DK952779 |
Clone id |
TST38A01NGRL0015_A11 |
Library |
TST38 |
Length |
606 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_A11. 5' end sequence. |
Accession |
DK952779 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL228Contig1 |
Sequence |
GGTTCGAGACCGACATCGCCATCGCTGCAGTGCCGGCAAGCTTCCCCCCTCATTCCCTCT GTTCGCAGTCCCGTGATCATGAATCCTGAATATGACTATCTTTTCAAACTTTTGCTGATT GGTGATTCGGGCGTTGGGAAATCTTGCCTTTTGCTTCGGTTTGCTGATGATTCTTATCTG GAAAGCTACATCAGCACAATTGGTGTCGACTTTAAAATTCGCACAGTTGAACTTGACAGC AAAACCATCAAGCTACAGATTTGGGACACTGCTGGTCAAGAGCGATTTCGGACAATCACA AGCAGCTATTATCGGGGAGCTCATGGCATTATTATCGTTTATGACGTTACAGACCAGGAA AGCTTCAACAATGTAAAGCAGTGGTTGAATGAAATTGATCGTTATGCTAGTGAAAATGTG AACAAACTTTTGGTTGGGAACAAGAGCGATTTGACAGCAAAGAAAGTTGTTGATACACAA ACTGCTAAGGCATATGCTGATGAAATTGGCATTCCCTTTCTGGAAACGAGTGCAAAGAAT GCGAGTAATGTGGAGGAAGCATTTATGACCATGGCGGCAGAAATAAAGAACAGAATGGCA AGTCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P31584 |
Definition |
sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri |
Align length |
176 |
Score (bit) |
328.0 |
E-value |
2.0e-89 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKP5 |
Definition |
tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
176 |
Score (bit) |
337.0 |
E-value |
3.0e-91 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952779|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_A11, 5' (606 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea... 337 3e-91 tr|A9SLS3|A9SLS3_PHYPA Rab1/RabD-family small GTPase OS=Physcomi... 335 1e-90 tr|A9SMJ7|A9SMJ7_PHYPA Rab1/RabD-family small GTPase OS=Physcomi... 334 2e-90 tr|A9NPH9|A9NPH9_PICSI Putative uncharacterized protein OS=Picea... 328 1e-88 tr|B7FH02|B7FH02_MEDTR Putative uncharacterized protein OS=Medic... 328 1e-88 tr|Q1WK27|Q1WK27_CHLIN YptC1 OS=Chlamydomonas incerta GN=yptC1 P... 328 2e-88 tr|A8JHQ7|A8JHQ7_CHLRE Small rab-related GTPase OS=Chlamydomonas... 328 2e-88 tr|A9PEC2|A9PEC2_POPTR Putative uncharacterized protein OS=Popul... 327 3e-88 tr|A7R0F4|A7R0F4_VITVI Chromosome undetermined scaffold_306, who... 327 3e-88 tr|Q9SXT5|Q9SXT5_CICAR Rab-type small GTP-binding protein OS=Cic... 325 1e-87 tr|Q08153|Q08153_PEA GTP-binding protein OS=Pisum sativum PE=2 SV=1 325 2e-87 tr|A9P8E1|A9P8E1_POPTR Putative uncharacterized protein OS=Popul... 325 2e-87 tr|Q40203|Q40203_LOTJA RAB1C OS=Lotus japonicus GN=rab1C PE=2 SV=1 324 3e-87 tr|B4FC26|B4FC26_MAIZE Putative uncharacterized protein OS=Zea m... 324 3e-87 tr|Q949E2|Q949E2_ORYSA Putative GTP-binding protein OS=Oryza sat... 323 5e-87 tr|Q6H8G2|Q6H8G2_ORYSJ cDNA, clone: J100058B03, full insert sequ... 323 5e-87 tr|Q0JQ62|Q0JQ62_ORYSJ cDNA clone:006-208-C02, full insert seque... 323 5e-87 tr|A2WLD6|A2WLD6_ORYSI Putative uncharacterized protein OS=Oryza... 323 5e-87 tr|B4FQY4|B4FQY4_MAIZE Putative uncharacterized protein OS=Zea m... 323 6e-87 tr|O24112|O24112_NICPL Small GTP-binding protein OS=Nicotiana pl... 322 1e-86 tr|B3TLR9|B3TLR9_ELAGV Ras-related protein RIC1 OS=Elaeis guinee... 322 1e-86 tr|Q2A9H3|Q2A9H3_BRAOL GTP-binding protein, putative OS=Brassica... 321 2e-86 tr|Q2A9V7|Q2A9V7_BRAOL GTP-binding protein, putative OS=Brassica... 320 3e-86 tr|B6RB23|B6RB23_HALDI Ras-related protein Rab-1A OS=Haliotis di... 320 3e-86 tr|A7PBQ0|A7PBQ0_VITVI Chromosome chr16 scaffold_10, whole genom... 320 5e-86 tr|Q9FPJ4|Q9FPJ4_ARATH AT5g47200 (Ras-related small GTP-binding ... 319 7e-86 tr|Q9SEH3|Q9SEH3_ARATH Ras-related small GTP-binding protein (Ra... 318 1e-85 tr|Q8W4S8|Q8W4S8_ARATH AT4g17530/dl4800c OS=Arabidopsis thaliana... 318 1e-85 tr|Q41338|Q41338_SOLLC Small GTP-binding protein OS=Solanum lyco... 318 2e-85 tr|Q68V18|Q68V18_POAPR RAB1-like OS=Poa pratensis GN=rab1-1 PE=2... 317 3e-85
>tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 202
Score = 337 bits (864), Expect = 3e-91 Identities = 169/176 (96%), Positives = 173/176 (98%) Frame = +1
Query: 79 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 258 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 259 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 438 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 439 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQ 606 NK+DLTAKKVVD QTAKA+ADEIGIPFLETSAKNA NVE+AFMTMAAEIKNRMASQ Sbjct: 121 NKNDLTAKKVVDYQTAKAFADEIGIPFLETSAKNAINVEDAFMTMAAEIKNRMASQ 176
>tr|A9SLS3|A9SLS3_PHYPA Rab1/RabD-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabD11 PE=3 SV=1 Length = 204
Score = 335 bits (859), Expect = 1e-90 Identities = 167/176 (94%), Positives = 173/176 (98%) Frame = +1
Query: 79 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 258 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 259 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 438 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 439 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQ 606 NKSDL +KKVVD +TAKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEIKNRMASQ Sbjct: 121 NKSDLASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQ 176
>tr|A9SMJ7|A9SMJ7_PHYPA Rab1/RabD-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabD12 PE=3 SV=1 Length = 203
Score = 334 bits (857), Expect = 2e-90 Identities = 168/176 (95%), Positives = 172/176 (97%) Frame = +1
Query: 79 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 258 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 259 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 438 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 439 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQ 606 NKSDL +KKVVD TAKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEIKNRMASQ Sbjct: 121 NKSDLASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQ 176
>tr|A9NPH9|A9NPH9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 202
Score = 328 bits (842), Expect = 1e-88 Identities = 164/176 (93%), Positives = 169/176 (96%) Frame = +1
Query: 79 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 258 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 259 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 438 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 439 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQ 606 NK DLTA + VD TAKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEIKNRMASQ Sbjct: 121 NKCDLTANRAVDYDTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQ 176
>tr|B7FH02|B7FH02_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 202
Score = 328 bits (841), Expect = 1e-88 Identities = 163/176 (92%), Positives = 171/176 (97%) Frame = +1
Query: 79 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 258 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 259 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 438 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 439 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQ 606 NKSDL+ KKVV ++TAKA+ADEIGIPF+ETSAKNASNVE+AFM MAAEIKNRMASQ Sbjct: 121 NKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQ 176
>tr|Q1WK27|Q1WK27_CHLIN YptC1 OS=Chlamydomonas incerta GN=yptC1 PE=2 SV=1 Length = 203
Score = 328 bits (840), Expect = 2e-88 Identities = 163/176 (92%), Positives = 170/176 (96%) Frame = +1
Query: 79 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 258 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVELD K IKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQ 60
Query: 259 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 438 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 439 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQ 606 NKSDLT+KKVV+ AKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEIKNRMASQ Sbjct: 121 NKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQ 176
>tr|A8JHQ7|A8JHQ7_CHLRE Small rab-related GTPase OS=Chlamydomonas reinhardtii GN=RABD1 PE=3 SV=1 Length = 203
Score = 328 bits (840), Expect = 2e-88 Identities = 163/176 (92%), Positives = 170/176 (96%) Frame = +1
Query: 79 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 258 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVELD K IKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQ 60
Query: 259 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 438 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 439 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQ 606 NKSDLT+KKVV+ AKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEIKNRMASQ Sbjct: 121 NKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQ 176
>tr|A9PEC2|A9PEC2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 203
Score = 327 bits (838), Expect = 3e-88 Identities = 163/176 (92%), Positives = 169/176 (96%) Frame = +1
Query: 79 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 258 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 259 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 438 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 439 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQ 606 NK DLTA KVV +TAKA+ADEIGIPF+ETSAKNA+NVE+AFM MAAEIKNRMASQ Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQ 176
>tr|A7R0F4|A7R0F4_VITVI Chromosome undetermined scaffold_306, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011421001 PE=3 SV=1 Length = 203
Score = 327 bits (838), Expect = 3e-88 Identities = 163/176 (92%), Positives = 169/176 (96%) Frame = +1
Query: 79 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 258 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 259 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 438 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 439 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQ 606 NK DLTA KVV +TAKA+ADEIGIPF+ETSAKNA+NVE+AFM MAAEIKNRMASQ Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQ 176
>tr|Q9SXT5|Q9SXT5_CICAR Rab-type small GTP-binding protein OS=Cicer arietinum PE=2 SV=1 Length = 202
Score = 325 bits (833), Expect = 1e-87 Identities = 161/176 (91%), Positives = 169/176 (96%) Frame = +1
Query: 79 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 258 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 259 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 438 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 439 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQ 606 NK DL A KVV ++TAKA+ADEIGIPF+ETSAKNA+NVE+AFM MAAEIKNRMASQ Sbjct: 121 NKCDLAANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQ 176
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