DK952863 |
Clone id |
TST38A01NGRL0015_D23 |
Library |
TST38 |
Length |
646 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_D23. 5' end sequence. |
Accession |
DK952863 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL39Contig1 |
Sequence |
GGCAACTGCAGCAGCGATGGCGCAAGCTTCTTCGATGGTGGCATCGCCGTCTCTGCACAC ATCGAAAGTGGCCGCGTGCTACCGCTTGAACTCTGCATTCCTTGGCAAGGGTCTTGGTCT TGGAGCCGCTTTGCCCAAGCCGGTCGTTACCAGGCCCGTCGCCGTTCGAGCTCAGGAGAA GTATCAAGTGATCGAGCCATTGAACGGAGACCCTTTTGTGGGCGGACTTGAGACACCCAT CACCAGCAGTCCTCTCATAGCCTGGTACCTCTCCAACCTACCGGCCTACAGGACAGCGGT TAGTCCTCTGCTGCGGGGGATTGAAGTGGGGCTTGCGCACGGGTTCTTGCTTGTGGGACC CTTTGTTAAGACAGGACCATTGCGCAACACAGATGTGGCAGGTCCTGCAGGGTCACTGGC AGCCGCAGGCCTTGTGGTAATTTTGTCAGTGTGCCTCACCATCTATGGAGTGGCCACCTT CAAAGAGGGCGCCCCCTCCCTTGCACCTTATCTCACTCTCACTGGCCGCAAGAAAGAAGC TGACAAGCTGCAAACTGCGGAAGGATGGGCCAACTTCTCCGGTGGATTCTTTTTTGGCGG CCTTTCTGGTGTTGCCTGGGCCTACTTCCTTCTGTACGTCCTGGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q41385 |
Definition |
sp|Q41385|PSAL_SPIOL Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea |
Align length |
155 |
Score (bit) |
213.0 |
E-value |
9.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952863|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_D23, 5' (646 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q41385|PSAL_SPIOL Photosystem I reaction center subunit XI, c... 213 9e-55 sp|P23993|PSAL_HORVU Photosystem I reaction center subunit XI, c... 212 1e-54 sp|Q9SUI4|PSAL_ARATH Photosystem I reaction center subunit XI, c... 209 1e-53 sp|Q39654|PSAL_CUCSA Photosystem I reaction center subunit XI, c... 207 4e-53 sp|Q8DGB4|PSAL_THEEB Photosystem I reaction center subunit XI OS... 115 2e-25 sp|Q9TM17|PSAL_CYACA Photosystem I reaction center subunit XI OS... 114 6e-25 sp|P25902|PSAL_SYNEN Photosystem I reaction center subunit XI OS... 113 1e-24 sp|O78469|PSAL_GUITH Photosystem I reaction center subunit XI OS... 109 1e-23 sp|P51222|PSAL_PORPU Photosystem I reaction center subunit XI OS... 108 2e-23 sp|P49486|PSAL_ODOSI Photosystem I reaction center subunit XI OS... 108 3e-23 sp|P37277|PSAL_SYNY3 Photosystem I reaction center subunit XI OS... 107 7e-23 sp|Q6B8P4|PSAL_GRATL Photosystem I reaction center subunit XI OS... 104 3e-22 sp|Q1XDR5|PSAL_PORYE Photosystem I reaction center subunit XI OS... 104 5e-22 sp|A0T0U5|PSAL_THAPS Photosystem I reaction center subunit XI OS... 103 6e-22 sp|Q5ENP6|PSAL_ISOGA Photosystem I reaction center subunit XI OS... 102 2e-21 sp|Q4G3B5|PSAL_EMIHU Photosystem I reaction center subunit XI OS... 102 2e-21 sp|B0JT88|PSAL_MICAN Photosystem I reaction center subunit XI OS... 101 4e-21 sp|Q85FP8|PSAL_CYAME Photosystem I reaction center subunit XI OS... 101 4e-21 sp|A0T0M6|PSAL_PHATR Photosystem I reaction center subunit XI OS... 100 5e-21 sp|O31126|PSAL_MASLA Photosystem I reaction center subunit XI OS... 98 4e-20 sp|P58577|PSAL_ANASP Photosystem I reaction center subunit XI OS... 94 5e-19 sp|P31092|PSAL_ANAVT Photosystem I reaction center subunit XI OS... 94 8e-19 sp|P95822|PSAL_SYNE7 Photosystem I reaction center subunit XI OS... 83 1e-15 sp|Q54753|PSAL_SYNP2 Photosystem I reaction center subunit XI OS... 79 2e-14 sp|P31084|PSAL_SYNP6 Photosystem I reaction center subunit XI OS... 79 3e-14 sp|O87787|PSAL_PROMA Photosystem I reaction center subunit XI OS... 76 1e-13 sp|A2BYP5|PSAL_PROM5 Photosystem I reaction center subunit XI OS... 74 5e-13 sp|Q7UZX6|PSAL_PROMP Photosystem I reaction center subunit XI OS... 73 1e-12 sp|A8G719|PSAL_PROM2 Photosystem I reaction center subunit XI OS... 72 2e-12 sp|A2BT95|PSAL_PROMS Photosystem I reaction center subunit XI OS... 72 3e-12
>sp|Q41385|PSAL_SPIOL Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea GN=PSAL PE=1 SV=1 Length = 216
Score = 213 bits (541), Expect = 9e-55 Identities = 102/155 (65%), Positives = 117/155 (75%) Frame = +2
Query: 182 YQVIEPLNGDPFVGGLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGP 361 YQVI+PLNGDPF+GGLETP+TSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHGFLLVGP Sbjct: 56 YQVIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGP 115
Query: 362 FVKTGPLRNTDXXXXXXXXXXXXXXXXXXXCLTIYGVATFKEGAPSLAPYLTLTGRKKEA 541 FVK GPLRNT+ CLT+YG+A+FKEG PS+AP LTLTGRKK+ Sbjct: 116 FVKAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQP 175
Query: 542 DKLQTAEGWANXXXXXXXXXXXXVAWAYFLLYVLD 646 D+LQ+A+GWA V WA FL+YVLD Sbjct: 176 DQLQSADGWAKFTGGFFFGGVSGVTWACFLMYVLD 210
>sp|P23993|PSAL_HORVU Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare GN=PSAL PE=1 SV=1 Length = 209
Score = 212 bits (540), Expect = 1e-54 Identities = 103/155 (66%), Positives = 113/155 (72%) Frame = +2
Query: 182 YQVIEPLNGDPFVGGLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGP 361 YQV++P+NGDPF+G LETP+TSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+LLVGP Sbjct: 49 YQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGP 108
Query: 362 FVKTGPLRNTDXXXXXXXXXXXXXXXXXXXCLTIYGVATFKEGAPSLAPYLTLTGRKKEA 541 F TGPLRNT CLT+YGVA+F EG PS AP LTLTGRKKEA Sbjct: 109 FALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEA 168
Query: 542 DKLQTAEGWANXXXXXXXXXXXXVAWAYFLLYVLD 646 DKLQTAEGW+ WAYFLLYVLD Sbjct: 169 DKLQTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLD 203
>sp|Q9SUI4|PSAL_ARATH Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana GN=PSAL PE=1 SV=2 Length = 219
Score = 209 bits (531), Expect = 1e-53 Identities = 99/155 (63%), Positives = 114/155 (73%) Frame = +2
Query: 182 YQVIEPLNGDPFVGGLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGP 361 +QV++P+NGDPF+G LETP+TSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGF LVGP Sbjct: 59 FQVVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGP 118
Query: 362 FVKTGPLRNTDXXXXXXXXXXXXXXXXXXXCLTIYGVATFKEGAPSLAPYLTLTGRKKEA 541 FVK GPLRNT CLTIYG+++FKEG PS+AP LTLTGRKK+ Sbjct: 119 FVKAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQP 178
Query: 542 DKLQTAEGWANXXXXXXXXXXXXVAWAYFLLYVLD 646 D+LQTA+GWA V WAYFLLYVLD Sbjct: 179 DQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLD 213
>sp|Q39654|PSAL_CUCSA Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus GN=PSAL PE=2 SV=1 Length = 217
Score = 207 bits (527), Expect = 4e-53 Identities = 103/155 (66%), Positives = 111/155 (71%) Frame = +2
Query: 182 YQVIEPLNGDPFVGGLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGP 361 +QVI+P+NGDPF+G LETP+TSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGP Sbjct: 57 FQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGP 116
Query: 362 FVKTGPLRNTDXXXXXXXXXXXXXXXXXXXCLTIYGVATFKEGAPSLAPYLTLTGRKKEA 541 FVK GPLRNT CLT+YGVA+F EG PS AP LTLTGRKK Sbjct: 117 FVKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTP 176
Query: 542 DKLQTAEGWANXXXXXXXXXXXXVAWAYFLLYVLD 646 D LQTA+GWA V WAYFLLYVLD Sbjct: 177 DPLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLD 211
>sp|Q8DGB4|PSAL_THEEB Photosystem I reaction center subunit XI OS=Thermosynechococcus elongatus (strain BP-1) GN=psaL PE=1 SV=1 Length = 155
Score = 115 bits (289), Expect = 2e-25 Identities = 58/150 (38%), Positives = 84/150 (56%) Frame = +2
Query: 185 QVIEPLNGDPFVGGLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPF 364 ++++P NGDPFVG L TPI+ S L+ ++ NLPAYR +SP+LRG+EVG+AHG+ L+GP+ Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPW 63
Query: 365 VKTGPLRNTDXXXXXXXXXXXXXXXXXXXCLTIYGVATFKEGAPSLAPYLTLTGRKKEAD 544 VK GPLR++D CL YG+ +F++G S +D Sbjct: 64 VKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSS-------------SD 110
Query: 545 KLQTAEGWANXXXXXXXXXXXXVAWAYFLL 634 L+T+EGW+ A+FLL Sbjct: 111 PLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140
>sp|Q9TM17|PSAL_CYACA Photosystem I reaction center subunit XI OS=Cyanidium caldarium GN=psaL PE=3 SV=1 Length = 152
Score = 114 bits (284), Expect = 6e-25 Identities = 58/148 (39%), Positives = 73/148 (49%) Frame = +2
Query: 191 IEPLNGDPFVGGLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVK 370 I+P +PFVG L TP+ SS + WYL NLP YR +SPLLRG+E+G+AHG+ ++GPF K Sbjct: 5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYK 64
Query: 371 TGPLRNTDXXXXXXXXXXXXXXXXXXXCLTIYGVATFKEGAPSLAPYLTLTGRKKEADKL 550 GPLRNTD + IYG+ TF + DKL Sbjct: 65 LGPLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTF--------------DNSENNDKL 110
Query: 551 QTAEGWANXXXXXXXXXXXXVAWAYFLL 634 QTA GW +AY LL Sbjct: 111 QTANGWRQLASGFLLGAVGGAGFAYILL 138
>sp|P25902|PSAL_SYNEN Photosystem I reaction center subunit XI OS=Synechococcus elongatus naegeli GN=psaL PE=3 SV=2 Length = 149
Score = 113 bits (282), Expect = 1e-24 Identities = 57/150 (38%), Positives = 83/150 (55%) Frame = +2
Query: 185 QVIEPLNGDPFVGGLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPF 364 ++++P NGDPFVG L TPI+ S L+ ++ NLPAYR +SP+L G+EVG+AHG+ L+GP+ Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPW 63
Query: 365 VKTGPLRNTDXXXXXXXXXXXXXXXXXXXCLTIYGVATFKEGAPSLAPYLTLTGRKKEAD 544 VK GPLR++D CL YG+ +F++G S +D Sbjct: 64 VKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSS-------------SD 110
Query: 545 KLQTAEGWANXXXXXXXXXXXXVAWAYFLL 634 L+T+EGW+ A+FLL Sbjct: 111 PLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140
>sp|O78469|PSAL_GUITH Photosystem I reaction center subunit XI OS=Guillardia theta GN=psaL PE=3 SV=1 Length = 152
Score = 109 bits (273), Expect = 1e-23 Identities = 58/150 (38%), Positives = 76/150 (50%) Frame = +2
Query: 185 QVIEPLNGDPFVGGLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPF 364 Q ++P N DPFVG L TPIT+S LSNLPAYR +SPLLRG+E+G+ HG+ LVGPF Sbjct: 3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPF 62
Query: 365 VKTGPLRNTDXXXXXXXXXXXXXXXXXXXCLTIYGVATFKEGAPSLAPYLTLTGRKKEAD 544 K GPLRN++ CL IYGV +F + Sbjct: 63 YKLGPLRNSEVALLAGVFSALGLIIIMAACLAIYGVVSF--------------NTNDGGE 108
Query: 545 KLQTAEGWANXXXXXXXXXXXXVAWAYFLL 634 +LQ+A+GW ++AY L+ Sbjct: 109 QLQSAKGWRQFTSGWLVGSIGGASFAYILI 138
>sp|P51222|PSAL_PORPU Photosystem I reaction center subunit XI OS=Porphyra purpurea GN=psaL PE=3 SV=1 Length = 153
Score = 108 bits (271), Expect = 2e-23 Identities = 59/150 (39%), Positives = 74/150 (49%) Frame = +2
Query: 185 QVIEPLNGDPFVGGLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPF 364 + I+P N DPFVG L TP+++S L NLPAYR +SPLLRG+E+G+AHG+ L+GPF Sbjct: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPF 62
Query: 365 VKTGPLRNTDXXXXXXXXXXXXXXXXXXXCLTIYGVATFKEGAPSLAPYLTLTGRKKEAD 544 K GPLR TD CL++YG +F R D Sbjct: 63 DKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RSDSKD 108
Query: 545 KLQTAEGWANXXXXXXXXXXXXVAWAYFLL 634 LQTAEGW +AY LL Sbjct: 109 PLQTAEGWGQFTAGFLVGAVGGSGFAYLLL 138
>sp|P49486|PSAL_ODOSI Photosystem I reaction center subunit XI OS=Odontella sinensis GN=psaL PE=3 SV=1 Length = 150
Score = 108 bits (269), Expect = 3e-23 Identities = 58/126 (46%), Positives = 73/126 (57%) Frame = +2
Query: 191 IEPLNGDPFVGGLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVK 370 I+P N DPFVG L TPITSS + L NLPAYR ++PLLRG+E+GLAHG+ L+GPFVK Sbjct: 5 IKPYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVK 64
Query: 371 TGPLRNTDXXXXXXXXXXXXXXXXXXXCLTIYGVATFKEGAPSLAPYLTLTGRKKEADKL 550 GPLRN+D LTIYGVA F +G + + ++ L Sbjct: 65 LGPLRNSDIALFSGFLSTIGLILILTLGLTIYGVAAFGQGQTT-----------ENSNDL 113
Query: 551 QTAEGW 568 QT + W Sbjct: 114 QTKKAW 119
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S7M7 |
Definition |
tr|A9S7M7|A9S7M7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
157 |
Score (bit) |
217.0 |
E-value |
6.0e-55 |
Report |
|