DK952832 |
Clone id |
TST38A01NGRL0015_C16 |
Library |
TST38 |
Length |
609 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_C16. 5' end sequence. |
Accession |
DK952832 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL162Contig1 |
Sequence |
CGGAAATTGTGTGTCTTTGTGTGAGGCGAACAAGCTGCTGAGCCGCCGCTCTTCCTTTCC TCTTATCTGTGTGTGCAGTGAAGAAGGCGATGGAGTACCATCCAGGCCCAGGTCGGAATC AGCTCTTTGTGCCAGGGCCCGTGAATGTCCCCGAGCAAGTTCTGCGCGCCATGAACCGCA ACAATGAAGACTACCGCTCCCCCGCCATGCCTACCCTCTCCAAGTCCGTTCTTGAGGATA TCAAACGCATCTTCAAGACCACAACAGCTACTTCCTTCATCATTCCCACCACAGGAACTG GTGCTTGGGAGAGTGCTCTAACCAACACCCTGTCTCCAAGGGACAAAATCCTCACCTTCA GGCTGGGGCAATTCAGTCTTCTATGGGTAGACCAGATGCAGCGGCTCAATTTTGATGTTG ATGTGGTGGATGTGGAATGGGGTGCTGGTGTTGACCTCTCAGTGCTTCGAGCAAAGCTTC AGTCTGACACCAAACATGAAATTAAGGCTGTGTGCGTAGTTCACAATGAGACAGCAACAG GCGTTACCAATGATCTTGCTGGGATTCGCAATGTCATAGATGCATGCCAGCATCCAGCTC TCTTTCTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q56YA5 |
Definition |
sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana |
Align length |
173 |
Score (bit) |
233.0 |
E-value |
4.0e-61 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952832|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_C16, 5' (609 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arab... 233 4e-61 sp|P55819|SGAA_METEX Serine--glyoxylate aminotransferase OS=Meth... 172 2e-42 sp|O08374|SGAA_HYPME Serine--glyoxylate aminotransferase OS=Hyph... 164 3e-40 sp|P16421|DHSS_ANACY Soluble hydrogenase 42 kDa subunit OS=Anaba... 93 9e-19 sp|Q58369|Y959_METJA Uncharacterized aminotransferase MJ0959 OS=... 68 3e-11 sp|P14776|DHSS_SYNP1 Soluble hydrogenase, small subunit OS=Synec... 66 1e-10 sp|O32148|PUCG_BACSU Purine catabolism protein pucG OS=Bacillus ... 60 7e-09 sp|Q54GT6|SPYA_DICDI Serine--pyruvate aminotransferase OS=Dictyo... 47 1e-04 sp|P21549|SPYA_HUMAN Serine--pyruvate aminotransferase OS=Homo s... 44 6e-04 sp|O35423|SPYA_MOUSE Serine--pyruvate aminotransferase, mitochon... 41 0.004 sp|B1HPR6|PHNW_LYSSC 2-aminoethylphosphonate--pyruvate transamin... 39 0.021 sp|A6L4N0|PHNW_BACV8 2-aminoethylphosphonate--pyruvate transamin... 37 0.10 sp|P96060|PHNW_SALTY 2-aminoethylphosphonate--pyruvate transamin... 36 0.13 sp|A9MWZ9|PHNW_SALPB 2-aminoethylphosphonate--pyruvate transamin... 36 0.13 sp|Q57SD3|PHNW_SALCH 2-aminoethylphosphonate--pyruvate transamin... 36 0.13 sp|P31030|SPYA_RABIT Serine--pyruvate aminotransferase OS=Orycto... 36 0.18 sp|Q9KLY7|PHNW_VIBCH 2-aminoethylphosphonate--pyruvate transamin... 36 0.18 sp|A5F049|PHNW_VIBC3 2-aminoethylphosphonate--pyruvate transamin... 36 0.18 sp|Q8RLU1|PHNW_BACCE 2-aminoethylphosphonate--pyruvate transamin... 36 0.18 sp|A4XHL5|GLGA_CALS8 Glycogen synthase OS=Caldicellulosiruptor s... 36 0.18 sp|P84187|SGAT_MAIZE Serine--glyoxylate aminotransferase (Fragme... 35 0.23 sp|Q5PFR0|PHNW_SALPA 2-aminoethylphosphonate--pyruvate transamin... 35 0.30 sp|Q6HLM0|PHNW_BACHK 2-aminoethylphosphonate--pyruvate transamin... 35 0.30 sp|Q63E45|PHNW_BACCZ 2-aminoethylphosphonate--pyruvate transamin... 35 0.30 sp|Q81TE0|PHNW_BACAN 2-aminoethylphosphonate--pyruvate transamin... 35 0.30 sp|A0RBE9|PHNW_BACAH 2-aminoethylphosphonate--pyruvate transamin... 35 0.30 sp|Q81G81|PHNW_BACCR 2-aminoethylphosphonate--pyruvate transamin... 35 0.39 sp|Q8Z8W6|PHNW_SALTI 2-aminoethylphosphonate--pyruvate transamin... 34 0.51 sp|Q73BH8|PHNW_BACC1 2-aminoethylphosphonate--pyruvate transamin... 34 0.51 sp|P84188|SGAT_WHEAT Serine--glyoxylate aminotransferase (Fragme... 34 0.67
>sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2 Length = 401
Score = 233 bits (595), Expect = 4e-61 Identities = 107/173 (61%), Positives = 136/173 (78%) Frame = +3
Query: 90 MEYHPGPGRNQLFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXX 269 M+Y GPGR+ LFVPGPVN+PE V+RAMNRNNEDYRSPA+P L+K++LED+K+IFK Sbjct: 1 MDYMYGPGRHHLFVPGPVNIPEPVIRAMNRNNEDYRSPAIPALTKTLLEDVKKIFKTTSG 60
Query: 270 XXXXXXXXXXGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAG 449 GAWESALTNTLSP D+I++F +GQFSLLW+DQ +RLNF+VDVV+ +WG G Sbjct: 61 TPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQKRLNFNVDVVESDWGQG 120
Query: 450 VDLSVLRAKLQSDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFL 608 +L VL +KL D H IKA+C+VHNETATGVTND++ +R ++D +HPAL L Sbjct: 121 ANLQVLASKLSQDENHTIKAICIVHNETATGVTNDISAVRTLLDHYKHPALLL 173
>sp|P55819|SGAA_METEX Serine--glyoxylate aminotransferase OS=Methylobacterium extorquens GN=sgaA PE=3 SV=1 Length = 379
Score = 172 bits (435), Expect = 2e-42 Identities = 84/165 (50%), Positives = 107/165 (64%) Frame = +3
Query: 108 PGRNQLFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXX 287 PGRN LFVPGP N+P++V+RAM +ED+RS P+L+K + ED K++F Sbjct: 2 PGRNHLFVPGPTNIPDRVMRAMMVQSEDHRSVDFPSLTKPLFEDTKKVFGSTEGTIFLFP 61
Query: 288 XXXXGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVL 467 G WESAL+NTL+ DK+L R GQFS LW+D QRL DV V + EWG G + Sbjct: 62 ASGTGIWESALSNTLARGDKVLAARFGQFSHLWIDMAQRLGLDVVVQEEEWGTGAKPEKI 121
Query: 468 RAKLQSDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPAL 602 L++D HEIKAV VVHNETATGVT+++ +R IDA HPAL Sbjct: 122 EEALRADKNHEIKAVMVVHNETATGVTSNIGAVRKAIDAAGHPAL 166
>sp|O08374|SGAA_HYPME Serine--glyoxylate aminotransferase OS=Hyphomicrobium methylovorum GN=sgaA PE=3 SV=2 Length = 405
Score = 164 bits (415), Expect = 3e-40 Identities = 81/162 (50%), Positives = 101/162 (62%) Frame = +3
Query: 123 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 302 LF+PGP N+P+ V AMN ED RSP P + + ED+K+ FK G Sbjct: 7 LFIPGPTNIPDAVRMAMNIPMEDMRSPEFPKFTLPLFEDLKKAFKMKDGRVFIFPSSGTG 66
Query: 303 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 482 AWESA+ NTL+ DK+L R GQFSLLWVD +RL V+V D EWG GV + L Sbjct: 67 AWESAVENTLATGDKVLMSRFGQFSLLWVDMCERLGLKVEVCDEEWGTGVPVEKYADILA 126
Query: 483 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFL 608 D HEIKAV V HNETATGV++D+AG+R +DA +HPAL + Sbjct: 127 KDKNHEIKAVFVTHNETATGVSSDVAGVRKALDAAKHPALLM 168
>sp|P16421|DHSS_ANACY Soluble hydrogenase 42 kDa subunit OS=Anabaena cylindrica PE=1 SV=1 Length = 383
Score = 93.2 bits (230), Expect = 9e-19 Identities = 52/150 (34%), Positives = 78/150 (52%) Frame = +3
Query: 123 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 302 L +PGP VPE L A+ ++ +R+ + V +++K + + G Sbjct: 7 LMIPGPTPVPEAALLALAKHPIGHRTSEFSNMMGEVTQNLKWLHQTESDVLMLNVSGT-G 65
Query: 303 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 482 A E+ + N LSP D+IL G+F WV+ Q +V+ + EWG +D KLQ Sbjct: 66 AVEAGMINFLSPGDRILVGSNGKFGERWVEVGQAFGLNVEAITAEWGQPLDPDKFAQKLQ 125
Query: 483 SDTKHEIKAVCVVHNETATGVTNDLAGIRN 572 +DT EIKAV + H+ET+TGV NDL I + Sbjct: 126 ADTNKEIKAVIITHSETSTGVINDLVAINS 155
>sp|Q58369|Y959_METJA Uncharacterized aminotransferase MJ0959 OS=Methanocaldococcus jannaschii GN=MJ0959 PE=3 SV=1 Length = 385
Score = 68.2 bits (165), Expect = 3e-11 Identities = 45/152 (29%), Positives = 72/152 (47%) Frame = +3
Query: 123 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 302 L +PGP VP +VL AM +R+ L + +E +K++F Sbjct: 10 LMIPGPTMVPPEVLNAMALPVIGHRTKDYSNLLEDTIEKLKKVF-ITENDTFLITGSGTA 68
Query: 303 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 482 A + A++N + DK+L G F + + ++ + +DVEWG + ++ L Sbjct: 69 AMDMAISNIIKRGDKVLNIVTGNFGERFANIVKAYKGEAIRLDVEWGDMAEPEAVKEIL- 127
Query: 483 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVI 578 D +IKAV VVHNET+TG N + I V+ Sbjct: 128 -DKYDDIKAVTVVHNETSTGARNPIKEIGEVV 158
>sp|P14776|DHSS_SYNP1 Soluble hydrogenase, small subunit OS=Synechococcus sp. (strain PCC 6716) PE=3 SV=1 Length = 384
Score = 66.2 bits (160), Expect = 1e-10 Identities = 42/154 (27%), Positives = 69/154 (44%) Frame = +3
Query: 123 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 302 L +PGP VPE VL ++ ++ +RS + ++ IK + + G Sbjct: 7 LMIPGPTPVPESVLLSLGKHPIGHRSGEFSQIMAAMTAGIKWLHQTQNEVLILAASGT-G 65
Query: 303 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 482 A E+ + N LS D+++ G+F W + + + WG ++ +A L Sbjct: 66 AMEAGIINFLSAGDRVVVGCNGKFGDRWGEVCDAYGLTTERISAPWGQPLNPDDFKAVLD 125
Query: 483 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDA 584 + KAV V H+ET+TGV NDL I + A Sbjct: 126 GHRQKPSKAVIVTHSETSTGVINDLEAINRHVKA 159
>sp|O32148|PUCG_BACSU Purine catabolism protein pucG OS=Bacillus subtilis GN=pucG PE=2 SV=1 Length = 416
Score = 60.5 bits (145), Expect = 7e-09 Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 1/163 (0%) Frame = +3
Query: 123 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 302 + PGPV V +VLR M+ PA + +E ++ +F+ Sbjct: 14 IMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRA 73
Query: 303 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 482 E+ L + + P D +L G+F L + +R +V +++ EWG D + +++ Sbjct: 74 GIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIK 133
Query: 483 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQ-HPALFL 608 K + K V +VH ET+TG + L I +AC+ ALF+ Sbjct: 134 ---KVKPKIVAMVHGETSTGRIHPLKAIG---EACRTEDALFI 170
>sp|Q54GT6|SPYA_DICDI Serine--pyruvate aminotransferase OS=Dictyostelium discoideum GN=agxt PE=3 SV=1 Length = 407
Score = 46.6 bits (109), Expect = 1e-04 Identities = 33/148 (22%), Positives = 63/148 (42%) Frame = +3
Query: 123 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 302 L PGP N+ +V + + + Y + + +E ++ +F+ Sbjct: 21 LLGPGPSNLHPRVNQQLISSMVGYTDASYYKVMDETMELMRYLFQTDNHFTIPISGAGTA 80
Query: 303 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 482 A E+ ++N + P DK++ G FS R ++ VD +WG L + + L Sbjct: 81 AMETCVSNLIEPGDKVVCLVSGFFSDRIYQMAVRYGGNILKVDKQWGQWFALEEIESAL- 139
Query: 483 SDTKHEIKAVCVVHNETATGVTNDLAGI 566 +H+ + +V ET+TGV + G+ Sbjct: 140 --VQHKPSLLTLVFGETSTGVKQQMEGV 165
>sp|P21549|SPYA_HUMAN Serine--pyruvate aminotransferase OS=Homo sapiens GN=AGXT PE=1 SV=1 Length = 392
Score = 43.9 bits (102), Expect = 6e-04 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 1/150 (0%) Frame = +3
Query: 117 NQLFV-PGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXX 293 NQL + PGP N+P +++ A S M + + E I+ +F+ Sbjct: 22 NQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGS 81
Query: 294 XXGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRA 473 A E+AL N L P D L G + VD +R+ V + + G L + Sbjct: 82 GHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEE 141
Query: 474 KLQSDTKHEIKAVCVVHNETATGVTNDLAG 563 L +H+ + + H E++TGV L G Sbjct: 142 GL---AQHKPVLLFLTHGESSTGVLQPLDG 168
>sp|O35423|SPYA_MOUSE Serine--pyruvate aminotransferase, mitochondrial OS=Mus musculus GN=Agxt PE=2 SV=2 Length = 413
Score = 41.2 bits (95), Expect = 0.004 Identities = 36/147 (24%), Positives = 61/147 (41%) Frame = +3
Query: 123 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 302 L PGP N+ +VL A + + M + + + + I+ +F+ Sbjct: 47 LLGPGPSNLAPRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHC 106
Query: 303 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLRAKLQ 482 A E+AL N L P D LT G + + + R+ V + + G L + L Sbjct: 107 AMETALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGL- 165
Query: 483 SDTKHEIKAVCVVHNETATGVTNDLAG 563 +H+ + +VH E++TGV L G Sbjct: 166 --AQHKPVLLFLVHGESSTGVVQPLDG 190
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TY57 |
Definition |
tr|A9TY57|A9TY57_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
173 |
Score (bit) |
253.0 |
E-value |
8.0e-66 |
Report |
|