BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952867|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_E03, 5'
         (593 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P59594|SPIKE_CVHSA Spike glycoprotein OS=Human SARS coronavir...    31   5.3  
sp|Q3LZX1|SPIKE_BCHK3 Spike glycoprotein OS=Bat coronavirus HKU3...    30   9.1  
sp|Q9QZE2|MIST_MOUSE Mast cell immunoreceptor signal transducer ...    30   9.1  

>sp|P59594|SPIKE_CVHSA Spike glycoprotein OS=Human SARS coronavirus
           GN=S PE=1 SV=1
          Length = 1255

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
 Frame = +1

Query: 190 LRMQRKSGNKK*IFENIFPNRD---FCWKSMFPI------PTGFELSKPLLLFPNQIELN 342
           L +  KSGN K + E +F N+D   + +K   PI      P+GF   KP+   P  I + 
Sbjct: 170 LDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINIT 229

Query: 343 S 345
           +
Sbjct: 230 N 230


>sp|Q3LZX1|SPIKE_BCHK3 Spike glycoprotein OS=Bat coronavirus HKU3
           GN=S PE=3 SV=1
          Length = 1242

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
 Frame = +1

Query: 205 KSGNKK*IFENIFPNRDFCWKSMFP----------IPTGFELSKPLLLFPNQIELNS 345
           K+GN K + E +F NRD  + S++           +PTGF + KP+L  P  I + S
Sbjct: 179 KTGNFKDLREYVFKNRDG-FLSVYQTYTAVNLPRGLPTGFSVLKPILKLPFGINITS 234


>sp|Q9QZE2|MIST_MOUSE Mast cell immunoreceptor signal transducer
           OS=Mus musculus GN=Mist PE=1 SV=1
          Length = 435

 Score = 30.0 bits (66), Expect = 9.1
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = +2

Query: 110 LKEEKKKNFSFTTKL*KDVGPPSCLSIYGCNVKVVIKSRFLRISSQIGI---FAGNQCFP 280
           +KE K   F       K    P  L ++  N    +K RFL  + Q  +     GN+ F 
Sbjct: 324 MKENKDGTFLVRDCSTKSKAEPYVLVVFYGNKVYNVKIRFLESNQQFALGTGLRGNEMFD 383

Query: 281 SQPDLSCLSHFSFFQIKL 334
           S  D+  + H+++F I L
Sbjct: 384 SVEDI--IEHYTYFPILL 399

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952867|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_E03, 5'
         (593 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******