DK952811
Clone id TST38A01NGRL0015_B19
Library
Length 651
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_B19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GAAAAAACTTTATTCTTCTTTCAAGTAAATGTGAGAATTTGATTTAGATATAGTTAGATT
TTAAGTAGTAAAGCTGGTGAGGATAAAGGCAAGTAGGTAGGGAAATAAAAAATTGATAAG
AAGGAGGATTCCAATGCAACATGTAAAAATATATCTTTCCACAGCCCCTGTTGTAGCTAC
AATATGGTTTGGCTTACTGGCTGGTTTATTAATAGAAATAAATCGATTCTTTCCGGATGC
TTTATTATTTCCATTTCCCTAACTTATTGTTATTAACTAAACCAAAGGAGCCGTGTAGGA
ACCATACGAAGTGAGAACTCTATGGTTCGTCATACACGTAATAATGACTCAATTTAGTGA
TGGGAGTGTTTAATCTATTTACTTCATAGGTCGAAACTTCGTAAGTAGTTCGTTTCTATT
GCTATGGATCTACATGCGACCCTCACCCCCTCTTTTTGGGGAAACTAATTAAATTAGAGT
ACATCTGATTCCATGGCCAATACTAAAGATGCAAGGGTAACTATTGCTTTGGAATGTACA
AGTTGTATTCAGAGAAAAACCAGTGGAAAATCCGCGGGTCTTTGCCGATACACTACACGT
AAAAATCGTCGTAACACACCCGCTCGGCTGGAGTTAGAGAAGTATTGCTTC
■■Homology search results ■■ -
sp_hit_id Q85FK1
Definition sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic OS=Adiantum capillus-veneris
Align length 53
Score (bit) 112.0
E-value 2.0e-24
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952811|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_B19, 5'
(651 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic OS... 112 2e-24
sp|B2XWM6|RK33_FAGEA 50S ribosomal protein L33, chloroplastic OS... 73 1e-12
sp|Q09WZ6|RK33_MORIN 50S ribosomal protein L33, chloroplastic OS... 73 1e-12
sp|B1VKE2|RK33_CRYJA 50S ribosomal protein L33, chloroplastic OS... 73 1e-12
sp|Q2L929|RK33_GOSHI 50S ribosomal protein L33, chloroplastic OS... 72 3e-12
sp|A0ZZ56|RK33_GOSBA 50S ribosomal protein L33, chloroplastic OS... 72 3e-12
sp|B1A956|RK33_CARPA 50S ribosomal protein L33, chloroplastic OS... 72 3e-12
sp|A4QLC7|RK33_LEPVR 50S ribosomal protein L33, chloroplastic OS... 72 3e-12
sp|A4QL40|RK33_DRANE 50S ribosomal protein L33, chloroplastic OS... 72 3e-12
sp|A4QKV2|RK33_CRUWA 50S ribosomal protein L33, chloroplastic OS... 72 3e-12
sp|A4QKL3|RK33_CAPBU 50S ribosomal protein L33, chloroplastic OS... 72 3e-12
sp|A4QKC6|RK33_BARVE 50S ribosomal protein L33, chloroplastic OS... 72 3e-12
sp|A4QK39|RK33_ARAHI 50S ribosomal protein L33, chloroplastic OS... 72 3e-12
sp|A4QJV2|RK33_OLIPU 50S ribosomal protein L33, chloroplastic OS... 70 7e-12
sp|A4QLV4|RK33_NASOF 50S ribosomal protein L33, chloroplastic OS... 70 7e-12
sp|P56796|RK33_ARATH 50S ribosomal protein L33, chloroplastic OS... 70 7e-12
sp|A4GYT2|RK33_POPTR 50S ribosomal protein L33, chloroplastic OS... 70 1e-11
sp|Q14FD6|RK33_POPAL 50S ribosomal protein L33, chloroplastic OS... 70 1e-11
sp|A4QLL5|RK33_LOBMA 50S ribosomal protein L33, chloroplastic OS... 70 1e-11
sp|A2T354|RK33_ANGEV 50S ribosomal protein L33, chloroplastic OS... 70 1e-11
sp|Q0ZIZ9|RK33_VITVI 50S ribosomal protein L33, chloroplastic OS... 69 2e-11
sp|P30068|RK33_EPIVI 50S ribosomal protein L33, plastid OS=Epifa... 69 2e-11
sp|Q2QD68|RK33_CUCSA 50S ribosomal protein L33, chloroplastic OS... 69 2e-11
sp|A4QJD6|RK33_AETCO 50S ribosomal protein L33, chloroplastic OS... 69 2e-11
sp|A4QJM0|RK33_AETGR 50S ribosomal protein L33, chloroplastic OS... 69 3e-11
sp|Q3V514|RK33_ACOCL 50S ribosomal protein L33, chloroplastic OS... 69 3e-11
sp|P06393|RK33_TOBAC 50S ribosomal protein L33, chloroplastic OS... 68 4e-11
sp|P41612|RK33_PINTH 50S ribosomal protein L33, chloroplastic OS... 68 4e-11
sp|Q7GUD1|RK33_PINKO 50S ribosomal protein L33, chloroplastic OS... 68 4e-11
sp|Q33C11|RK33_NICTO 50S ribosomal protein L33, chloroplastic OS... 68 4e-11

>sp|Q85FK1|RK33_ADICA 50S ribosomal protein L33, chloroplastic
OS=Adiantum capillus-veneris GN=rpl33 PE=2 SV=2
Length = 66

Score = 112 bits (279), Expect = 2e-24
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYCF 651
MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYCF
Sbjct: 1 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYCF 53


>sp|B2XWM6|RK33_FAGEA 50S ribosomal protein L33, chloroplastic
OS=Fagopyrum esculentum subsp. ancestrale GN=rpl33 PE=3
SV=1
Length = 66

Score = 73.2 bits (178), Expect = 1e-12
Identities = 31/52 (59%), Positives = 42/52 (80%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KDARV++ LECTSC+++ + +S G+ RY T+KNRRNTP+RLEL K+C
Sbjct: 1 MAKGKDARVSVILECTSCVRKNVNKESRGISRYITQKNRRNTPSRLELRKFC 52


>sp|Q09WZ6|RK33_MORIN 50S ribosomal protein L33, chloroplastic
OS=Morus indica GN=rpl33 PE=3 SV=1
Length = 66

Score = 72.8 bits (177), Expect = 1e-12
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KDARVTI LECTSC++ + + +S G+ RY T+KNR NTP+RLEL K+C
Sbjct: 1 MAKGKDARVTIILECTSCLRNRVNKESRGISRYITQKNRHNTPSRLELRKFC 52


>sp|B1VKE2|RK33_CRYJA 50S ribosomal protein L33, chloroplastic
OS=Cryptomeria japonica GN=rpl33 PE=3 SV=1
Length = 66

Score = 72.8 bits (177), Expect = 1e-12
Identities = 34/52 (65%), Positives = 39/52 (75%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA + RVTI LECTSC Q + KS G+ RYTTRKNRRNTP RLEL+K+C
Sbjct: 1 MAKGGNVRVTITLECTSCTQDSVNKKSPGISRYTTRKNRRNTPLRLELKKFC 52


>sp|Q2L929|RK33_GOSHI 50S ribosomal protein L33, chloroplastic
OS=Gossypium hirsutum GN=rpl33 PE=3 SV=1
Length = 66

Score = 72.0 bits (175), Expect = 3e-12
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA +KD RVTI LECTSC++ + +S G+ RY T+KNR NTP+RLEL+K+C
Sbjct: 1 MAKSKDVRVTIILECTSCVRNGVNKESTGISRYITQKNRHNTPSRLELKKFC 52


>sp|A0ZZ56|RK33_GOSBA 50S ribosomal protein L33, chloroplastic
OS=Gossypium barbadense GN=rpl33 PE=3 SV=1
Length = 66

Score = 72.0 bits (175), Expect = 3e-12
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA +KD RVTI LECTSC++ + +S G+ RY T+KNR NTP+RLEL+K+C
Sbjct: 1 MAKSKDVRVTIILECTSCVRNGVNKESTGISRYITQKNRHNTPSRLELKKFC 52


>sp|B1A956|RK33_CARPA 50S ribosomal protein L33, chloroplastic
OS=Carica papaya GN=rpl33 PE=3 SV=1
Length = 66

Score = 72.0 bits (175), Expect = 3e-12
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KDARVTI LECTSC++ + +S G+ RY T+KNR NTP+RLEL K+C
Sbjct: 1 MAKGKDARVTIILECTSCVRNGVNKESTGISRYITQKNRHNTPSRLELRKFC 52


>sp|A4QLC7|RK33_LEPVR 50S ribosomal protein L33, chloroplastic
OS=Lepidium virginicum GN=rpl33 PE=3 SV=1
Length = 66

Score = 71.6 bits (174), Expect = 3e-12
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KD RVTI LECTSC++ +SAG+ RY T+KNR NTP+RLEL K+C
Sbjct: 1 MAKGKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHNTPSRLELRKFC 52


>sp|A4QL40|RK33_DRANE 50S ribosomal protein L33, chloroplastic
OS=Draba nemorosa GN=rpl33 PE=3 SV=1
Length = 66

Score = 71.6 bits (174), Expect = 3e-12
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KD RVTI LECTSC++ +SAG+ RY T+KNR NTP+RLEL K+C
Sbjct: 1 MAKGKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHNTPSRLELRKFC 52


>sp|A4QKV2|RK33_CRUWA 50S ribosomal protein L33, chloroplastic
OS=Crucihimalaya wallichii GN=rpl33 PE=3 SV=1
Length = 66

Score = 71.6 bits (174), Expect = 3e-12
Identities = 32/52 (61%), Positives = 39/52 (75%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KD RVTI LECTSC++ +SAG+ RY T+KNR NTP+RLEL K+C
Sbjct: 1 MAKGKDVRVTIILECTSCVRNDIKKESAGISRYITQKNRHNTPSRLELRKFC 52


tr_hit_id B7ZIQ6
Definition tr|B7ZIQ6|B7ZIQ6_KETDA Ribosomal protein L33 OS=Keteleeria davidiana
Align length 52
Score (bit) 72.4
E-value 2.0e-11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952811|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_B19, 5'
(651 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7ZIQ6|B7ZIQ6_KETDA Ribosomal protein L33 OS=Keteleeria david... 72 2e-11
tr|B8R469|B8R469_TRISU Ribosomal protein L33 OS=Trifolium subter... 70 1e-10
tr|A7QCX0|A7QCX0_VITVI 50S ribosomal protein L33 OS=Vitis vinife... 69 2e-10
tr|B5AH23|B5AH23_9ROSI Ribosomal protein L33 OS=Gonystylus banca... 69 3e-10
tr|Q4FG92|Q4FG92_ACOAM 50S ribosomal protein L33 (Fragment) OS=A... 69 3e-10
tr|Q06R44|Q06R44_9LAMI 50S ribosomal protein L33 OS=Forsythia eu... 69 3e-10
tr|Q06QZ1|Q06QZ1_9LAMI 50S ribosomal protein L33 OS=Jasminum aby... 69 3e-10
tr|B2D074|B2D074_OLEEU Ribosomal protein L33 OS=Olea europaea GN... 69 3e-10
tr|Q4FG87|Q4FG87_9ASPA 50S ribosomal protein L33 (Fragment) OS=Y... 68 4e-10
tr|B3IWG9|B3IWG9_TAKLE Ribosomal protein L33 OS=Takakia lepidozi... 68 4e-10
tr|Q4FG88|Q4FG88_TYPLA 50S ribosomal protein L33 (Fragment) OS=T... 67 7e-10
tr|B7UCF6|B7UCF6_9POAL Rpl33 OS=Typha domingensis PE=4 SV=1 67 7e-10
tr|A9QC76|A9QC76_TRACE 50S ribosomal protein L33 (Fragment) OS=T... 67 7e-10
tr|Q4FG91|Q4FG91_GINBI 50S ribosomal protein L33 (Fragment) OS=G... 66 2e-09
tr|B0LP34|B0LP34_9CARY 50S ribosomal protein L33 OS=Silene aegyp... 66 2e-09
tr|B0LNQ8|B0LNQ8_SILLA 50S ribosomal protein L33 OS=Silene latif... 66 2e-09
tr|A9QC02|A9QC02_9ASTR 50S ribosomal protein L33 (Fragment) OS=S... 66 2e-09
tr|A9QBK7|A9QBK7_MUSAC 50S ribosomal protein L33 (Fragment) OS=M... 66 2e-09
tr|A9QAW1|A9QAW1_9APIA 50S ribosomal protein L33 (Fragment) OS=A... 66 2e-09
tr|Q4FG89|Q4FG89_RANMC 50S ribosomal protein L33 (Fragment) OS=R... 65 3e-09
tr|B4Y1V2|B4Y1V2_VISVU Ribosomal protein L33 (Fragment) OS=Visca... 65 3e-09
tr|B4Y1W1|B4Y1W1_AGRGI Ribosomal protein L33 OS=Agrostemma githa... 65 5e-09
tr|B6RRU3|B6RRU3_9CARY Ribosomal protein L33 OS=Eudianthe laeta ... 64 6e-09
tr|B0LN85|B0LN85_LYCCH 50S ribosomal protein L33 OS=Lychnis chal... 64 6e-09
tr|B4Y1V9|B4Y1V9_9CARY Ribosomal protein L33 OS=Atocion rupestre... 64 8e-09
tr|B4Y1V7|B4Y1V7_9CARY Ribosomal protein L33 OS=Lychnis flos-cuc... 64 8e-09
tr|B4Y1V5|B4Y1V5_9CARY Ribosomal protein L33 OS=Lychnis flos-jov... 64 8e-09
tr|B4Y1V3|B4Y1V3_9CARY Ribosomal protein L33 OS=Petrocoptis pyre... 64 8e-09
tr|B0LP55|B0LP55_9CARY 50S ribosomal protein L33 OS=Silene atoci... 64 8e-09
tr|B0LP13|B0LP13_9CARY 50S ribosomal protein L33 OS=Silene schaf... 64 8e-09

>tr|B7ZIQ6|B7ZIQ6_KETDA Ribosomal protein L33 OS=Keteleeria
davidiana GN=rpl33 PE=4 SV=1
Length = 68

Score = 72.4 bits (176), Expect = 2e-11
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA + D RVTI LECTSC Q K G+ RYTTRKNRRNTP RLEL+K+C
Sbjct: 1 MAKSGDVRVTITLECTSCTQDSVYKKFPGISRYTTRKNRRNTPIRLELKKFC 52


>tr|B8R469|B8R469_TRISU Ribosomal protein L33 OS=Trifolium
subterraneum GN=rpl33 PE=4 SV=1
Length = 66

Score = 70.1 bits (170), Expect = 1e-10
Identities = 30/52 (57%), Positives = 40/52 (76%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KD R+T+ LECTSC ++ + KS G+ RY T+KNR NTP+RLEL+K+C
Sbjct: 1 MAKGKDIRITVILECTSCDKKSVNKKSRGISRYITQKNRHNTPSRLELKKFC 52


>tr|A7QCX0|A7QCX0_VITVI 50S ribosomal protein L33 OS=Vitis vinifera
GN=rpl33 PE=3 SV=1
Length = 66

Score = 69.3 bits (168), Expect = 2e-10
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA +KDAR+ + LECTSC++ + +S G+ RY T KNR NTP RLEL+K+C
Sbjct: 1 MAKSKDARIRVLLECTSCVRDGVNKESTGISRYITEKNRHNTPGRLELQKFC 52


>tr|B5AH23|B5AH23_9ROSI Ribosomal protein L33 OS=Gonystylus bancanus
GN=rpl33 PE=4 SV=1
Length = 66

Score = 68.9 bits (167), Expect = 3e-10
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA +KD RV I LECTSC++ + +S G+ RY T+KNR NTP+RLEL K+C
Sbjct: 1 MAKSKDVRVMIILECTSCVRNGINKESTGISRYITQKNRHNTPSRLELRKFC 52


>tr|Q4FG92|Q4FG92_ACOAM 50S ribosomal protein L33 (Fragment)
OS=Acorus americanus GN=rpl33 PE=3 SV=1
Length = 66

Score = 68.6 bits (166), Expect = 3e-10
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KDAR+T+ LECTSC++ + +S G+ RY T+KNR NT +RLEL KYC
Sbjct: 1 MAKGKDARLTVILECTSCVRNGVNKESPGISRYITQKNRHNTSSRLELRKYC 52


>tr|Q06R44|Q06R44_9LAMI 50S ribosomal protein L33 OS=Forsythia
europaea GN=rpl33 PE=3 SV=1
Length = 66

Score = 68.6 bits (166), Expect = 3e-10
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KDARVT+ LECTSC++ S G+ RY T+KNR NTP RLEL K+C
Sbjct: 1 MAKGKDARVTVILECTSCVRNGVKKVSRGISRYITQKNRHNTPNRLELRKFC 52


>tr|Q06QZ1|Q06QZ1_9LAMI 50S ribosomal protein L33 OS=Jasminum
abyssinicum GN=rpl33 PE=3 SV=1
Length = 66

Score = 68.6 bits (166), Expect = 3e-10
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KDARVT+ LECTSC++ S G+ RY T+KNR NTP RLEL K+C
Sbjct: 1 MAKGKDARVTVILECTSCVRNGVKKVSRGISRYITQKNRHNTPNRLELRKFC 52


>tr|B2D074|B2D074_OLEEU Ribosomal protein L33 OS=Olea europaea
GN=rpl33 PE=4 SV=1
Length = 66

Score = 68.6 bits (166), Expect = 3e-10
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KDARVT+ LECTSC++ S G+ RY T+KNR NTP RLEL K+C
Sbjct: 1 MAKGKDARVTVILECTSCVRNGVKKVSRGISRYITQKNRHNTPNRLELRKFC 52


>tr|Q4FG87|Q4FG87_9ASPA 50S ribosomal protein L33 (Fragment)
OS=Yucca schidigera GN=rpl33 PE=3 SV=1
Length = 66

Score = 68.2 bits (165), Expect = 4e-10
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA KD RV + LECTSCIQ + +S G+ RY T+KNR NTP+RL+L K+C
Sbjct: 1 MAKGKDVRVRVILECTSCIQNGVNKESPGISRYITQKNRHNTPSRLDLRKFC 52


>tr|B3IWG9|B3IWG9_TAKLE Ribosomal protein L33 OS=Takakia
lepidozioides GN=rpl33 PE=4 SV=1
Length = 65

Score = 68.2 bits (165), Expect = 4e-10
Identities = 33/52 (63%), Positives = 38/52 (73%)
Frame = +1

Query: 493 MANTKDARVTIALECTSCIQRKTSGKSAGLCRYTTRKNRRNTPARLELEKYC 648
MA +D RVTI LECTSC Q K G+ RYTT+KNRRNTP RLEL+K+C
Sbjct: 1 MAKNRDVRVTITLECTSCAQNGEKIK-LGVSRYTTKKNRRNTPTRLELKKFC 51