DK952842 |
Clone id |
TST38A01NGRL0015_D02 |
Library |
TST38 |
Length |
676 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_D02. 5' end sequence. |
Accession |
DK952842 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3875Contig1 |
Sequence |
GCATGGCGAGCTTATTAGCCACATTGCCATTCCGCAAGCTCTCAGCATGTTCGGGTGATG TCGCTGGGCCATGTCCGTCGACTGCACCCGTGCTTTTGCCATCAAGGGCCGAGCTTTCCT CAGAAAAACATCATTCGCAGGTTAGTTGTTCCAGAAGGTTCTGGAGTGTTGCCCTGGCTG CCTCCATTGTAGTGTCTACTCTGCCTGCACAGGCACGCGACCGCAGGAACAAGAAGGAAA TCCCCCTTGATGATTACCAGACAAGTAATGAAGGGATAAAATACTACGATGTACTTGAAG GGAAAGGTGGCGTGGTGGAGAGAGGTCGAACTGTTTTGGTACACTTTGACTGCATGTATC GTGGCATTGATGCTGTCTCAAGTCGCGAGTCTAAAATACTAGGTGGAAATCGAGTCATAG CACAGCCCTATGAGCTTGTAGTGGGTTCGGTACCGGGCAAGGAGAGAAAGCGTGAATTCG TTGAAAATGCCAATGGTCTATTTTCAGCACAAGCTTCACCAAAGCCTCCGCCAGCTCTGT ACTCAATAACAGAGGGAATGCGTGTTGGTGGCAAGCGCAGAGTGGTTGTGCCCCCTGATC TAGGTTACGGGAGCAAAGGGTCCAATGAAATTCCTCCAGATGCAACATTTCTGATGGATA TTGAACTTCTTGAAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LM71 |
Definition |
sp|Q9LM71|FKBP1_ARATH Probable FKBP-type peptidyl-prolyl cis-trans isomerase 1, chloroplastic OS=Arabidopsis thaliana |
Align length |
183 |
Score (bit) |
208.0 |
E-value |
2.0e-53 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NYZ5 |
Definition |
tr|A9NYZ5|A9NYZ5_PICSI Peptidyl-prolyl cis-trans isomerase OS=Picea sitchensis |
Align length |
181 |
Score (bit) |
228.0 |
E-value |
3.0e-58 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952842|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_D02, 5' (676 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NYZ5|A9NYZ5_PICSI Peptidyl-prolyl cis-trans isomerase OS=Pi... 228 3e-58 tr|A9NMY9|A9NMY9_PICSI Peptidyl-prolyl cis-trans isomerase OS=Pi... 224 3e-57 tr|Q6ZGL6|Q6ZGL6_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Or... 215 2e-54 tr|Q0E4I6|Q0E4I6_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Or... 215 2e-54 tr|B8AGI3|B8AGI3_ORYSI Putative uncharacterized protein OS=Oryza... 215 2e-54 tr|A7QPF0|A7QPF0_VITVI Peptidyl-prolyl cis-trans isomerase OS=Vi... 212 2e-53 tr|A5BH88|A5BH88_VITVI Peptidyl-prolyl cis-trans isomerase OS=Vi... 210 8e-53 tr|A9TES8|A9TES8_PHYPA Peptidyl-prolyl cis-trans isomerase OS=Ph... 209 2e-52 tr|Q541Y2|Q541Y2_ARATH Peptidyl-prolyl cis-trans isomerase OS=Ar... 208 2e-52 tr|A3A2G6|A3A2G6_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Or... 193 9e-48 tr|A8I1U5|A8I1U5_CHLRE Peptidyl-prolyl cis-trans isomerase OS=Ch... 117 7e-25 tr|Q8GYW4|Q8GYW4_ARATH Peptidyl-prolyl cis-trans isomerase OS=Ar... 101 4e-20 tr|Q01G41|Q01G41_OSTTA Peptidyl-prolyl cis-trans isomerase OS=Os... 78 4e-13 tr|A8JC71|A8JC71_CHLRE Peptidyl-prolyl cis-trans isomerase OS=Ch... 76 2e-12 tr|A4RRI7|A4RRI7_OSTLU Peptidyl-prolyl cis-trans isomerase OS=Os... 75 3e-12 tr|Q9SR70|Q9SR70_ARATH Peptidyl-prolyl cis-trans isomerase OS=Ar... 70 9e-11 tr|A7QJ92|A7QJ92_VITVI Peptidyl-prolyl cis-trans isomerase OS=Vi... 69 3e-10 tr|A9RSW2|A9RSW2_PHYPA Peptidyl-prolyl cis-trans isomerase (Frag... 67 1e-09 tr|B4FR04|B4FR04_MAIZE Putative uncharacterized protein OS=Zea m... 67 1e-09 tr|B8B7Y1|B8B7Y1_ORYSI Putative uncharacterized protein OS=Oryza... 66 2e-09 tr|A9P0Q6|A9P0Q6_PICSI Peptidyl-prolyl cis-trans isomerase OS=Pi... 64 9e-09 tr|A5C0W3|A5C0W3_VITVI Peptidyl-prolyl cis-trans isomerase OS=Vi... 58 5e-07 tr|B3E591|B3E591_GEOLS Peptidylprolyl isomerase FKBP-type OS=Geo... 49 3e-04 tr|Q393J4|Q393J4_BURS3 Peptidyl-prolyl cis-trans isomerase OS=Bu... 48 6e-04 tr|B1FV30|B1FV30_9BURK Peptidyl-prolyl cis-trans isomerase OS=Bu... 47 8e-04 tr|B4EMY8|B4EMY8_BURCJ Peptidyl-prolyl cis-trans isomerase OS=Bu... 47 0.001 tr|B2T9M2|B2T9M2_BURPP Peptidylprolyl isomerase FKBP-type OS=Bur... 47 0.001 tr|A3P845|A3P845_BURP0 Peptidyl-prolyl cis-trans isomerase OS=Bu... 47 0.001 tr|Q13S15|Q13S15_BURXL Peptidyl-prolyl cis-trans isomerase OS=Bu... 47 0.001 tr|A5GMK2|A5GMK2_SYNPW Peptidyl-prolyl cis-trans isomerase OS=Sy... 47 0.001
>tr|A9NYZ5|A9NYZ5_PICSI Peptidyl-prolyl cis-trans isomerase OS=Picea sitchensis PE=2 SV=1 Length = 277
Score = 228 bits (580), Expect = 3e-58 Identities = 112/181 (61%), Positives = 137/181 (75%), Gaps = 3/181 (1%) Frame = +3
Query: 141 VSCSRRFWSVALAASIVVSTL---PAQARDRRNKKEIPLDDYQTSNEGIKYYDVLEGKGG 311 ++ SRR VA A ++ L PAQAR RRN K IP+++Y+T++EGIKYYD++EG G Sbjct: 89 LAISRRKAGVAAMALTCITLLIVQPAQARQRRNTKAIPIEEYKTNSEGIKYYDLVEGNGP 148
Query: 312 VVERGRTVLVHFDCMYRGIDAVSSRESKILGGNRVIAQPYELVVGSVPGKERKREFVENA 491 +G TVLVHFDC+YRG+ VSSRESKIL GNRVIAQPYE +VG+ PG+ERKREFV+N Sbjct: 149 EARKGSTVLVHFDCIYRGLTVVSSRESKILAGNRVIAQPYEFIVGAPPGRERKREFVDNP 208
Query: 492 NGLFSAQASPKPPPALYSITEXXXXXXXXXXXXPPDLGYGSKGSNEIPPDATFLMDIELL 671 NGLFSAQASPKPPPALYSITE PP++GYG KG NEIPPD TF +++ELL Sbjct: 209 NGLFSAQASPKPPPALYSITEGMRVGAQRTVIVPPEVGYGKKGMNEIPPDGTFELNVELL 268
Query: 672 E 674 + Sbjct: 269 Q 269
>tr|A9NMY9|A9NMY9_PICSI Peptidyl-prolyl cis-trans isomerase OS=Picea sitchensis PE=2 SV=1 Length = 277
Score = 224 bits (572), Expect = 3e-57 Identities = 111/181 (61%), Positives = 136/181 (75%), Gaps = 3/181 (1%) Frame = +3
Query: 141 VSCSRRFWSVALAASIVVSTL---PAQARDRRNKKEIPLDDYQTSNEGIKYYDVLEGKGG 311 ++ SRR VA A ++ L PAQAR RRN K IP+++Y+T++EGIKYYD++EG G Sbjct: 89 LAISRRKAGVAAMALTCITLLIVQPAQARQRRNTKAIPIEEYKTNSEGIKYYDLVEGNGP 148
Query: 312 VVERGRTVLVHFDCMYRGIDAVSSRESKILGGNRVIAQPYELVVGSVPGKERKREFVENA 491 +G TVLVHFDC+YRG+ VSSRESKIL GNRVIAQPYE +VG+ PG+ERKREFV+N Sbjct: 149 EARKGSTVLVHFDCVYRGLTVVSSRESKILAGNRVIAQPYEFIVGAPPGRERKREFVDNP 208
Query: 492 NGLFSAQASPKPPPALYSITEXXXXXXXXXXXXPPDLGYGSKGSNEIPPDATFLMDIELL 671 NGLFSAQASPKPP ALYSITE PP++GYG KG NEIPPD TF +++ELL Sbjct: 209 NGLFSAQASPKPPAALYSITEGMRVGAQRTVIVPPEVGYGKKGMNEIPPDGTFELNVELL 268
Query: 672 E 674 + Sbjct: 269 Q 269
>tr|Q6ZGL6|Q6ZGL6_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Oryza sativa subsp. japonica GN=OJ1442_E05.30 PE=2 SV=1 Length = 242
Score = 215 bits (548), Expect = 2e-54 Identities = 113/202 (55%), Positives = 141/202 (69%), Gaps = 2/202 (0%) Frame = +3
Query: 75 PSTAPVLLPSRAELSSEKHHSQVSCSRRFWSVAL--AASIVVSTLPAQARDRRNKKEIPL 248 PS+AP PSR ++ + + SRR + L AA +++ P RR + + L Sbjct: 35 PSSAPPP-PSRGACAAACCCLRAAVSRRRAAAQLLSAAGFLIAVSPPSLAARRGRMVVSL 93
Query: 249 DDYQTSNEGIKYYDVLEGKGGVVERGRTVLVHFDCMYRGIDAVSSRESKILGGNRVIAQP 428 +DY TS +G+KYYD++EGKG E+G TV VHFDC+YRGI AVSSRE+K+L GNR IAQP Sbjct: 94 EDYVTSPDGLKYYDLVEGKGPTAEKGSTVQVHFDCIYRGITAVSSREAKLLAGNRSIAQP 153
Query: 429 YELVVGSVPGKERKREFVENANGLFSAQASPKPPPALYSITEXXXXXXXXXXXXPPDLGY 608 YE VGS+PGKERKREFV++ANGL+SAQASPKPP A+Y+ITE PP+LGY Sbjct: 154 YEFSVGSLPGKERKREFVDSANGLYSAQASPKPPAAMYTITEGMKVGGKRRVIVPPELGY 213
Query: 609 GSKGSNEIPPDATFLMDIELLE 674 G KG NEIPPDA F +DIELLE Sbjct: 214 GKKGMNEIPPDAPFELDIELLE 235
>tr|Q0E4I6|Q0E4I6_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Oryza sativa subsp. japonica GN=Os02g0117600 PE=3 SV=1 Length = 224
Score = 215 bits (548), Expect = 2e-54 Identities = 113/202 (55%), Positives = 141/202 (69%), Gaps = 2/202 (0%) Frame = +3
Query: 75 PSTAPVLLPSRAELSSEKHHSQVSCSRRFWSVAL--AASIVVSTLPAQARDRRNKKEIPL 248 PS+AP PSR ++ + + SRR + L AA +++ P RR + + L Sbjct: 17 PSSAPPP-PSRGACAAACCCLRAAVSRRRAAAQLLSAAGFLIAVSPPSLAARRGRMVVSL 75
Query: 249 DDYQTSNEGIKYYDVLEGKGGVVERGRTVLVHFDCMYRGIDAVSSRESKILGGNRVIAQP 428 +DY TS +G+KYYD++EGKG E+G TV VHFDC+YRGI AVSSRE+K+L GNR IAQP Sbjct: 76 EDYVTSPDGLKYYDLVEGKGPTAEKGSTVQVHFDCIYRGITAVSSREAKLLAGNRSIAQP 135
Query: 429 YELVVGSVPGKERKREFVENANGLFSAQASPKPPPALYSITEXXXXXXXXXXXXPPDLGY 608 YE VGS+PGKERKREFV++ANGL+SAQASPKPP A+Y+ITE PP+LGY Sbjct: 136 YEFSVGSLPGKERKREFVDSANGLYSAQASPKPPAAMYTITEGMKVGGKRRVIVPPELGY 195
Query: 609 GSKGSNEIPPDATFLMDIELLE 674 G KG NEIPPDA F +DIELLE Sbjct: 196 GKKGMNEIPPDAPFELDIELLE 217
>tr|B8AGI3|B8AGI3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05592 PE=4 SV=1 Length = 224
Score = 215 bits (548), Expect = 2e-54 Identities = 113/202 (55%), Positives = 141/202 (69%), Gaps = 2/202 (0%) Frame = +3
Query: 75 PSTAPVLLPSRAELSSEKHHSQVSCSRRFWSVAL--AASIVVSTLPAQARDRRNKKEIPL 248 PS+AP PSR ++ + + SRR + L AA +++ P RR + + L Sbjct: 17 PSSAPPP-PSRGACAAACCCLRAAVSRRRAAAQLLSAAGFLIAVSPPSLAARRGRMVVSL 75
Query: 249 DDYQTSNEGIKYYDVLEGKGGVVERGRTVLVHFDCMYRGIDAVSSRESKILGGNRVIAQP 428 +DY TS +G+KYYD++EGKG E+G TV VHFDC+YRGI AVSSRE+K+L GNR IAQP Sbjct: 76 EDYVTSPDGLKYYDLVEGKGPTAEKGSTVQVHFDCIYRGITAVSSREAKLLAGNRSIAQP 135
Query: 429 YELVVGSVPGKERKREFVENANGLFSAQASPKPPPALYSITEXXXXXXXXXXXXPPDLGY 608 YE VGS+PGKERKREFV++ANGL+SAQASPKPP A+Y+ITE PP+LGY Sbjct: 136 YEFSVGSLPGKERKREFVDSANGLYSAQASPKPPAAMYTITEGMKVGGKRRVIVPPELGY 195
Query: 609 GSKGSNEIPPDATFLMDIELLE 674 G KG NEIPPDA F +DIELLE Sbjct: 196 GKKGMNEIPPDAPFELDIELLE 217
>tr|A7QPF0|A7QPF0_VITVI Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=GSVIVT00002914001 PE=3 SV=1 Length = 222
Score = 212 bits (539), Expect = 2e-53 Identities = 104/178 (58%), Positives = 130/178 (73%), Gaps = 9/178 (5%) Frame = +3
Query: 168 VALAASIVVSTLP---------AQARDRRNKKEIPLDDYQTSNEGIKYYDVLEGKGGVVE 320 ++ +I++S LP + AR+RR KK IPL+DY TS +G+KYYDV++G G V E Sbjct: 38 ISRRCAILISVLPFSVISQPHSSDARERRTKKNIPLEDYLTSPDGLKYYDVVDGNGPVAE 97
Query: 321 RGRTVLVHFDCMYRGIDAVSSRESKILGGNRVIAQPYELVVGSVPGKERKREFVENANGL 500 +G +V VHFDC+YR I AVSSRESK+L GNR+IAQPY VG+ PGKERKREFV+N NGL Sbjct: 98 KGSSVQVHFDCIYRSITAVSSRESKLLAGNRIIAQPYVFKVGAPPGKERKREFVDNPNGL 157
Query: 501 FSAQASPKPPPALYSITEXXXXXXXXXXXXPPDLGYGSKGSNEIPPDATFLMDIELLE 674 FSAQA+PKPPPALYSITE PP+ GYG KG +EIPP ATF +++ELL+ Sbjct: 158 FSAQAAPKPPPALYSITEGMKVGGKRTVIVPPEAGYGQKGMSEIPPGATFELNVELLQ 215
>tr|A5BH88|A5BH88_VITVI Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VITISV_024651 PE=3 SV=1 Length = 682
Score = 210 bits (534), Expect = 8e-53 Identities = 104/173 (60%), Positives = 127/173 (73%), Gaps = 9/173 (5%) Frame = +3
Query: 183 SIVVSTLP---------AQARDRRNKKEIPLDDYQTSNEGIKYYDVLEGKGGVVERGRTV 335 +I++S LP + AR+RR KK IPL+DY TS +G+KYYDV++G G V E+G +V Sbjct: 43 AILISVLPFSLISQPHSSDARERRTKKNIPLEDYLTSPDGLKYYDVVBGNGPVAEKGSSV 102
Query: 336 LVHFDCMYRGIDAVSSRESKILGGNRVIAQPYELVVGSVPGKERKREFVENANGLFSAQA 515 VHFDC+YR I AVSSRESK L GNR+IAQPY VG+ PGKERKREFV+N NGLFSAQA Sbjct: 103 QVHFDCIYRSITAVSSRESKXLAGNRIIAQPYVFKVGAPPGKERKREFVDNPNGLFSAQA 162
Query: 516 SPKPPPALYSITEXXXXXXXXXXXXPPDLGYGSKGSNEIPPDATFLMDIELLE 674 +PKPPPALYSITE PP+ GYG KG +EIPP ATF +++ELL+ Sbjct: 163 APKPPPALYSITEGMKVGGKRTVIVPPEAGYGQKGMSEIPPGATFELNVELLQ 215
>tr|A9TES8|A9TES8_PHYPA Peptidyl-prolyl cis-trans isomerase OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_91821 PE=3 SV=1 Length = 289
Score = 209 bits (531), Expect = 2e-52 Identities = 104/167 (62%), Positives = 125/167 (74%) Frame = +3
Query: 174 LAASIVVSTLPAQARDRRNKKEIPLDDYQTSNEGIKYYDVLEGKGGVVERGRTVLVHFDC 353 LA S++ + A ARDRRNKK I DY TS+ GIKY+D+ EGKG V +G +V+VHFDC Sbjct: 117 LAMSMLGNGGEALARDRRNKKTIAETDYLTSDTGIKYFDIEEGKGAVATKGESVMVHFDC 176
Query: 354 MYRGIDAVSSRESKILGGNRVIAQPYELVVGSVPGKERKREFVENANGLFSAQASPKPPP 533 +Y+ I AVSSRESK+L GNR IA+PYEL VG+ PG+ERKR+FV+NANGLFSAQA+PKPPP Sbjct: 177 VYKTITAVSSRESKLLAGNRTIAEPYELTVGAEPGRERKRDFVDNANGLFSAQAAPKPPP 236
Query: 534 ALYSITEXXXXXXXXXXXXPPDLGYGSKGSNEIPPDATFLMDIELLE 674 LYSI E P+LGYG KG NEIPP ATF ++IELLE Sbjct: 237 VLYSIVEGMRVGGKRTVIVTPELGYGKKGQNEIPPGATFELNIELLE 283
>tr|Q541Y2|Q541Y2_ARATH Peptidyl-prolyl cis-trans isomerase OS=Arabidopsis thaliana GN=At1g20805/F2D10_27 PE=2 SV=1 Length = 232
Score = 208 bits (530), Expect = 2e-52 Identities = 106/183 (57%), Positives = 129/183 (70%), Gaps = 6/183 (3%) Frame = +3
Query: 141 VSCSRRFWSVALAASI------VVSTLPAQARDRRNKKEIPLDDYQTSNEGIKYYDVLEG 302 V SRR S+ L +SI V++ ++AR+RR++K IPL++Y T EG+K+YD+ EG Sbjct: 41 VPISRRDASIILLSSIPLTSFFVLTPSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEG 100
Query: 303 KGGVVERGRTVLVHFDCMYRGIDAVSSRESKILGGNRVIAQPYELVVGSVPGKERKREFV 482 KG V G T VHFDC YR I A+S+RESK+L GNR IAQPYE VGS PGKERKREFV Sbjct: 101 KGPVATEGSTAQVHFDCRYRSITAISTRESKLLAGNRSIAQPYEFKVGSTPGKERKREFV 160
Query: 483 ENANGLFSAQASPKPPPALYSITEXXXXXXXXXXXXPPDLGYGSKGSNEIPPDATFLMDI 662 +N NGLFSAQA+PKPPPA+Y ITE PP+ GYG KG NEIPP ATF ++I Sbjct: 161 DNPNGLFSAQAAPKPPPAMYFITEGMKVGGKRTVIVPPEAGYGQKGMNEIPPGATFELNI 220
Query: 663 ELL 671 ELL Sbjct: 221 ELL 223
>tr|A3A2G6|A3A2G6_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Oryza sativa subsp. japonica GN=OsJ_004988 PE=3 SV=1 Length = 208
Score = 193 bits (490), Expect = 9e-48 Identities = 92/135 (68%), Positives = 108/135 (80%) Frame = +3
Query: 270 EGIKYYDVLEGKGGVVERGRTVLVHFDCMYRGIDAVSSRESKILGGNRVIAQPYELVVGS 449 +G+KYYD++EGKG E+G TV VHFDC+YRGI AVSSRE+K+L GNR IAQPYE VGS Sbjct: 67 DGLKYYDLVEGKGPTAEKGSTVQVHFDCIYRGITAVSSREAKLLAGNRSIAQPYEFSVGS 126
Query: 450 VPGKERKREFVENANGLFSAQASPKPPPALYSITEXXXXXXXXXXXXPPDLGYGSKGSNE 629 +PGKERKREFV++ANGL+SAQASPKPP A+Y+ITE PP+LGYG KG NE Sbjct: 127 LPGKERKREFVDSANGLYSAQASPKPPAAMYTITEGMKVGGKRRVIVPPELGYGKKGMNE 186
Query: 630 IPPDATFLMDIELLE 674 IPPDA F +DIELLE Sbjct: 187 IPPDAPFELDIELLE 201
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