DK952774 |
Clone id |
TST38A01NGRL0015_A06 |
Library |
TST38 |
Length |
642 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_A06. 5' end sequence. |
Accession |
DK952774 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2170Contig1 |
Sequence |
GTCATGGGGCCCTCTCTTTGGAAAACTCTTCTTTGCTTTCTGGGTTATAGTTCATCTTTA CCCATTCCTGAAGGGTTTGATGGGCAGACAAAACCGGACACCCACCATTGTCATTGTGTG GTCAATCCTTTTGGCTTCCATTTTCTCGCTTCTGTGGGTGAGGATCGACCCTTTTACCAC TCAGACGCCGACAACCACAGGAACGTGCGACGAGAACTGCTGATAGGAAACTTTAGCAAT ACTCATATGTAAAGCCTAACAAATAATCTGAGTATTACATGTCATATAGATGTGGGGGAA AGTGTGTATGGATCCCCACATTTTACTGGTAGGTGGTTCTGGATTCCAATTTTTCGACGG CACATATGCTGGGTAGTTTTTGGTATGCCTGCCATGTTGAGGGGGCTACAATCTGAGGAG TCTTTCTGGAGTACAGAGGAAATTCTTATTTATTAATTTGTATCCATAATCTTATCTCAC GAAACGTATAGCTCTATCACAAGGCTTCTGATTGGTGCTTTCAGCTCATAAAGCATCGTT GTTTTTGAAGGCAAGGAGTAATATCTTGTAAAGAGGAGCTCGTGGCTGTGCTGCAGCGCC GAGTCTTCTATGGAGCCAAAAAAAAAAAAAAAAAAAAAAACC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q941L0 |
Definition |
sp|Q941L0|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana |
Align length |
58 |
Score (bit) |
124.0 |
E-value |
3.0e-28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4VWW7 |
Definition |
tr|Q4VWW7|Q4VWW7_PINRA Cellulose synthase OS=Pinus radiata |
Align length |
58 |
Score (bit) |
125.0 |
E-value |
2.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952774|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_A06, 5' (602 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4VWW7|Q4VWW7_PINRA Cellulose synthase OS=Pinus radiata GN=Ce... 125 2e-27 tr|Q3Y4F6|Q3Y4F6_PHYPA Cellulose synthase catalytic subunit (Cel... 125 2e-27 tr|Q3Y4F5|Q3Y4F5_PHYPA Cellulose synthase catalytic subunit (Cel... 125 2e-27 tr|Q06FD0|Q06FD0_PHYPA Cellulose synthase 4 OS=Physcomitrella pa... 125 2e-27 tr|Q06FC8|Q06FC8_PHYPA Cellulose synthase 6 OS=Physcomitrella pa... 125 2e-27 tr|Q06FC7|Q06FC7_PHYPA Cellulose synthase 7 OS=Physcomitrella pa... 125 2e-27 tr|Q06FC5|Q06FC5_PHYPA Cellulose synthase 10 (Fragment) OS=Physc... 125 2e-27 tr|A9TE97|A9TE97_PHYPA Cellulose synthase 10, glycosyltransferas... 125 2e-27 tr|A9T9M3|A9T9M3_PHYPA Predicted protein OS=Physcomitrella paten... 125 2e-27 tr|A9SLF9|A9SLF9_PHYPA Cellulose synthase 4, glycosyltransferase... 125 2e-27 tr|Q6XP46|Q6XP46_SOLTU Cellulose synthase OS=Solanum tuberosum G... 125 2e-27 tr|B1NYI9|B1NYI9_EUCGR Cellulose synthase OS=Eucalyptus grandis ... 125 2e-27 tr|B1NYI6|B1NYI6_EUCGR Cellulose synthase OS=Eucalyptus grandis ... 125 2e-27 tr|A7Q2A3|A7Q2A3_VITVI Chromosome chr13 scaffold_45, whole genom... 125 2e-27 tr|Q9XGX6|Q9XGX6_GOSHI Cellulose synthase catalytic subunit OS=G... 124 3e-27 tr|Q8H2C6|Q8H2C6_POPTM Cellulose synthase OS=Populus tremuloides... 124 3e-27 tr|B8XPP5|B8XPP5_9ROSI Cellulose synthase OS=Betula luminifera G... 124 3e-27 tr|B2LWM1|B2LWM1_9ROSI Cellulose synthase OS=Betula platyphylla ... 124 3e-27 tr|B2LWM0|B2LWM0_9ROSI Cellulose synthase OS=Betula platyphylla ... 124 3e-27 tr|A7PWE3|A7PWE3_VITVI Chromosome chr8 scaffold_34, whole genome... 124 3e-27 tr|Q8GSW2|Q8GSW2_POPTM Cellulose synthase OS=Populus tremuloides... 124 4e-27 tr|Q67BC7|Q67BC7_MAIZE Cellulose synthase catalytic subunit 12 O... 124 4e-27 tr|Q06FC6|Q06FC6_PHYPA Cellulose synthase 8 OS=Physcomitrella pa... 124 4e-27 tr|A9SS88|A9SS88_PHYPA Cellulose synthase 8, glycosyltransferase... 124 4e-27 tr|A9RGN5|A9RGN5_PHYPA Putative cellulose synthase 3, glycosyltr... 124 4e-27 tr|A7PFP0|A7PFP0_VITVI Chromosome chr11 scaffold_14, whole genom... 124 4e-27 tr|A5ARG8|A5ARG8_VITVI Putative uncharacterized protein OS=Vitis... 124 4e-27 tr|Q9LLI6|Q9LLI6_MAIZE Cellulose synthase-4 OS=Zea mays GN=CesA-... 124 5e-27 tr|Q9LLI4|Q9LLI4_MAIZE Cellulose synthase-6 OS=Zea mays GN=CesA-... 124 5e-27 tr|Q9LLI3|Q9LLI3_MAIZE Cellulose synthase-7 OS=Zea mays GN=CesA-... 124 5e-27
>tr|Q4VWW7|Q4VWW7_PINRA Cellulose synthase OS=Pinus radiata GN=CesA10 PE=2 SV=1 Length = 1096
Score = 125 bits (314), Expect = 2e-27 Identities = 58/58 (100%), Positives = 58/58 (100%) Frame = +2
Query: 2 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 175 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF Sbjct: 1023 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 1080
>tr|Q3Y4F6|Q3Y4F6_PHYPA Cellulose synthase catalytic subunit (Cellulose synthase catalytic subunit CesA6) OS=Physcomitrella patens GN=CesA6 PE=2 SV=1 Length = 1096
Score = 125 bits (314), Expect = 2e-27 Identities = 58/58 (100%), Positives = 58/58 (100%) Frame = +2
Query: 2 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 175 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF Sbjct: 1023 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 1080
>tr|Q3Y4F5|Q3Y4F5_PHYPA Cellulose synthase catalytic subunit (Cellulose synthase catalytic subunit CesA7) OS=Physcomitrella patens GN=CesA7 PE=2 SV=1 Length = 1096
Score = 125 bits (314), Expect = 2e-27 Identities = 58/58 (100%), Positives = 58/58 (100%) Frame = +2
Query: 2 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 175 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF Sbjct: 1023 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 1080
>tr|Q06FD0|Q06FD0_PHYPA Cellulose synthase 4 OS=Physcomitrella patens GN=CesA4 PE=2 SV=1 Length = 1099
Score = 125 bits (314), Expect = 2e-27 Identities = 58/58 (100%), Positives = 58/58 (100%) Frame = +2
Query: 2 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 175 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF Sbjct: 1025 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 1082
>tr|Q06FC8|Q06FC8_PHYPA Cellulose synthase 6 OS=Physcomitrella patens GN=CesA6 PE=2 SV=1 Length = 1096
Score = 125 bits (314), Expect = 2e-27 Identities = 58/58 (100%), Positives = 58/58 (100%) Frame = +2
Query: 2 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 175 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF Sbjct: 1023 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 1080
>tr|Q06FC7|Q06FC7_PHYPA Cellulose synthase 7 OS=Physcomitrella patens GN=CesA7 PE=2 SV=1 Length = 1096
Score = 125 bits (314), Expect = 2e-27 Identities = 58/58 (100%), Positives = 58/58 (100%) Frame = +2
Query: 2 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 175 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF Sbjct: 1023 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 1080
>tr|Q06FC5|Q06FC5_PHYPA Cellulose synthase 10 (Fragment) OS=Physcomitrella patens GN=CesA10 PE=2 SV=1 Length = 601
Score = 125 bits (314), Expect = 2e-27 Identities = 58/58 (100%), Positives = 58/58 (100%) Frame = +2
Query: 2 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 175 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF Sbjct: 528 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 585
>tr|A9TE97|A9TE97_PHYPA Cellulose synthase 10, glycosyltransferase family 2 OS=Physcomitrella patens subsp. patens GN=cesA10 PE=4 SV=1 Length = 1095
Score = 125 bits (314), Expect = 2e-27 Identities = 58/58 (100%), Positives = 58/58 (100%) Frame = +2
Query: 2 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 175 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF Sbjct: 1022 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 1079
>tr|A9T9M3|A9T9M3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_192906 PE=4 SV=1 Length = 593
Score = 125 bits (314), Expect = 2e-27 Identities = 58/58 (100%), Positives = 58/58 (100%) Frame = +2
Query: 2 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 175 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF Sbjct: 520 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 577
>tr|A9SLF9|A9SLF9_PHYPA Cellulose synthase 4, glycosyltransferase family 2 OS=Physcomitrella patens subsp. patens GN=cesA4 PE=4 SV=1 Length = 1099
Score = 125 bits (314), Expect = 2e-27 Identities = 58/58 (100%), Positives = 58/58 (100%) Frame = +2
Query: 2 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 175 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF Sbjct: 1025 SWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 1082
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