DK952810
Clone id TST38A01NGRL0015_B18
Library
Length 609
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_B18. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CGCTTTCGCGGGAGGACGCTATTCAGAGCACTCCAAGATTCGGAGAGCTGCCTCTTACTT
TAAGGGGAATGCCCGTACTTGGTGGTCCACGCTTCTATTAAGCAAGATTGTGCCAGTTAC
ATGGCTGAAATTCAAGAGGCTTTTTATTTCTTCTTGGTTGACTCAAGAGTTTGAGCGAGA
TATACGAGCTGCTTGGAACCATCTCCGGATGACCAAGAGCGATACAGTGAATTCTTATTG
TGAAAGATTCTGGAGCTCTTTTCTACCCGCCTCTTCATTCAAGAAGATCTCGTTCAGAGA
ACAGATTAAGCGGTTTACCTTGGGTCTACCTACAGAGATCCAAGATCACTGCTTGGAACA
GAAGTAGGCTTCTATTCAGGAGTTGATGAGTCATGCGAAGCGGGGCTTTGCCATTCACTC
TGGTAGTCTGACCTACCCCACAGATGAGGCCATGACACAACGAGCCGAATAGACTTCTGG
GAATGAAAGTAGAATGAAAAAGAGCAACCCAGAGAAAAAAAAAAAGGATGCACGACCCAA
GCTTACTCCTGAGGAGAGAGCTCGCTTCATCAGAGAGGGGAAGTGCTTTGGATGCGGGGA
ACATGGACA
■■Homology search results ■■ -
sp_hit_id A0PUK2
Definition sp|A0PUK2|ATPA_MYCUA ATP synthase subunit alpha OS=Mycobacterium ulcerans (strain Agy99)
Align length 57
Score (bit) 32.3
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952810|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_B18, 5'
(609 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A0PUK2|ATPA_MYCUA ATP synthase subunit alpha OS=Mycobacterium... 32 1.9
sp|Q6KCD5|NIPBL_MOUSE Nipped-B-like protein OS=Mus musculus GN=N... 32 3.3
sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=N... 32 3.3
sp|Q86WK9|MPRA_HUMAN Membrane progestin receptor alpha OS=Homo s... 31 5.6
sp|Q9KQ63|FLID_VIBCH Flagellar hook-associated protein 2 OS=Vibr... 31 5.6
sp|Q80ZE4|MPRA_MOUSE Membrane progestin receptor alpha OS=Mus mu... 30 7.4
sp|P0C6K7|NS1A_ANV1 Non-structural polyprotein 1A OS=Avian nephr... 30 9.6
sp|Q9JGF2|NS1AB_ANV1 Non-structural polyprotein 1AB OS=Avian nep... 30 9.6
sp|Q9BUN1|CA056_HUMAN Uncharacterized protein C1orf56 OS=Homo sa... 30 9.6

>sp|A0PUK2|ATPA_MYCUA ATP synthase subunit alpha OS=Mycobacterium
ulcerans (strain Agy99) GN=atpA PE=3 SV=1
Length = 549

Score = 32.3 bits (72), Expect = 1.9
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2

Query: 356 EQK*ASIQELMSHAKRGFAIHSGSLTYPTDEAMTQRAE*TSGNES-RMKKSNPEKKK 523
E+ ++ ++++H K+GFA +G P DE + E G ES ++KK P+KKK
Sbjct: 494 EETEEALTKVINHFKKGFASSTGESVVP-DEHVEAMDEEDLGKESVKVKKPAPQKKK 549


>sp|Q6KCD5|NIPBL_MOUSE Nipped-B-like protein OS=Mus musculus GN=Nipbl
PE=1 SV=1
Length = 2798

Score = 31.6 bits (70), Expect = 3.3
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2

Query: 437 PTDEAMTQRAE*TSGNE--SRMKKSNPEKKKKDARPKLTPEE 556
P+D M + S +E +MKK +KK+K PKLTPEE
Sbjct: 1145 PSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEE 1186


>sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein OS=Homo sapiens GN=NIPBL
PE=1 SV=2
Length = 2804

Score = 31.6 bits (70), Expect = 3.3
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2

Query: 437 PTDEAMTQRAE*TSGNE--SRMKKSNPEKKKKDARPKLTPEE 556
P+D M + S +E +MKK +KK+K PKLTPEE
Sbjct: 1151 PSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEE 1192


>sp|Q86WK9|MPRA_HUMAN Membrane progestin receptor alpha OS=Homo
sapiens GN=PAQR7 PE=2 SV=1
Length = 346

Score = 30.8 bits (68), Expect = 5.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3

Query: 580 PLSDEASSLLRSKLGSCILFFFLWVALFHSTFIPRSLFGSLCH 452
P +D+ + L C + FFL A F STF+P F CH
Sbjct: 231 PTTDDPALLYHK----CQVVFFLLAAAFFSTFMPERWFPGSCH 269


>sp|Q9KQ63|FLID_VIBCH Flagellar hook-associated protein 2 OS=Vibrio
cholerae GN=fliD PE=3 SV=1
Length = 666

Score = 30.8 bits (68), Expect = 5.6
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Frame = +2

Query: 419 SGSL--TYPTDEAMTQRAE*TSGNES-------RMKKSNPEKKKKDARPKLTPEERA 562
SG+L +Y T + Q+ E E R K PE+ K AR KL+PEERA
Sbjct: 343 SGTLLDSYVTPQEAQQKLEQKLAQEKAQIEAAIRSGKMTPEEAKAQARAKLSPEERA 399


>sp|Q80ZE4|MPRA_MOUSE Membrane progestin receptor alpha OS=Mus
musculus GN=Paqr7 PE=2 SV=2
Length = 345

Score = 30.4 bits (67), Expect = 7.4
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3

Query: 574 SDEASSLLRSKLGSCILFFFLWVALFHSTFIPRSLFGSLCH 452
++E +LL K C + FFL A F ST +P S F CH
Sbjct: 231 AEEDPALLYHK---CQVVFFLLAAAFFSTVMPESWFPGSCH 268


>sp|P0C6K7|NS1A_ANV1 Non-structural polyprotein 1A OS=Avian nephritis
virus 1 GN=ORF1 PE=3 SV=1
Length = 1005

Score = 30.0 bits (66), Expect = 9.6
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +2

Query: 437 PTDEAMTQRAE*TSGNESRMKKSNPEKKKKDARPKLTPEERARFIREGKCFGCGE 601
P +E + Q+ E E + + P ++K P P+ + + + KC CGE
Sbjct: 936 PKEEPVIQQVEQQPQVEQQQQPQQPVVEEKKRTPPPKPQRKPKTGAKAKCLDCGE 990


>sp|Q9JGF2|NS1AB_ANV1 Non-structural polyprotein 1AB OS=Avian
nephritis virus 1 GN=ORF1 PE=3 SV=1
Length = 1512

Score = 30.0 bits (66), Expect = 9.6
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +2

Query: 437 PTDEAMTQRAE*TSGNESRMKKSNPEKKKKDARPKLTPEERARFIREGKCFGCGE 601
P +E + Q+ E E + + P ++K P P+ + + + KC CGE
Sbjct: 936 PKEEPVIQQVEQQPQVEQQQQPQQPVVEEKKRTPPPKPQRKPKTGAKAKCLDCGE 990


>sp|Q9BUN1|CA056_HUMAN Uncharacterized protein C1orf56 OS=Homo
sapiens GN=C1orf56 PE=2 SV=1
Length = 341

Score = 30.0 bits (66), Expect = 9.6
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Frame = -2

Query: 503 SFSFYFHSQK-SIRLVVSWPHLWGRSDYQ--------SEWQSPASHDSSTPE*KPTSVPS 351
S F +SQ+ IRL S P GRS S+W +P S S P PT++PS
Sbjct: 136 STRFIANSQEPEIRLTSSLPRSPGRSTEDLPGSQATLSQWSTPGSTPSRWPSPSPTAMPS 195

Query: 350 SD 345
+
Sbjct: 196 PE 197


tr_hit_id Q5NRP7
Definition tr|Q5NRP7|Q5NRP7_SOLDE Putative gag-pol polyprotein, identical OS=Solanum demissum
Align length 128
Score (bit) 46.6
E-value 0.001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952810|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_B18, 5'
(609 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5NRP7|Q5NRP7_SOLDE Putative gag-pol polyprotein, identical O... 47 0.001
tr|Q5NRP4|Q5NRP4_SOLDE Putative gag-pol polyprotein, identical O... 47 0.001
tr|Q5JPX1|Q5JPX1_ORYSA OSJNBa0085C10.20 protein OS=Oryza sativa ... 46 0.001
tr|Q7Y1L4|Q7Y1L4_ORYSJ Putative polyprotein OS=Oryza sativa subs... 44 0.006
tr|Q75GC6|Q75GC6_ORYSJ Putative gag and pol polyprotein OS=Oryza... 44 0.006
tr|Q10JJ3|Q10JJ3_ORYSJ Retrotransposon protein, putative, Ty1-co... 44 0.006
tr|Q8SA93|Q8SA93_MAIZE Putative polyprotein OS=Zea mays GN=Z195D... 44 0.010
tr|Q0D6S9|Q0D6S9_ORYSJ Os07g0444200 protein OS=Oryza sativa subs... 43 0.012
tr|Q7XX43|Q7XX43_ORYSJ OSJNBa0059D20.6 protein OS=Oryza sativa s... 42 0.021
tr|Q7XEF2|Q7XEF2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 42 0.021
tr|Q2QRQ2|Q2QRQ2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 42 0.021
tr|Q8W5B7|Q8W5B7_ORYSA Putative polyprotein OS=Oryza sativa GN=O... 41 0.047
tr|Q8H861|Q8H861_ORYSJ Putative polyprotein OS=Oryza sativa subs... 41 0.047
tr|Q5W6K0|Q5W6K0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 41 0.047
tr|Q10GH3|Q10GH3_ORYSJ Retrotransposon protein, putative, Ty3-gy... 41 0.047
tr|Q109Z1|Q109Z1_ORYSJ Retrotransposon protein, putative, Ty3-gy... 41 0.047
tr|Q7XQZ3|Q7XQZ3_ORYSJ OSJNBb0045P24.9 protein OS=Oryza sativa s... 40 0.11
tr|Q53M39|Q53M39_ORYSJ Retrotransposon protein, putative, Ty3-gy... 40 0.14
tr|Q53JK4|Q53JK4_ORYSJ Retrotransposon protein, putative, Ty3-gy... 40 0.14
tr|Q2QSZ8|Q2QSZ8_ORYSJ Retrotransposon protein, putative, Ty3-gy... 40 0.14
tr|B6KHW5|B6KHW5_TOXGO Putative uncharacterized protein OS=Toxop... 40 0.14
tr|Q9ZPF9|Q9ZPF9_ARATH Putative polyprotein OS=Arabidopsis thali... 39 0.18
tr|Q9SK57|Q9SK57_ARATH Putative retroelement pol polyprotein OS=... 39 0.18
tr|Q2RBB2|Q2RBB2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 39 0.18
tr|Q2QYP3|Q2QYP3_ORYSJ Retrotransposon protein, putative, Ty3-gy... 39 0.18
tr|Q2QUR6|Q2QUR6_ORYSJ Retrotransposon protein, putative, Ty3-gy... 39 0.18
tr|Q0ZLH4|Q0ZLH4_9ORYZ Polyprotein OS=Oryza australiensis PE=4 SV=1 39 0.18
tr|Q0DJL7|Q0DJL7_ORYSJ Os05g0263200 protein OS=Oryza sativa subs... 39 0.18
tr|A4K7M3|A4K7M3_ORYSJ Putative polyprotein OS=Oryza sativa subs... 39 0.18
tr|A3C075|A3C075_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.18

>tr|Q5NRP7|Q5NRP7_SOLDE Putative gag-pol polyprotein, identical
OS=Solanum demissum GN=SDM1_58t00003 PE=4 SV=1
Length = 1588

Score = 46.6 bits (109), Expect = 0.001
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Frame = +2

Query: 20 YSEHSKIRRAASYFKGNARTWWSTL----LLSKIVPV-TWLKFKRLFISSWLTQEFERDI 184
YSE K++ A F A +WW L L ++ P+ TW + KR+ ++ F+RD+
Sbjct: 149 YSEGKKVKLAVVEFSDYAASWWKKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDL 208

Query: 185 RAAWNHLRMTKSDTVNSYCERFWSSFLPASSFKKISFREQIKRFTLGLPTEIQDHCLEQK 364
++ L+ S +V+ Y + + + A+ ++ I RF GL TEI + Q+
Sbjct: 209 QSRLQRLKQ-GSMSVDEYFKSMDMAMIQANCMEE--EEATIARFLNGLNTEIANVVEIQQ 265

Query: 365 *ASIQELM 388
++ EL+
Sbjct: 266 YVTLDELV 273


>tr|Q5NRP4|Q5NRP4_SOLDE Putative gag-pol polyprotein, identical
OS=Solanum demissum GN=SDM1_58t00004 PE=4 SV=1
Length = 1588

Score = 46.6 bits (109), Expect = 0.001
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Frame = +2

Query: 20 YSEHSKIRRAASYFKGNARTWWSTL----LLSKIVPV-TWLKFKRLFISSWLTQEFERDI 184
YSE K++ A F A +WW L L ++ P+ TW + KR+ ++ F+RD+
Sbjct: 149 YSEGKKVKLAVVEFSDYAASWWKKLARDRLQEELPPIATWAEMKRVMRKRFIPSYFQRDL 208

Query: 185 RAAWNHLRMTKSDTVNSYCERFWSSFLPASSFKKISFREQIKRFTLGLPTEIQDHCLEQK 364
++ L+ S +V+ Y + + + A+ ++ I RF GL TEI + Q+
Sbjct: 209 QSRLQRLKQ-GSMSVDEYFKSMDMAMIQANCMEE--EEATIARFLNGLNTEIANVVEIQQ 265

Query: 365 *ASIQELM 388
++ EL+
Sbjct: 266 YVTLDELV 273


>tr|Q5JPX1|Q5JPX1_ORYSA OSJNBa0085C10.20 protein OS=Oryza sativa
GN=OSJNBa0085C10.20 PE=4 SV=1
Length = 242

Score = 46.2 bits (108), Expect = 0.001
Identities = 29/113 (25%), Positives = 48/113 (42%)
Frame = +2

Query: 26 EHSKIRRAASYFKGNARTWWSTLLLSKIVPVTWLKFKRLFISSWLTQEFERDIRAAWNHL 205
E ++R+A+S FK A WW+ L ++P TW + K ++ + RD+R L
Sbjct: 78 EQHRVRQASSEFKDFAIMWWAGLSDEGVLPTTWEELKVAMRDRFVPPSYHRDLRKKLMRL 137

Query: 206 RMTKSDTVNSYCERFWSSFLPASSFKKISFREQIKRFTLGLPTEIQDHCLEQK 364
+ Y R +KK + Q+ RF + E+Q H Q+
Sbjct: 138 EQRDKSVQDYYGLR--EEIQNIVDYKKFNSVNQLFRFAMLAEKELQGHASGQE 188


>tr|Q7Y1L4|Q7Y1L4_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica GN=OSJNBb0056B16.15 PE=4 SV=1
Length = 1494

Score = 44.3 bits (103), Expect = 0.006
Identities = 32/131 (24%), Positives = 56/131 (42%)
Frame = +2

Query: 5 FAGGRYSEHSKIRRAASYFKGNARTWWSTLLLSKIVPVTWLKFKRLFISSWLTQEFERDI 184
F+ + ++R+A+S FK A WW+ L I+P TW + K ++ + RD+
Sbjct: 150 FSAHLVPDQHRVRQASSEFKDFAIMWWARLADDGILPTTWKELKVAMRDIFVPPSYLRDL 209

Query: 185 RAAWNHLRMTKSDTVNSYCERFWSSFLPASSFKKISFREQIKRFTLGLPTEIQDHCLEQK 364
L + +V Y + S K + I RF +GL +IQD ++
Sbjct: 210 SKKLMRLEQ-RDKSVQDYYGELQKGLMRCSIVK--GTEDSICRFYMGLRRKIQDIVDNKE 266

Query: 365 *ASIQELMSHA 397
++ +L A
Sbjct: 267 FNTVNQLFQFA 277


>tr|Q75GC6|Q75GC6_ORYSJ Putative gag and pol polyprotein OS=Oryza
sativa subsp. japonica GN=OSJNBb0028K20.2 PE=4 SV=1
Length = 1427

Score = 44.3 bits (103), Expect = 0.006
Identities = 32/131 (24%), Positives = 56/131 (42%)
Frame = +2

Query: 5 FAGGRYSEHSKIRRAASYFKGNARTWWSTLLLSKIVPVTWLKFKRLFISSWLTQEFERDI 184
F+ + ++R+A+S FK A WW+ L I+P TW + K ++ + RD+
Sbjct: 150 FSAHLVPDQHRVRQASSEFKDFAIMWWARLADDGILPTTWKELKVAMRDIFVPPSYLRDL 209

Query: 185 RAAWNHLRMTKSDTVNSYCERFWSSFLPASSFKKISFREQIKRFTLGLPTEIQDHCLEQK 364
L + +V Y + S K + I RF +GL +IQD ++
Sbjct: 210 SKKLMRLEQ-RDKSVQDYYGELQKGLMRCSIVK--GTEDSICRFYMGLRRKIQDIVDNKE 266

Query: 365 *ASIQELMSHA 397
++ +L A
Sbjct: 267 FNTVNQLFQFA 277


>tr|Q10JJ3|Q10JJ3_ORYSJ Retrotransposon protein, putative, Ty1-copia
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os03g30450 PE=4 SV=1
Length = 1543

Score = 44.3 bits (103), Expect = 0.006
Identities = 32/131 (24%), Positives = 56/131 (42%)
Frame = +2

Query: 5 FAGGRYSEHSKIRRAASYFKGNARTWWSTLLLSKIVPVTWLKFKRLFISSWLTQEFERDI 184
F+ + ++R+A+S FK A WW+ L I+P TW + K ++ + RD+
Sbjct: 173 FSAHLVPDQHRVRQASSEFKDFAIMWWARLADDGILPTTWKELKVAMRDIFVPPSYLRDL 232

Query: 185 RAAWNHLRMTKSDTVNSYCERFWSSFLPASSFKKISFREQIKRFTLGLPTEIQDHCLEQK 364
L + +V Y + S K + I RF +GL +IQD ++
Sbjct: 233 SKKLMRLEQ-RDKSVQDYYGELQKGLMRCSIVK--GTEDSICRFYMGLRRKIQDIVDNKE 289

Query: 365 *ASIQELMSHA 397
++ +L A
Sbjct: 290 FNTVNQLFQFA 300


>tr|Q8SA93|Q8SA93_MAIZE Putative polyprotein OS=Zea mays GN=Z195D10.9
PE=4 SV=1
Length = 2749

Score = 43.5 bits (101), Expect = 0.010
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 10/209 (4%)
Frame = +2

Query: 5 FAGGRYSEHSKIRRAASYFKGNARTWWSTLLLSKIVPVTWLKFKRLFISSWLTQEFERDI 184
F G R + A+ + KG A+TW+ L + +P TW +FK + T F +
Sbjct: 495 FRGQRTLVTDRTWLASYHLKGAAQTWYYALEQDEGMP-TWGRFKEV-----CTLRFGPPV 548

Query: 185 RAAW--NHLRMTKSDTVNSYCERFWSSFLPASSFKKISFREQIKRFTLGLPTEIQDHCLE 358
R R+ + TV Y +RF + +K+ +++ + F GLP I+
Sbjct: 549 RGTRLSELARLPFTSTVQDYADRFNAML---GHTRKLDAQQKAELFVGGLPDHIRADVAI 605

Query: 359 QK*ASIQELMSHAKRGFAIHSGSLTYPTDEAMTQRAE*TSGNESR------MKKSNPEKK 520
+ +Q M + R F + + T P +++ R + P
Sbjct: 606 RDPQDLQSAM-YLARAFEQRAAAQTTPPPARGFRQSRPGLPAPPRPLTAPPTAAAQPAGT 664

Query: 521 KKDARP--KLTPEERARFIREGKCFGCGE 601
ARP +LTP E+ R+G CF C E
Sbjct: 665 AAPARPFRRLTPAEQQERRRQGLCFNCDE 693


>tr|Q0D6S9|Q0D6S9_ORYSJ Os07g0444200 protein OS=Oryza sativa subsp.
japonica GN=Os07g0444200 PE=4 SV=1
Length = 1316

Score = 43.1 bits (100), Expect = 0.012
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 28/225 (12%)
Frame = +2

Query: 17 RYSEHSKIRRAASYFKGNARTWWSTLLLSK---IVPVTWLKFKRLFISSWLTQEFERDIR 187
R E K+ AA+ +G A WW T ++ V W +F F +++ R
Sbjct: 83 RVREADKVIFAANQLEGPAGDWWDTYKEAREEDAVEPNWEEFTTAFRDNFVPAAVMRMKN 142

Query: 188 AAWNHLRMTKSDTVNSYCERFWSSFLPASSFKKISFREQIKRFTLGLPTEIQDHCLEQK* 367
+ L+ + TV Y RF + ++ E+I +F GL E++ + Q
Sbjct: 143 NEFRRLQQGNT-TVQEYLNRF-TQLARYATRDLADEEEKIDKFIEGLNDELRGPMIGQDH 200

Query: 368 ASIQELMS--------------HAKRGFAIHSGSLTYPTDEAMTQRAE*TSGNESR---M 496
S Q L++ + KR A++ T P QR + T+ + R +
Sbjct: 201 DSFQSLINKVVRLENDRKVVEHNRKRRLAMNRSPQTAP------QRPKGTTSSAWRPTVV 254

Query: 497 KKSNPEKKKKDARPKLTPEERARF--------IREGKCFGCGEHG 607
S P RP +T + RA +R G CF CGE+G
Sbjct: 255 TTSRPAASSNFHRP-VTIQNRAPAPNQAATGSVRPGSCFNCGEYG 298


>tr|Q7XX43|Q7XX43_ORYSJ OSJNBa0059D20.6 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0059D20.6 PE=4 SV=2
Length = 1470

Score = 42.4 bits (98), Expect = 0.021
Identities = 55/224 (24%), Positives = 87/224 (38%), Gaps = 27/224 (12%)
Frame = +2

Query: 17 RYSEHSKIRRAASYFKGNARTWWSTLLLSKIVPV---TWLKFKRLFISSWLTQEFERDIR 187
R E K+ AA+ +G A WW T ++ W +F F +++ R +
Sbjct: 83 RVREADKVIFAANQLEGPAGDWWDTYKEAREEDAGEPNWEEFTTAFRDNFVPAAVMRMKK 142

Query: 188 AAWNHLRMTKSDTVNSYCERFWSSFLPASSFKKISFREQIKRFTLGLPTEIQDHCLEQK* 367
+ LR + TV Y RF + ++ E+I +F GL E++ + Q
Sbjct: 143 NEFRKLRQGNT-TVQEYLNRF-TQLARYATRDLADEEEKIDKFIEGLNDELRGPMIGQDH 200

Query: 368 ASIQELMS--------------HAKRGFAIHSGSLTYPTDEAMTQRAE*TSGNESR---M 496
S Q L++ + KR A++ T P QR + T+ + R +
Sbjct: 201 DSFQSLINKVVRLENDRKVVEHNRKRRLAMNRPPQTAP------QRPKGTTPSAWRPTVV 254

Query: 497 KKSNPEKKKKDARPKL------TPEERAR-FIREGKCFGCGEHG 607
S P RP TP + A +R G CF CGE+G
Sbjct: 255 TTSRPAASSNFHRPVTIQNRAPTPNQAATGSVRPGSCFNCGEYG 298


>tr|Q7XEF2|Q7XEF2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os10g28930 PE=4 SV=1
Length = 1470

Score = 42.4 bits (98), Expect = 0.021
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 28/225 (12%)
Frame = +2

Query: 17 RYSEHSKIRRAASYFKGNARTWWSTLLLSKIVPV---TWLKFKRLFISSWLTQEFERDIR 187
R E K+ AA+ +G A WW T ++ W +F F +++ R +
Sbjct: 83 RVREADKVIFAANQLEGPAGDWWDTYKEAREEDAGEPNWEEFTTAFRDNFVPAAVMRMKK 142

Query: 188 AAWNHLRMTKSDTVNSYCERFWSSFLPASSFKKISFREQIKRFTLGLPTEIQDHCLEQK* 367
+ LR + TV Y RF + ++ E+I +F GL E++ + Q
Sbjct: 143 NEFRRLRQGNT-TVQEYLNRF-TQLARYATRDLADEEEKIDKFIEGLNDELRGPMIGQDH 200

Query: 368 ASIQELMS--------------HAKRGFAIHSGSLTYPTDEAMTQRAE*TSGNESR---M 496
S Q L++ + KR A++ T P QR + T+ + R +
Sbjct: 201 DSFQSLINKVVRLENDRKVVEHNRKRRLAMNRTPQTAP------QRPKWTTSSAWRPTVV 254

Query: 497 KKSNPEKKKKDARPKLTPEERARF--------IREGKCFGCGEHG 607
S P RP +T + RA +R G CF CGE+G
Sbjct: 255 TTSRPAASSNFHRP-VTIQNRAPAPNQAATGSVRPGSCFNCGEYG 298