306
Query: 201 WRDHDGFLITDAWGVEAQGM-SAIIPTVWLHQSSEECMQLVAYQHKQLTVIMLISVVHLA 377 + DGFLITD WG+E G + IPT+WL Q+ E M L+AYQHK LT+++L+ + Sbjct: 307 TKGKDGFLITDIWGLETGGSPDSAIPTIWLQQTQER-MYLLAYQHKSLTLLLLMPTNAIV 365
Query: 378 ADIDGSHVLRNQVVDKASNRLSVLEERISRDWGGINANHVPGYRYLWVDHDSRVSKASPG 557 ++ QV++ AS R+ +EE ISR WGG NA H+ GYRYL VD+D++VS++SP Sbjct: 366 NGDLSISAVKQQVIEDASLRILKIEENISRGWGGENAYHIKGYRYLVVDNDTKVSRSSPS 425
Query: 558 SKITTLTKDSLLSL 599 K+TTL K+SLL+L Sbjct: 426 GKVTTLAKESLLAL 439
>tr|Q9S9N3|Q9S9N3_ARATH T24D18.12 protein OS=Arabidopsis thaliana GN=At1g16020 PE=4 SV=1 Length = 502
Score = 145 bits (366), Expect = 2e-33 Identities = 83/188 (44%), Positives = 118/188 (62%), Gaps = 9/188 (4%) Frame = +3
Query: 63 NSSASAHLRVN--ASEISGSGQQSP------LREDSGDQGLEVFTPRPLQRDKWWRDHDG 218 ++S+ ++LR +SEIS +P L +G+ V RPLQ DKW + DG Sbjct: 242 DTSSWSYLRKGPGSSEISSRSNLAPVGSIDSLHSRNGNNMHHVI--RPLQNDKWTKGKDG 299
Query: 219 FLITDAWGVEAQGM-SAIIPTVWLHQSSEECMQLVAYQHKQLTVIMLISVVHLAADIDGS 395 FLITD WG+E G + IPT+WL Q+ E M L+AYQHK LT+++L+ + Sbjct: 300 FLITDIWGLETGGSPDSAIPTIWLQQTQER-MYLLAYQHKSLTLLLLMPTNAIVNGDLSI 358
Query: 396 HVLRNQVVDKASNRLSVLEERISRDWGGINANHVPGYRYLWVDHDSRVSKASPGSKITTL 575 ++ QV++ AS R+ +EE ISR WGG NA H+ GYRYL VD+D++VS++SP K+TTL Sbjct: 359 SAVKQQVIEDASLRILKIEENISRGWGGENAYHIKGYRYLVVDNDTKVSRSSPSGKVTTL 418
Query: 576 TKDSLLSL 599 K+SLL+L Sbjct: 419 AKESLLAL 426
>tr|Q0WTH0|Q0WTH0_ARATH Putative uncharacterized protein At1g16020 OS=Arabidopsis thaliana GN=At1g16020 PE=2 SV=1 Length = 368
Score = 145 bits (366), Expect = 2e-33 Identities = 83/188 (44%), Positives = 118/188 (62%), Gaps = 9/188 (4%) Frame = +3
Query: 63 NSSASAHLRVN--ASEISGSGQQSP------LREDSGDQGLEVFTPRPLQRDKWWRDHDG 218 ++S+ ++LR +SEIS +P L +G+ V RPLQ DKW + DG Sbjct: 108 DTSSWSYLRKGPGSSEISSRSNLAPVGSIDSLHSRNGNNMHHVI--RPLQNDKWTKGKDG 165
Query: 219 FLITDAWGVEAQGM-SAIIPTVWLHQSSEECMQLVAYQHKQLTVIMLISVVHLAADIDGS 395 FLITD WG+E G + IPT+WL Q+ E M L+AYQHK LT+++L+ + Sbjct: 166 FLITDIWGLETGGSPDSAIPTIWLQQTQER-MYLLAYQHKSLTLLLLMPTNAIVNGDLSI 224
Query: 396 HVLRNQVVDKASNRLSVLEERISRDWGGINANHVPGYRYLWVDHDSRVSKASPGSKITTL 575 ++ QV++ AS R+ +EE ISR WGG NA H+ GYRYL VD+D++VS++SP K+TTL Sbjct: 225 SAVKQQVIEDASLRILKIEENISRGWGGENAYHIKGYRYLVVDNDTKVSRSSPSGKVTTL 284
Query: 576 TKDSLLSL 599 K+SLL+L Sbjct: 285 AKESLLAL 292
>tr|Q9SAG9|Q9SAG9_ARATH F23A5.27 OS=Arabidopsis thaliana GN=F23A5.27 PE=4 SV=1 Length = 513
Score = 132 bits (331), Expect = 2e-29 Identities = 79/199 (39%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Frame = +3
Query: 6 AAISSTSSGHSLKKVFSRVNSSASAHLRVNASEISGSGQQSPLREDSGDQGLEVFTPRPL 185 A S TSS L+K S S + ++ + G L +G V RPL Sbjct: 256 ALSSGTSSWSYLRK------GSGSPQISSRSTTVPPLGSGGTLPSGNGSSTGRVI--RPL 307
Query: 186 QRDKWWRDHDGFLITDAWGVEAQGMSAIIPTVWLHQSSEECMQLVAYQHKQLTVIMLISV 365 Q DKW + DGFL+TD WG++A PT+ L Q ++E L+ YQ+K LT+++L+ + Sbjct: 308 QHDKWSKGKDGFLVTDIWGLDAT------PTI-LIQKTQESFYLLTYQYKSLTLVLLVPI 360
Query: 366 VHLA-ADIDGSHVLRNQVVDKASNRLSVLEERISRDWGGINANHVPGYRYLWVDHDSRVS 542 + ++D S V + QV++ AS ++ +EE++S+ WGG NA HV GYRYL VD+D VS Sbjct: 361 AAIVNGELDISFV-KQQVIENASTKILKVEEKLSKGWGGENAYHVSGYRYLLVDNDMEVS 419
Query: 543 KASPGSKITTLTKDSLLSL 599 +ASP K+ TL K+SLL+L Sbjct: 420 RASPPGKVATLAKESLLAL 438
>tr|Q93W79|Q93W79_ARATH At1g80910/F23A5_21 OS=Arabidopsis thaliana PE=2 SV=1 Length = 255
Score = 132 bits (331), Expect = 2e-29 Identities = 79/199 (39%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Frame = +3
Query: 6 AAISSTSSGHSLKKVFSRVNSSASAHLRVNASEISGSGQQSPLREDSGDQGLEVFTPRPL 185 A S TSS L+K S S + ++ + G L +G V RPL Sbjct: 7 ALSSGTSSWSYLRK------GSGSPQISSRSTTVPPLGSGGTLPSGNGSSTGRVI--RPL 58
Query: 186 QRDKWWRDHDGFLITDAWGVEAQGMSAIIPTVWLHQSSEECMQLVAYQHKQLTVIMLISV 365 Q DKW + DGFL+TD WG++A PT+ L Q ++E L+ YQ+K LT+++L+ + Sbjct: 59 QHDKWSKGKDGFLVTDIWGLDAT------PTI-LIQKTQESFYLLTYQYKSLTLVLLVPI 111
Query: 366 VHLA-ADIDGSHVLRNQVVDKASNRLSVLEERISRDWGGINANHVPGYRYLWVDHDSRVS 542 + ++D S V + QV++ AS ++ +EE++S+ WGG NA HV GYRYL VD+D VS Sbjct: 112 AAIVNGELDISFV-KQQVIENASTKILKVEEKLSKGWGGENAYHVSGYRYLLVDNDMEVS 170
Query: 543 KASPGSKITTLTKDSLLSL 599 +ASP K+ TL K+SLL+L Sbjct: 171 RASPPGKVATLAKESLLAL 189
>tr|Q7EY72|Q7EY72_ORYSJ Os08g0427300 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0032E15.114 PE=2 SV=1 Length = 492
Score = 128 bits (321), Expect = 3e-28 Identities = 73/179 (40%), Positives = 107/179 (59%) Frame = +3
Query: 63 NSSASAHLRVNASEISGSGQQSPLREDSGDQGLEVFTPRPLQRDKWWRDHDGFLITDAWG 242 N+++ ++LR S +G S +G +E RPLQR+K ++ DGF+ + Sbjct: 243 NATSWSYLRKGTSVHAGPTSSS----SNGTASVE----RPLQREKLYKGKDGFVAAGSTT 294
Query: 243 VEAQGMSAIIPTVWLHQSSEECMQLVAYQHKQLTVIMLISVVHLAADIDGSHVLRNQVVD 422 E +G A +P +W Q+ E+ M L YQHK +T+++LI L DG ++ +++ Sbjct: 295 SEVRGAVAWVPILWFQQA-EDRMHLCVYQHKNITILLLIPASSLINGDDGIAHVKRHLLE 353
Query: 423 KASNRLSVLEERISRDWGGINANHVPGYRYLWVDHDSRVSKASPGSKITTLTKDSLLSL 599 AS + LE ++SR WGG NA HV GYRYL VD D +VS+ASP K+TTL+KDSLLSL Sbjct: 354 NASQNIVTLELKLSRGWGGENAYHVGGYRYLLVDPDRKVSRASPPGKVTTLSKDSLLSL 412
>tr|A3BTB1|A3BTB1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_026283 PE=4 SV=1 Length = 1397
Score = 128 bits (321), Expect = 3e-28 Identities = 73/179 (40%), Positives = 107/179 (59%) Frame = +3
Query: 63 NSSASAHLRVNASEISGSGQQSPLREDSGDQGLEVFTPRPLQRDKWWRDHDGFLITDAWG 242 N+++ ++LR S +G S +G +E RPLQR+K ++ DGF+ + Sbjct: 268 NATSWSYLRKGTSVHAGPTSSS----SNGTASVE----RPLQREKLYKGKDGFVAAGSTT 319
Query: 243 VEAQGMSAIIPTVWLHQSSEECMQLVAYQHKQLTVIMLISVVHLAADIDGSHVLRNQVVD 422 E +G A +P +W Q+ E+ M L YQHK +T+++LI L DG ++ +++ Sbjct: 320 SEVRGAVAWVPILWFQQA-EDRMHLCVYQHKNITILLLIPASSLINGDDGIAHVKRHLLE 378
Query: 423 KASNRLSVLEERISRDWGGINANHVPGYRYLWVDHDSRVSKASPGSKITTLTKDSLLSL 599 AS + LE ++SR WGG NA HV GYRYL VD D +VS+ASP K+TTL+KDSLLSL Sbjct: 379 NASQNIVTLELKLSRGWGGENAYHVGGYRYLLVDPDRKVSRASPPGKVTTLSKDSLLSL 437
>tr|B8A2L6|B8A2L6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 492
Score = 124 bits (311), Expect = 4e-27 Identities = 68/179 (37%), Positives = 104/179 (58%) Frame = +3
Query: 63 NSSASAHLRVNASEISGSGQQSPLREDSGDQGLEVFTPRPLQRDKWWRDHDGFLITDAWG 242 N+S+ ++LR S +G S +G+ RPL R+K + DGF+ D Sbjct: 243 NASSWSYLRKGTSVSAGQTSSSSNGTTAGE--------RPLLREKLSKGKDGFVAADFTA 294
Query: 243 VEAQGMSAIIPTVWLHQSSEECMQLVAYQHKQLTVIMLISVVHLAADIDGSHVLRNQVVD 422 EA+ P +W Q+ +ECM L YQHK LT+++L+ + +G ++ +++ Sbjct: 295 TEARCAVPSTPILWFQQA-DECMHLCIYQHKSLTILLLVPASSVINGEEGITHVKKAMLE 353
Query: 423 KASNRLSVLEERISRDWGGINANHVPGYRYLWVDHDSRVSKASPGSKITTLTKDSLLSL 599 AS ++ +E++++R WGG NA HV GYRYL VD + RVS+ASP K+TTL KDSLL+L Sbjct: 354 NASQKIVTVEQKLTRGWGGENAYHVSGYRYLLVDPERRVSRASPPGKVTTLAKDSLLAL 412
>tr|Q8W154|Q8W154_BRAOL Myrosinase (Fragment) OS=Brassica oleracea GN=MYR1 PE=2 SV=1 Length = 306
Score = 124 bits (310), Expect = 5e-27 Identities = 80/203 (39%), Positives = 120/203 (59%), Gaps = 5/203 (2%) Frame = +3
Query: 6 AAISSTSSGHSLKKVFSRVNSSA---SAHLRVNASEI-SGSGQQSPLREDSGDQGLEVFT 173 A S TSS L+K S +S+ S L V++ + SG+G D G + Sbjct: 49 ALSSGTSSWSYLRKGTSLSQTSSKSTSPQLLVSSDSLPSGNGH---------DAGRVI-- 97
Query: 174 PRPLQRDKWWRDHDGFLITDAWGVEAQGMSAIIPTVWLHQSSEECMQLVAYQHKQLTVIM 353 RPLQ +KW + FL+TD WG +A PT+WLHQ E + L+AYQ K LT+++ Sbjct: 98 -RPLQHNKWIKKGKMFLVTDIWGKDAT------PTIWLHQRQER-VHLLAYQQKCLTLVL 149
Query: 354 LISVVHLA-ADIDGSHVLRNQVVDKASNRLSVLEERISRDWGGINANHVPGYRYLWVDHD 530 L+ + ++D S V ++QV++ A+ ++ +EE++S+ WGG NA HV GYRYL VD+D Sbjct: 150 LVPTEAIVNGELDISFV-KHQVIENATAKILKVEEKLSKGWGGENAYHVSGYRYLLVDND 208
Query: 531 SRVSKASPGSKITTLTKDSLLSL 599 VS+ASP K+ TL K++LL++ Sbjct: 209 MEVSRASPSGKVATLAKETLLAV 231
>tr|A7P3X8|A7P3X8_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030616001 PE=4 SV=1 Length = 486
Score = 92.8 bits (229), Expect = 1e-17 Identities = 45/90 (50%), Positives = 63/90 (70%) Frame = +3
Query: 330 HKQLTVIMLISVVHLAADIDGSHVLRNQVVDKASNRLSVLEERISRDWGGINANHVPGYR 509 HK LT+I+L + + G V++ Q+V+ AS ++ +EE++S+ WGG NA HV GYR Sbjct: 317 HKSLTLILLFPISSILNGEQGISVVKQQIVENASLKMLKVEEKLSKGWGGENAYHVGGYR 376
Query: 510 YLWVDHDSRVSKASPGSKITTLTKDSLLSL 599 YL VD D VS+ASP K+TTLTK+SL+SL Sbjct: 377 YLLVDGDRNVSRASPPGKVTTLTKESLISL 406
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