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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952874
Clone id TST38A01NGRL0015_E10
Library
Length 599
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_E10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TGGACTTCTGGAACATGATGTTGCAAAGAAGGCATTCGAACGTAAGAAGAAAAATCAGGC
CAGCCAGAAACTGGGATCTCCGATCAAGCAGGTAAAAGAGAAGTCTGAGGTAAAGGTGTC
TACATCTGTTGTGAAATCCCAGAAGAAGTCTTCTGCAGAGAAACTAAGCAAGAAAAGTAC
CACACCAAATGGTGAAAGCAAACAATCAAAGGTCAAGAGAGAGCGAGATTCTGATGATGA
AGATGACGACTTTATTATTAAACCGAAAAAGAAAGCGAAGGCCAACACGTAGCACTTTGT
GAGCTTGGTTAAGGTGTACAGGAGGCACGATGATCAACGAGAAGTGGAAGCCTACGTGTG
ACGGGTCCAAGGCCAATGTAAATTGTAAGCTTCACTGTGTAAAGCTCTTATGAAGTAAAG
CACTAGGTGAGGAGAAGTTCTAAAGTTTGGCTTTGCACATTTACCACTTCAGATTCTTAA
TGATTGTTCCCAGGAAGGATCGAAGCCAAAGATATGTTGGGGGCTGAGAGCATGTTTAGT
TCTTCTTTTGTGGTAGACCATCAGTACGCTAGCACGAAACATATTGTCTCTCCTCTCTG
■■Homology search results ■■ -
sp_hit_id Q8QHK3
Definition sp|Q8QHK3|VSP1_CROAT Catroxase-1 OS=Crotalus atrox
Align length 80
Score (bit) 30.8
E-value 5.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952874|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_E10, 5'
         (599 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8QHK3|VSP1_CROAT Catroxase-1 OS=Crotalus atrox PE=2 SV=1           31   5.5  
sp|O13062|VSPC_TRIGA Venom serine proteinase 2C OS=Trimeresurus ...    30   9.3  
sp|P84787|VSP2_TRIEL Thrombin-like enzyme elegaxobin-2 OS=Trimer...    30   9.3  
sp|Q71QI7|VSP11_TRIST Venom serine protease KN11 OS=Trimeresurus...    30   9.3  
sp|Q71QI5|VSP03_TRIST Venom serine protease KN3 OS=Trimeresurus ...    30   9.3  
sp|Q71QJ0|VSP02_TRIST Venom serine protease KN2 OS=Trimeresurus ...    30   9.3  
sp|Q9WV70|NOC2L_MOUSE Nucleolar complex protein 2 homolog OS=Mus...    30   9.3  

>sp|Q8QHK3|VSP1_CROAT Catroxase-1 OS=Crotalus atrox PE=2 SV=1
          Length = 262

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
 Frame = +3

Query: 321 GGTMINEKWKPT---CDGSKANVNCKLHCVKLL---*SKALGEEKF*SLALHIYHF--RF 476
           GGT+INE+W  T   C+G+K  ++  +H  K+        + +EKF  ++   Y F  + 
Sbjct: 50  GGTLINEEWVLTAAHCEGNKMKIHLGVHSKKVPNKDKQTRVAKEKFFCVSSKNYTFWDKD 109

Query: 477 LMIVPRKDRSQRYVGG*EHV 536
           +M++    R  R V   EH+
Sbjct: 110 IMLI----RLDRPVSNSEHI 125


>sp|O13062|VSPC_TRIGA Venom serine proteinase 2C OS=Trimeresurus
           gramineus GN=TLG2C PE=2 SV=1
          Length = 257

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +3

Query: 321 GGTMINEKWKPT---CDGSKANVNCKLH 395
           GGT+INE+W  T   CDG K  +   LH
Sbjct: 50  GGTLINEEWVLTAAHCDGKKMKLQFGLH 77


>sp|P84787|VSP2_TRIEL Thrombin-like enzyme elegaxobin-2
           OS=Trimeresurus elegans PE=1 SV=1
          Length = 233

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = +3

Query: 321 GGTMINEKWKPT---CDGSKANVNCKLHCVKL 407
           GGT+INE+W  T   CDG    ++  +H  K+
Sbjct: 26  GGTLINEEWVLTAAHCDGENMEIHLGMHSKKV 57


>sp|Q71QI7|VSP11_TRIST Venom serine protease KN11 OS=Trimeresurus
           stejnegeri PE=2 SV=1
          Length = 257

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +3

Query: 321 GGTMINEKWKPT---CDGSKANVNCKLH 395
           GGT+INE+W  T   CDG K  +   LH
Sbjct: 50  GGTLINEEWVLTAAHCDGKKMKLQFGLH 77


>sp|Q71QI5|VSP03_TRIST Venom serine protease KN3 OS=Trimeresurus
           stejnegeri PE=2 SV=1
          Length = 257

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +3

Query: 321 GGTMINEKWKPT---CDGSKANVNCKLH 395
           GGT+INE+W  T   CDG K  +   LH
Sbjct: 50  GGTLINEEWVLTAAHCDGKKMKLRFGLH 77


>sp|Q71QJ0|VSP02_TRIST Venom serine protease KN2 OS=Trimeresurus
           stejnegeri PE=2 SV=1
          Length = 257

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +3

Query: 321 GGTMINEKWKPT---CDGSKANVNCKLH 395
           GGT+INE+W  T   CDG K  +   LH
Sbjct: 50  GGTLINEEWVLTAAHCDGKKMKLQFGLH 77


>sp|Q9WV70|NOC2L_MOUSE Nucleolar complex protein 2 homolog OS=Mus
           musculus GN=Noc2l PE=2 SV=2
          Length = 747

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -2

Query: 499 SFLGTIIKNLKW*MCKAKL*NFSSPSALLHKSFTQ*SLQFTLALDPSHVGFH-FSLIIVP 323
           +FLG I+K +   +   +   F+SPS L   SF Q +L   LALDPS    H F  I   
Sbjct: 328 AFLGPILKQMY--IMYVRNCKFTSPSTLPLISFMQRTLTEMLALDPSVSYQHAFLYIRQL 385

Query: 322 PVHLNQA 302
            VHL  A
Sbjct: 386 AVHLRNA 392
tr_hit_id A9NNA3
Definition tr|A9NNA3|A9NNA3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 28
Score (bit) 35.4
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952874|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_E10, 5'
         (599 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NNA3|A9NNA3_PICSI Putative uncharacterized protein OS=Picea...    35   2.5  
tr|A7NSV1|A7NSV1_VITVI Chromosome chr18 scaffold_1, whole genome...    35   4.3  
tr|A5ANR9|A5ANR9_VITVI Putative uncharacterized protein OS=Vitis...    35   4.3  

>tr|A9NNA3|A9NNA3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 226

 Score = 35.4 bits (80), Expect = 2.5
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = +2

Query: 2   GLLEHDVAKKAFERKKKNQASQKLGSPI 85
           GLL  + AKKA+ERK++ Q  QK G+P+
Sbjct: 155 GLLPPEKAKKAYERKQRKQQQQKTGTPV 182


>tr|A7NSV1|A7NSV1_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00014417001
           PE=4 SV=1
          Length = 223

 Score = 34.7 bits (78), Expect = 4.3
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +2

Query: 2   GLLEHDVAKKAFERKKKNQASQKLGSPI 85
           GLL  DVAKK +E+K K    QK+ SP+
Sbjct: 137 GLLPKDVAKKVYEKKLKKNQQQKVASPV 164


>tr|A5ANR9|A5ANR9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_027405 PE=4 SV=1
          Length = 149

 Score = 34.7 bits (78), Expect = 4.3
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +2

Query: 2   GLLEHDVAKKAFERKKKNQASQKLGSPI 85
           GLL  DVAKK +E+K K    QK+ SP+
Sbjct: 63  GLLPKDVAKKVYEKKLKKNQQQKVASPV 90