DK952876 |
Clone id |
TST38A01NGRL0015_E12 |
Library |
TST38 |
Length |
610 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_E12. 5' end sequence. |
Accession |
DK952876 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL466Contig1 |
Sequence |
GACAGGCAGCAGTGCCATGGGCATGAGGGCGATTCCGTATCATGAGAGCAGAGCAGCTTC GTCCCCACCCATGGAAAGGAGGCCGCATCGTCAAAATGTGATACGCTCTCTGACGTCGTC CTTCGCAGGCATGGTGAATACAGGACAGGTGGGCAGAATAGTGGTGAACTGTAGCGCAGG GGACAGCAGCTCCTCTGTCTCAACGACAACGGCAACACAAGCAGAGCAGAACGGGGAAGG GATGTCTTGGGCAGCGGTGATTCCGGTGTCCGCGCTGCCCAAGGGTGAGCGCAGGTTAGT GCGTCAGGACGACCAGGATGTACTCCTACTCTGGTACAAAGGTGAGGTAGTTGCCATTGA GAACACATCGCCTGCGGAAGGTGCCTACAGCGAGGGTTTTGTCAATGCCAAACTTACGCA GGATGGCTGCATTGTTTGCCCTTCCACAGAGAGCACCTTTGACTTGAAGACTGGAGAGAT CAAAGAGTGGTTTCCCTCAAATCCTGTGTTGAGGTTGCTGACCCCCCCTCTGAGGAAATT AACTACGTATCCTGTCAAGATTGACTCGGATTACATTTATATCAGCACACAGTCCTCCTC CTCTGTGGAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7NJB9 |
Definition |
sp|Q7NJB9|Y1913_GLOVI UPF0161 protein gsl1913 OS=Gloeobacter violaceus |
Align length |
43 |
Score (bit) |
32.7 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LNL5 |
Definition |
tr|B8LNL5|B8LNL5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
117 |
Score (bit) |
147.0 |
E-value |
6.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952876|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_E12, 5' (610 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LNL5|B8LNL5_PICSI Putative uncharacterized protein OS=Picea... 147 6e-34 tr|Q9C9I7|Q9C9I7_ARATH Putative uncharacterized protein F26A9.12... 145 2e-33 tr|Q53N80|Q53N80_ORYSJ Os11g0242400 protein OS=Oryza sativa subs... 143 9e-33 tr|A7PPZ6|A7PPZ6_VITVI Chromosome chr18 scaffold_24, whole genom... 143 9e-33 tr|A2ZCZ7|A2ZCZ7_ORYSI Putative uncharacterized protein OS=Oryza... 143 9e-33 tr|B6U301|B6U301_MAIZE Rieske domain containing protein OS=Zea m... 141 3e-32 tr|B4FJL4|B4FJL4_MAIZE Putative uncharacterized protein OS=Zea m... 141 3e-32 tr|A5C791|A5C791_VITVI Putative uncharacterized protein OS=Vitis... 140 4e-32 tr|A9TN65|A9TN65_PHYPA Predicted protein (Fragment) OS=Physcomit... 134 3e-30 tr|A7QHV1|A7QHV1_VITVI Chromosome undetermined scaffold_100, who... 110 8e-23 tr|A4RVD0|A4RVD0_OSTLU Predicted protein (Fragment) OS=Ostreococ... 106 9e-22 tr|Q01BP0|Q01BP0_OSTTA Rieske (ISS) OS=Ostreococcus tauri GN=Ot0... 104 4e-21 tr|A8J4Q7|A8J4Q7_CHLRE Rieske [2Fe-2S] protein OS=Chlamydomonas ... 96 2e-18 tr|A5BKA0|A5BKA0_VITVI Putative uncharacterized protein OS=Vitis... 78 4e-13 tr|A3IQW7|A3IQW7_9CHRO Rieske (2Fe-2S) region OS=Cyanothece sp. ... 61 6e-08 tr|B1WRW3|B1WRW3_CYAA5 Putative uncharacterized protein OS=Cyano... 60 1e-07 tr|B7K3M9|B7K3M9_SYNP8 Rieske (2Fe-2S) domain protein OS=Synecho... 59 2e-07 tr|B4C1K4|B4C1K4_9CHRO Rieske (2Fe-2S) domain protein OS=Cyanoth... 59 2e-07 tr|B7KFC2|B7KFC2_9CHRO Rieske (2Fe-2S) domain protein OS=Cyanoth... 58 4e-07 tr|B4AXJ6|B4AXJ6_9CHRO Rieske (2Fe-2S) domain protein OS=Cyanoth... 57 6e-07 tr|A0ZMK5|A0ZMK5_NODSP Rieske (2Fe-2S) region protein OS=Nodular... 55 4e-06 tr|B0C5T4|B0C5T4_ACAM1 Rieske, 2Fe-2S protein, putative OS=Acary... 50 8e-05 tr|A8YKW3|A8YKW3_MICAE Genome sequencing data, contig C325 OS=Mi... 49 2e-04 tr|B0JJI9|B0JJI9_MICAN Putative uncharacterized protein OS=Micro... 47 9e-04 tr|B2J316|B2J316_NOSP7 Rieske (2Fe-2S) domain protein OS=Nostoc ... 47 0.001 tr|Q8YYC9|Q8YYC9_ANASP All0921 protein OS=Anabaena sp. (strain P... 45 0.003 tr|Q3M4G6|Q3M4G6_ANAVT Rieske (2Fe-2S) region OS=Anabaena variab... 45 0.003 tr|Q5X0Y2|Q5X0Y2_LEGPA Putative uncharacterized protein OS=Legio... 44 0.010 tr|A5II86|A5II86_LEGPC Putative uncharacterized protein OS=Legio... 44 0.010 tr|Q5WSR2|Q5WSR2_LEGPL Putative uncharacterized protein OS=Legio... 43 0.013
>tr|B8LNL5|B8LNL5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 302
Score = 147 bits (370), Expect = 6e-34 Identities = 68/117 (58%), Positives = 81/117 (69%) Frame = +2
Query: 236 EGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAKL 415 + +W V+P SALPKGE WYK EVVAIEN SPAEGAYSEG VNAKL Sbjct: 91 DNKNWVPVVPASALPKGERRLIRQDGDNILLLWYKNEVVAIENKSPAEGAYSEGLVNAKL 150
Query: 416 TQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYIS 586 TQDGCI+CP+T+STF+LKTG+I+EW+P+NPV YP K+DS+YIYIS Sbjct: 151 TQDGCIMCPTTDSTFNLKTGDIEEWYPNNPVLRLLTPPIRKLFVYPTKVDSEYIYIS 207
>tr|Q9C9I7|Q9C9I7_ARATH Putative uncharacterized protein F26A9.12 (Putative uncharacterized protein At1g71500) (Putative uncharacterized protein) (Putative uncharacterized protein At1g71500/F26A9_12) OS=Arabidopsis thaliana GN=At1g71500/F26A9_12 PE=2 SV=1 Length = 287
Score = 145 bits (365), Expect = 2e-33 Identities = 68/124 (54%), Positives = 81/124 (65%) Frame = +2
Query: 239 GMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAKLT 418 G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NA+LT Sbjct: 78 GRNWVPVVPLSALPKGERRVVIQDDETILLLWYKNDVFAIENRSPAEGAYSEGLLNARLT 137
Query: 419 QDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQSS 598 QDGCIVCPST+STFDL+TGEI+EW+P NPV YPVK D + IYIS + S Sbjct: 138 QDGCIVCPSTDSTFDLRTGEIREWYPKNPVLRVLTPALRKLFVYPVKYDEENIYISIRDS 197
Query: 599 SSVD 610 + Sbjct: 198 GKTE 201
>tr|Q53N80|Q53N80_ORYSJ Os11g0242400 protein OS=Oryza sativa subsp. japonica GN=Os11g0242400 PE=2 SV=1 Length = 277
Score = 143 bits (360), Expect = 9e-33 Identities = 70/146 (47%), Positives = 90/146 (61%) Frame = +2
Query: 161 VVNCSAGDXXXXXXXXXXXQAEQNGEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYK 340 VV C A + +A +G +W V+P++ALP+GE WYK Sbjct: 44 VVGCRAAEVSGAEPSAAAGEASGDG---NWVPVVPLAALPRGERRVIVQDGEEILLLWYK 100
Query: 341 GEVVAIENTSPAEGAYSEGFVNAKLTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXX 520 +V A+EN SPAEGAY+EG +NAKLTQDGCIVCP+T+STFDL+TGEIKEW+P+NPV Sbjct: 101 EQVYAVENRSPAEGAYTEGLLNAKLTQDGCIVCPTTDSTFDLRTGEIKEWYPNNPVLRAL 160
Query: 521 XXXXXXXXXYPVKIDSDYIYISTQSS 598 YPVKID + IYIS + + Sbjct: 161 TPALRKLFVYPVKIDGENIYISIKGA 186
>tr|A7PPZ6|A7PPZ6_VITVI Chromosome chr18 scaffold_24, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021852001 PE=4 SV=1 Length = 280
Score = 143 bits (360), Expect = 9e-33 Identities = 69/126 (54%), Positives = 80/126 (63%) Frame = +2
Query: 233 GEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAK 412 G+G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NAK Sbjct: 69 GDGGNWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPAEGAYSEGLLNAK 128
Query: 413 LTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQ 592 LTQDGCIVCP+T+STFDL+TGEIK+W+P NPV YPVK D IYI Sbjct: 129 LTQDGCIVCPTTDSTFDLQTGEIKDWYPKNPVLRVLTPALRTLFIYPVKTDDKNIYIRMS 188
Query: 593 SSSSVD 610 S D Sbjct: 189 GGVSSD 194
>tr|A2ZCZ7|A2ZCZ7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35659 PE=4 SV=1 Length = 277
Score = 143 bits (360), Expect = 9e-33 Identities = 70/146 (47%), Positives = 90/146 (61%) Frame = +2
Query: 161 VVNCSAGDXXXXXXXXXXXQAEQNGEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYK 340 VV C A + +A +G +W V+P++ALP+GE WYK Sbjct: 44 VVGCRAAEVSGAEPSAAAGEASGDG---NWVPVVPLAALPRGERRVIVQDGEEILLLWYK 100
Query: 341 GEVVAIENTSPAEGAYSEGFVNAKLTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXX 520 +V A+EN SPAEGAY+EG +NAKLTQDGCIVCP+T+STFDL+TGEIKEW+P+NPV Sbjct: 101 EQVYAVENRSPAEGAYTEGLLNAKLTQDGCIVCPTTDSTFDLRTGEIKEWYPNNPVLRAL 160
Query: 521 XXXXXXXXXYPVKIDSDYIYISTQSS 598 YPVKID + IYIS + + Sbjct: 161 TPALRKLFVYPVKIDGENIYISIKGA 186
>tr|B6U301|B6U301_MAIZE Rieske domain containing protein OS=Zea mays PE=2 SV=1 Length = 276
Score = 141 bits (356), Expect = 3e-32 Identities = 69/139 (49%), Positives = 82/139 (58%) Frame = +2
Query: 170 CSAGDXXXXXXXXXXXQAEQNGEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEV 349 C A + + G G SW V+P++ALP+GE WYK +V Sbjct: 45 CRAAEVSGAESSSAAAEGAGGGGGASWVPVVPLAALPRGERRVIVQDGEEILLLWYKNQV 104
Query: 350 VAIENTSPAEGAYSEGFVNAKLTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXX 529 AIEN SPAEGAY+EG +NAKLTQDGCIVCPST+STFDL+TGEIKEW+P NPV Sbjct: 105 FAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGEIKEWYPKNPVLRALTPA 164
Query: 530 XXXXXXYPVKIDSDYIYIS 586 Y VK D + IYIS Sbjct: 165 LRKLFTYRVKTDEENIYIS 183
>tr|B4FJL4|B4FJL4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 276
Score = 141 bits (356), Expect = 3e-32 Identities = 69/139 (49%), Positives = 82/139 (58%) Frame = +2
Query: 170 CSAGDXXXXXXXXXXXQAEQNGEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEV 349 C A + + G G SW V+P++ALP+GE WYK +V Sbjct: 45 CRAAEVSGAESSSAAAEGAGGGGGASWVPVVPLAALPRGERRVIVQDGEEILLLWYKNQV 104
Query: 350 VAIENTSPAEGAYSEGFVNAKLTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXX 529 AIEN SPAEGAY+EG +NAKLTQDGCIVCPST+STFDL+TGEIKEW+P NPV Sbjct: 105 FAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGEIKEWYPKNPVLRALTPA 164
Query: 530 XXXXXXYPVKIDSDYIYIS 586 Y VK D + IYIS Sbjct: 165 LRKLFTYRVKTDEENIYIS 183
>tr|A5C791|A5C791_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018103 PE=4 SV=1 Length = 326
Score = 140 bits (354), Expect = 4e-32 Identities = 69/126 (54%), Positives = 80/126 (63%) Frame = +2
Query: 233 GEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAK 412 G+G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NAK Sbjct: 69 GDGGNWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPAEGAYSEGLLNAK 128
Query: 413 LTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQ 592 LTQDGCIVCP+T+STFDL+TG IK+W+P NPV YPVK D IYI Sbjct: 129 LTQDGCIVCPTTDSTFDLQTGXIKDWYPKNPVLRVLXPALRTLFIYPVKTDDKNIYIRMS 188
Query: 593 SSSSVD 610 S D Sbjct: 189 GGVSSD 194
>tr|A9TN65|A9TN65_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_46753 PE=4 SV=1 Length = 222
Score = 134 bits (338), Expect = 3e-30 Identities = 61/116 (52%), Positives = 78/116 (67%) Frame = +2
Query: 245 SWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAKLTQD 424 +W VIP++ALP+GE WYK +V AIEN SPAEGAYSEG +NA+LT D Sbjct: 19 NWVPVIPLAALPRGERRLVRQDGETVLLLWYKNDVYAIENQSPAEGAYSEGLINARLTPD 78
Query: 425 GCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQ 592 GCIVCPSTEST+DLK+G++KEW P+NPV YPVK++ + IYI+ + Sbjct: 79 GCIVCPSTESTYDLKSGKVKEWMPTNPVLRVLTPSLRDLVTYPVKVEDESIYINVR 134
>tr|A7QHV1|A7QHV1_VITVI Chromosome undetermined scaffold_100, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013807001 PE=4 SV=1 Length = 149
Score = 110 bits (274), Expect = 8e-23 Identities = 60/139 (43%), Positives = 78/139 (56%) Frame = +2
Query: 59 SSPPMERRPHRQNVIRSLTSSFAGMVNTGQVGRIVVNCSAGDXXXXXXXXXXXQAEQNGE 238 SSP R+P ++ L + T + R + C A + ++ G+ Sbjct: 17 SSPLRRRKPLLHHLPPPLPRNDRSSALTLGLSRRRITCKATEVSVAE------ESSAAGD 70
Query: 239 GMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAKLT 418 G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NAKLT Sbjct: 71 GENWVPVVPLSALPKGERRVIIQDTETILLLWYKDQVYAIENRSPAEGAYSEGLLNAKLT 130
Query: 419 QDGCIVCPSTESTFDLKTG 475 QDGCIVCP+T+S FDL+TG Sbjct: 131 QDGCIVCPTTDSIFDLQTG 149
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