| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952783|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_A15, 5'
(658 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 209 5e-63
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 187 1e-56
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 71 3e-19
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla... 91 5e-18
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 65 8e-17
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl... 86 2e-16
sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl... 70 3e-16
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl... 85 4e-16
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl... 80 7e-15
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 78 5e-14
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 77 6e-14
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas... 77 1e-13
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 74 5e-13
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F... 74 9e-13
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 74 9e-13
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c... 73 1e-12
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 73 1e-12
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 73 1e-12
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 72 2e-12
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 72 2e-12
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 72 2e-12
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 72 2e-12
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 71 4e-12
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 71 4e-12
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 71 4e-12
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 71 4e-12
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 71 4e-12
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 71 4e-12
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 71 4e-12
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 71 4e-12
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21,
chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
Length = 245
Score = 209 bits (531), Expect(2) = 5e-63
Identities = 109/182 (59%), Positives = 122/182 (67%), Gaps = 2/182 (1%)
Frame = +1
Query: 55 MASTS--MACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRP 228
MAS+S +CS VP+L P +S G P A A + R+T S+EW PGQPRP
Sbjct: 1 MASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYA---TTSGRVTM--SAEWFPGQPRP 55
Query: 229 AHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDA 408
AHLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAML VPG+L+PEALGLGNWV A
Sbjct: 56 AHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKA 115
Query: 409 QKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI*PS 588
Q+WAA P G ATYLGNPVPWGNL R E DPE++KYPG A P
Sbjct: 116 QEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPL 175
Query: 589 WF 594
F
Sbjct: 176 GF 177
Score = 53.1 bits (126), Expect(2) = 5e-63
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLGFSKD KFEE K+KE+KNGRLA
Sbjct: 169 GGAFDPLGFSKDPAKFEELKLKEIKNGRLA 198
Score = 30.8 bits (68), Expect = 6.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 265 FDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEA 381
FDPLG ++ P F K E+ + R AMLA G + ++
Sbjct: 172 FDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQS 210
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
Length = 246
Score = 187 bits (476), Expect(2) = 1e-56
Identities = 93/176 (52%), Positives = 112/176 (63%)
Frame = +1
Query: 58 ASTSMACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPAHL 237
++T M+C V + KS+F A P + S++W+PGQPRP++L
Sbjct: 3 SNTLMSCGIPAVCPSFLSSTKSKFAAA---MPVYVGATNFMSRFSMSADWMPGQPRPSYL 59
Query: 238 DGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQKW 417
DGS+PGDFGFD LGL EVP N R+KESELIHCRWAMLAVPGI++PEALGLGNWV AQ+W
Sbjct: 60 DGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEW 119
Query: 418 AATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI*P 585
AA PGG ATYLG PVPWG L R+ E D E++KYPG A P
Sbjct: 120 AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDP 175
Score = 53.1 bits (126), Expect(2) = 1e-56
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLG+SKD KFEE KVKE+KNGRLA
Sbjct: 170 GGAFDPLGYSKDPAKFEELKVKEIKNGRLA 199
Score = 33.5 bits (75), Expect = 1.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 265 FDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLG 393
FDPLG ++ P F K E+ + R A+LA+ G + ++ LG
Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLG 215
>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26,
chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 71.2 bits (173), Expect(2) = 3e-19
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Frame = +1
Query: 226 PAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGL--GNW 399
P +L+G GD+G+DP GL + PENFA+++ ELIH RWAML G ++PEAL N
Sbjct: 82 PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANC 141
Query: 400 VDAQKWAAT-----PGGHATYLGNPVP 465
W T G Y G +P
Sbjct: 142 GPEAVWFKTGALLLDGNTLNYFGKNIP 168
Score = 44.3 bits (103), Expect(2) = 3e-19
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GGPFDPLG +KD ++ KVKE+KNGRLA
Sbjct: 203 GGPFDPLGLAKDPEQGALLKVKEIKNGRLA 232
Score = 32.7 bits (73), Expect = 1.7
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 265 FDPLGLAEVPENFARFKESELIHCRWAMLAVPGILL 372
FDPLGLA+ PE A K E+ + R AM A+ G +
Sbjct: 206 FDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFI 241
>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
Length = 252
Score = 90.9 bits (224), Expect = 5e-18
Identities = 51/110 (46%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Frame = +1
Query: 118 KSRFLGAPS--------FAPALACSNGSRLTCMASSEWLPGQPRPAHLDGSSPGDFGFDP 273
KSRFLG S F P + S EWLPG P +L GS PGD GFDP
Sbjct: 19 KSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDP 78
Query: 274 LGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQKWAA 423
LGLAE PEN F ++EL++ RWAML V G+LLPE ++ KW A
Sbjct: 79 LGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYA 128
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
chloroplastic OS=Pinus thunbergii PE=2 SV=1
Length = 266
Score = 65.5 bits (158), Expect(2) = 8e-17
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Frame = +1
Query: 226 PAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEAL------- 384
P++L G PGD+G+D ++ PE FA+ +E E+IHCRWAML G + PE L
Sbjct: 67 PSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKF 126
Query: 385 GLGNWVDAQKWAATPGGHATYLGNP 459
G W A + GG Y GNP
Sbjct: 127 GEAVWFKAGAQIFSEGG-LDYAGNP 150
Score = 42.0 bits (97), Expect(2) = 8e-17
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +2
Query: 563 IQGGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
+ GG FDPLG + D + E KVKE+KNGRLA
Sbjct: 190 LPGGAFDPLGLADDPEACAELKVKEIKNGRLA 221
Score = 33.1 bits (74), Expect = 1.3
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1
Query: 235 LDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILL 372
LD PG FDPLGLA+ PE A K E+ + R AM ++ G +
Sbjct: 186 LDPLLPGG-AFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFV 230
>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
PE=1 SV=1
Length = 231
Score = 85.9 bits (211), Expect = 2e-16
Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Frame = +1
Query: 151 PALACSNGSRLT-----CMASSEWLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFK 315
P+ A S R T A WLPG PA+LDGS GD GFDPL LAE PE+ F
Sbjct: 13 PSPAASGSPRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFV 72
Query: 316 ESELIHCRWAMLAVPGILLPEALGLGNWVDAQKWAATPG 432
++++++ RWAML V G+L+PE L ++A +W PG
Sbjct: 73 QADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPG 111
>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3,
chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=2
SV=1
Length = 276
Score = 70.5 bits (171), Expect(2) = 3e-16
Identities = 54/165 (32%), Positives = 63/165 (38%), Gaps = 43/165 (26%)
Frame = +1
Query: 205 WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPE----------------------------- 297
W PG P LDGS GD GFDP GL + E
Sbjct: 59 WFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESS 118
Query: 298 --------------NFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQKWAATPGG 435
RF+E ELIH RWAML G + EAL W DA K G
Sbjct: 119 EIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEG- 177
Query: 436 HATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPG 570
++YLG P+P+ +L RN E DPE+R YPG
Sbjct: 178 -SSYLGQPLPF-SLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPG 220
Score = 35.0 bits (79), Expect(2) = 3e-16
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLG + D +K + K+ E+K+ RLA
Sbjct: 220 GGYFDPLGLAADPEKLDTLKLAEIKHSRLA 249
Score = 33.9 bits (76), Expect = 0.78
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 250 PGDFGFDPLGLAEVPENFARFKESELIHCRWAMLA 354
PG + FDPLGLA PE K +E+ H R AM+A
Sbjct: 219 PGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVA 252
>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
Length = 270
Score = 84.7 bits (208), Expect = 4e-16
Identities = 49/135 (36%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Frame = +1
Query: 73 ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRL----------------TCMASSE 204
AC+ + A++ P SR G+ + G RL C+A+
Sbjct: 4 ACASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADP 63
Query: 205 ----WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILL 372
W PG P LDGS PGDFGFDPLGLA PE+ +++EL+HCRWAML GI +
Sbjct: 64 DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFI 123
Query: 373 PEALGLGNWVDAQKW 417
PE L ++ W
Sbjct: 124 PELLTKIGILNTPSW 138
Score = 32.0 bits (71), Expect = 3.0
Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +2
Query: 578 FDPLGF-SKDVKKFEEYKVKELKNGRLA 658
FDPLG+ S K +E + KE+KNGRLA
Sbjct: 202 FDPLGWGSGSPAKIKELRTKEIKNGRLA 229
>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
Length = 251
Score = 80.5 bits (197), Expect = 7e-15
Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Frame = +1
Query: 202 EWLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEA 381
EWLPG P +L GS GD GFDPLGLAE PEN F ++EL++ RWAML V G+LLPE
Sbjct: 56 EWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEV 115
Query: 382 ------LGLGNWVDAQK 414
+ + W DA K
Sbjct: 116 FTKIGIINVPEWYDAGK 132
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 77.8 bits (190), Expect = 5e-14
Identities = 54/154 (35%), Positives = 75/154 (48%), Gaps = 19/154 (12%)
Frame = +1
Query: 55 MASTSMACSHQLVPALSVP-LPKSRFLGAPSFAPALACSNGSRLTCMASSEW-------- 207
MA+T+M+ S +V LP S +G + +++ +SS W
Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVS--SSSPWYGSDRVLY 58
Query: 208 ---LPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPE 378
L G+P P++L G PGD+G+D GL+ PE FA+ +E E+IHCRWAML G + PE
Sbjct: 59 LGPLSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 379 AL-------GLGNWVDAQKWAATPGGHATYLGNP 459
L G W A + GG YLGNP
Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFSDGG-LDYLGNP 150
Score = 42.4 bits (98), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLG ++ + F E KVKE+KNGRLA
Sbjct: 192 GGSFDPLGLAERPQAFAELKVKEIKNGRLA 221
Score = 38.9 bits (89), Expect = 0.024
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Frame = +1
Query: 127 FLGAPSF--APALACSNGSRLTCMASSEW--LPGQPRPAHLDGSSPGDFGFDPLGLAEVP 294
+LG PS A +L ++ M + E + G P +D PG FDPLGLAE P
Sbjct: 146 YLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGG-SFDPLGLAERP 204
Query: 295 ENFARFKESELIHCRWAMLAVPGILLPEAL-GLGNWVDAQKWAATPGGHATYL 450
+ FA K E+ + R AM ++ G + + G G D A P + +L
Sbjct: 205 QAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWL 257
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952783|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_A15, 5'
(658 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea... 209 7e-63
tr|A9NRY9|A9NRY9_PICSI Putative uncharacterized protein OS=Picea... 207 7e-63
tr|A9P266|A9P266_PICSI Putative uncharacterized protein OS=Picea... 209 1e-62
tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea... 207 2e-62
tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza ... 206 8e-62
tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subs... 206 8e-62
tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza... 206 8e-62
tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding prote... 206 2e-61
tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea... 204 1e-60
tr|B7FH03|B7FH03_MEDTR Putative uncharacterized protein OS=Medic... 199 6e-60
tr|A5AE63|A5AE63_VITVI Putative uncharacterized protein OS=Vitis... 196 5e-59
tr|Q02069|Q02069_PINSY Type 1 chlorophyll a /b-binding protein O... 196 8e-59
tr|Q40512|Q40512_TOBAC Photosystem I light-harvesting chlorophyl... 194 2e-58
tr|A9PJ58|A9PJ58_POPJC Putative uncharacterized protein OS=Popul... 192 5e-58
tr|Q9C5R7|Q9C5R7_ARATH AT3g54890 OS=Arabidopsis thaliana GN=AT3g... 196 5e-58
tr|Q01667|Q01667_ARATH AT3g54890 (Chlorophyll A/B-binding protei... 195 9e-58
tr|Q7DM40|Q7DM40_PINSY Type 1 chlorophyll a /b-binding protein (... 191 3e-57
tr|A8MS75|A8MS75_ARATH Uncharacterized protein At3g54890.4 OS=Ar... 195 2e-56
tr|A9T399|A9T399_PHYPA Predicted protein OS=Physcomitrella paten... 219 9e-56
tr|A9TJX6|A9TJX6_PHYPA Predicted protein OS=Physcomitrella paten... 201 3e-50
tr|A9T3X6|A9T3X6_PHYPA Predicted protein OS=Physcomitrella paten... 201 3e-50
tr|Q9M539|Q9M539_9LAMI Chlorophyll a/b-binding protein type I (F... 162 8e-49
tr|Q6V8T3|Q6V8T3_MALDO Chlorophyll a/b-binding protein type I (F... 183 9e-45
tr|Q14K86|Q14K86_PLAAC Chlorophyll a/b-binding protein, photosys... 182 1e-44
tr|Q3EAJ6|Q3EAJ6_ARATH Uncharacterized protein At3g54890.3 OS=Ar... 178 2e-43
tr|Q3E725|Q3E725_ARATH Uncharacterized protein At3g54890.2 OS=Ar... 178 2e-43
tr|A2SY12|A2SY12_MESVI Light-harvesting chlorophyll-a/b binding ... 135 5e-36
tr|Q9FVE3|Q9FVE3_CHLRE Chlorophyll A-B binding protein of LHCI O... 108 6e-30
tr|A8J249|A8J249_CHLRE Light-harvesting protein of photosystem I... 108 8e-30
tr|Q05093|Q05093_CHLRE Light harvesting complex I protein (Light... 108 8e-30
>tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247
Score = 209 bits (532), Expect(2) = 7e-63
Identities = 105/181 (58%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Frame = +1
Query: 61 STSMACSHQLVPAL---SVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 231
+T++ CSH + P + + KSRF +P+ + +L NGSR++ S+EW+PGQPRP
Sbjct: 2 ATAVGCSHVVAPVVFAGAFSSAKSRFF-SPTNSLSLGVCNGSRVSM--SAEWMPGQPRPP 58
Query: 232 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 411
HLDGS+PGDFGFDPL L VPEN R+KESELIHCRWAMLAVPG+L+PEALGLGNWV+AQ
Sbjct: 59 HLDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQ 118
Query: 412 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI*PSW 591
KWAA PG ATYLG PVPWG L RN E DPE+RKYPG A P
Sbjct: 119 KWAAIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQRNGEPDPEKRKYPGGAFDPLG 178
Query: 592 F 594
F
Sbjct: 179 F 179
Score = 55.8 bits (133), Expect(2) = 7e-63
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLGFSKD KF+EYKVKE+KNGRLA
Sbjct: 171 GGAFDPLGFSKDPAKFKEYKVKEIKNGRLA 200
Score = 33.9 bits (76), Expect = 9.1
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +1
Query: 103 SVPLPKSRFLGAP---SFAPALACSNGSRLTCMASSEWLPGQPRPAHLDGSSPGDFGFDP 273
++P ++ +LGAP + P + + + S G+P P PG FDP
Sbjct: 122 AIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQR--NGEPDPEKR--KYPGG-AFDP 176
Query: 274 LGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLG 393
LG ++ P F +K E+ + R A+LA G + + G
Sbjct: 177 LGFSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPG 216
>tr|A9NRY9|A9NRY9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247
Score = 207 bits (528), Expect(2) = 7e-63
Identities = 106/181 (58%), Positives = 125/181 (69%), Gaps = 3/181 (1%)
Frame = +1
Query: 61 STSMACSHQLVP---ALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 231
+T++ C H + P A + KSRF +P+ + +L NGSR++ S+EW+PGQPRPA
Sbjct: 2 ATAVGCLHIVAPVAFAGTFSSAKSRFF-SPTNSLSLGVCNGSRVSM--SAEWMPGQPRPA 58
Query: 232 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 411
HLDGS+PGDFGFDPLGL VPEN R+KESELIHCRWAMLAVPG+L+PEALGLGNWV+AQ
Sbjct: 59 HLDGSAPGDFGFDPLGLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQ 118
Query: 412 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI*PSW 591
KWAA PGG ATYLG PVPWG RN E D E+RKYPG A P
Sbjct: 119 KWAAIPGGQATYLGVPVPWGYFPIILSIFFLKMAFAESQRNGEPDLEKRKYPGGAFDPLG 178
Query: 592 F 594
F
Sbjct: 179 F 179
Score = 57.4 bits (137), Expect(2) = 7e-63
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLGFSKD KFEEYKVKE+KNGRLA
Sbjct: 171 GGAFDPLGFSKDPAKFEEYKVKEIKNGRLA 200
>tr|A9P266|A9P266_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 247
Score = 209 bits (531), Expect(2) = 1e-62
Identities = 105/181 (58%), Positives = 124/181 (68%), Gaps = 3/181 (1%)
Frame = +1
Query: 61 STSMACSHQLVPAL---SVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 231
+T++ CSH + P + + KSRF +P+ + +L NGSR++ S EW+PGQPRP
Sbjct: 2 ATAVGCSHVVAPVVFAGAFSSAKSRFF-SPTNSLSLGVCNGSRVSM--SDEWMPGQPRPP 58
Query: 232 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 411
HLDGS+PGDFGFDPL L VPEN R+KESELIHCRWAMLAVPG+L+PEALGLGNWV+AQ
Sbjct: 59 HLDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEALGLGNWVEAQ 118
Query: 412 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI*PSW 591
KWAA PG ATYLG PVPWG L RN E DPE+RKYPG A P
Sbjct: 119 KWAAIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQRNGEPDPEKRKYPGGAFDPLG 178
Query: 592 F 594
F
Sbjct: 179 F 179
Score = 55.8 bits (133), Expect(2) = 1e-62
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLGFSKD KF+EYKVKE+KNGRLA
Sbjct: 171 GGAFDPLGFSKDPAKFKEYKVKEIKNGRLA 200
Score = 33.9 bits (76), Expect = 9.1
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +1
Query: 103 SVPLPKSRFLGAP---SFAPALACSNGSRLTCMASSEWLPGQPRPAHLDGSSPGDFGFDP 273
++P ++ +LGAP + P + + + S G+P P PG FDP
Sbjct: 122 AIPGNQATYLGAPVPWGYLPVILAVEFLSIAFVESQR--NGEPDPEKR--KYPGG-AFDP 176
Query: 274 LGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLG 393
LG ++ P F +K E+ + R A+LA G + + G
Sbjct: 177 LGFSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPG 216
>tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea
mays PE=2 SV=1
Length = 245
Score = 207 bits (527), Expect(2) = 2e-62
Identities = 110/183 (60%), Positives = 123/183 (67%)
Frame = +1
Query: 46 VRAMASTSMACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPR 225
V A +S +CS VP+L P +S L AP A A + R+T S+EW+PGQPR
Sbjct: 2 VMASSSGLRSCSAVGVPSLLAPSSRSGRL-APFCANA---TTSGRVTM--SAEWMPGQPR 55
Query: 226 PAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVD 405
PAHLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPGIL+PEALGLGNWV
Sbjct: 56 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEALGLGNWVK 115
Query: 406 AQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI*P 585
AQ+WAA PGG ATYLG PVPWG L R E DPE++KYPG A P
Sbjct: 116 AQEWAAVPGGQATYLGAPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDP 175
Query: 586 SWF 594
F
Sbjct: 176 LGF 178
Score = 56.2 bits (134), Expect(2) = 2e-62
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLGFSKD KFEEYK+KE+KNGRLA
Sbjct: 170 GGAFDPLGFSKDPAKFEEYKLKEIKNGRLA 199
>tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza
sativa GN=Cab26 PE=2 SV=1
Length = 241
Score = 206 bits (523), Expect(2) = 8e-62
Identities = 105/181 (58%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
Frame = +1
Query: 55 MASTSM-ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 231
MA++ + +CS VP+L P L ++A + R+T S+EW+PGQPRPA
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA-----TTSGRVTM--SAEWMPGQPRPA 53
Query: 232 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 411
HLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ
Sbjct: 54 HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQ 113
Query: 412 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI*PSW 591
+WAA PGG ATYLGNPVPWG L R E DPE++KYPG A P
Sbjct: 114 EWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLG 173
Query: 592 F 594
F
Sbjct: 174 F 174
Score = 55.8 bits (133), Expect(2) = 8e-62
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLGFSKD KFEEYK+KE+KNGRLA
Sbjct: 166 GGAFDPLGFSKDPVKFEEYKLKEIKNGRLA 195
>tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subsp.
japonica GN=P0578B12.4 PE=2 SV=1
Length = 241
Score = 206 bits (523), Expect(2) = 8e-62
Identities = 105/181 (58%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
Frame = +1
Query: 55 MASTSM-ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 231
MA++ + +CS VP+L P L ++A + R+T S+EW+PGQPRPA
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA-----TTSGRVTM--SAEWMPGQPRPA 53
Query: 232 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 411
HLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ
Sbjct: 54 HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQ 113
Query: 412 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI*PSW 591
+WAA PGG ATYLGNPVPWG L R E DPE++KYPG A P
Sbjct: 114 EWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLG 173
Query: 592 F 594
F
Sbjct: 174 F 174
Score = 55.8 bits (133), Expect(2) = 8e-62
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLGFSKD KFEEYK+KE+KNGRLA
Sbjct: 166 GGAFDPLGFSKDPVKFEEYKLKEIKNGRLA 195
>tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_22755 PE=4 SV=1
Length = 241
Score = 206 bits (523), Expect(2) = 8e-62
Identities = 105/181 (58%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
Frame = +1
Query: 55 MASTSM-ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPA 231
MA++ + +CS VP+L P L ++A + R+T S+EW+PGQPRPA
Sbjct: 1 MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA-----TTSGRVTM--SAEWMPGQPRPA 53
Query: 232 HLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQ 411
HLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ
Sbjct: 54 HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQ 113
Query: 412 KWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI*PSW 591
+WAA PGG ATYLGNPVPWG L R E DPE++KYPG A P
Sbjct: 114 EWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLG 173
Query: 592 F 594
F
Sbjct: 174 F 174
Score = 55.8 bits (133), Expect(2) = 8e-62
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLGFSKD KFEEYK+KE+KNGRLA
Sbjct: 166 GGAFDPLGFSKDPVKFEEYKLKEIKNGRLA 195
>tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding protein
OS=Phyllostachys edulis GN=Lhca1 PE=2 SV=1
Length = 246
Score = 206 bits (525), Expect(2) = 2e-61
Identities = 108/183 (59%), Positives = 121/183 (66%), Gaps = 2/183 (1%)
Frame = +1
Query: 52 AMASTS--MACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPR 225
AMAS+S +CS VP+L P +S G P A A + R+T S+EW PGQPR
Sbjct: 2 AMASSSGLRSCSAVGVPSLLAPSSRSGRSGLPFCAYA---TTSGRVTM--SAEWFPGQPR 56
Query: 226 PAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVD 405
PAHLDGSSPGDFGFDPLGL VPENF RFKESE+ HCRWAML VPG+L+PEALGLGNWV
Sbjct: 57 PAHLDGSSPGDFGFDPLGLGTVPENFERFKESEVYHCRWAMLCVPGVLVPEALGLGNWVK 116
Query: 406 AQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI*P 585
AQ+WAA PGG ATY G PVPWGNL R E DPE++KYPG A P
Sbjct: 117 AQEWAAVPGGQATYFGVPVPWGNLPTILAIEFLAIAFAEHQRTMEKDPEKKKYPGGAFDP 176
Query: 586 SWF 594
F
Sbjct: 177 LGF 179
Score = 53.5 bits (127), Expect(2) = 2e-61
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLGFSKD K EEYK+KE+KNGRLA
Sbjct: 171 GGAFDPLGFSKDPVKLEEYKLKEIKNGRLA 200
>tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea
mays PE=2 SV=1
Length = 249
Score = 204 bits (520), Expect(2) = 1e-60
Identities = 109/184 (59%), Positives = 123/184 (66%), Gaps = 3/184 (1%)
Frame = +1
Query: 52 AMASTSM---ACSHQLVPALSVPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQP 222
AMAS+S +CS VP+L P S A A ++G R+T S+EW+PGQP
Sbjct: 2 AMASSSSGLRSCSALGVPSLLAPSTSSSSRSGRLPFCAHATTSG-RVTM--SAEWMPGQP 58
Query: 223 RPAHLDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWV 402
RPAHLDGSSPGDFGFDPLGLA VPENF RFKESE+ HCRWAMLAVPG+L+PEALGLGNWV
Sbjct: 59 RPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWV 118
Query: 403 DAQKWAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI* 582
AQ+WAA PGG ATYLG PVPWG L R E DPE++KYPG A
Sbjct: 119 KAQEWAAVPGGQATYLGAPVPWGTLPTILAVEFVAIAFAEHQRTMEKDPEKKKYPGGAFD 178
Query: 583 PSWF 594
P F
Sbjct: 179 PLGF 182
Score = 52.8 bits (125), Expect(2) = 1e-60
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLGFS+D K EEYK+KE+KNGRLA
Sbjct: 174 GGAFDPLGFSRDPAKLEEYKLKEIKNGRLA 203
>tr|B7FH03|B7FH03_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 282
Score = 199 bits (507), Expect(2) = 6e-60
Identities = 103/177 (58%), Positives = 120/177 (67%), Gaps = 5/177 (2%)
Frame = +1
Query: 70 MACSHQLVPALS-----VPLPKSRFLGAPSFAPALACSNGSRLTCMASSEWLPGQPRPAH 234
MAC+ + A+S + KSRF + P A +N S M +S+W+PGQPRP++
Sbjct: 1 MACNTLMSSAISAFPSLLSSSKSRFSTSLPL-PCTASTNASSRFTM-TSDWMPGQPRPSY 58
Query: 235 LDGSSPGDFGFDPLGLAEVPENFARFKESELIHCRWAMLAVPGILLPEALGLGNWVDAQK 414
LDGS+PGDFGFDPL L EVPEN RFKESELIHCRWAMLAVPGIL+PEALGLGNWV AQ+
Sbjct: 59 LDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 118
Query: 415 WAATPGGHATYLGNPVPWGNLXXXXXXXXXXXXXXXXLRNEENDPERRKYPGWAI*P 585
WAA PGG ATYLGNPVPWG L R+ E DPE++KYPG A P
Sbjct: 119 WAALPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDP 175
Score = 55.8 bits (133), Expect(2) = 6e-60
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +2
Query: 569 GGPFDPLGFSKDVKKFEEYKVKELKNGRLA 658
GG FDPLG+SKD KKF EYK+KE+KNGRLA
Sbjct: 170 GGAFDPLGYSKDPKKFHEYKIKEVKNGRLA 199
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