NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952903
Clone id TST38A01NGRL0015_F16
Library
Length 616
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_F16. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CGGGCTGCGTCTCCTTGACACCGGGGCTTGCCATTTTCATCCTGCTCTGCACATTTCTTC
ATACTCCCAAGCTCCTCTCCCAGCTGCTCTGCAGTACTTCTCTGCATTCTATTTCGCCAC
CATCTTTTGCATATACGTAGATCTCCTAGCACTGCGTTTGATTTGCTTCTTTTCAATACA
GCTATGGGCTTTCGGATTGTGCCCGCGCTGCTTGTAGCTTTTGCTTGCATCCATTACGTA
GCGCTCGCTTCTATCGACGATAACCTCGCTGCCAGCGCCAAGAAATACAAATCCTGCAAG
AAGAGGGCTGCCACTCTCTGCGGGCCTAGCTCCTTCACCTTCTACCTGCACAACACCGTC
TACAACCCCGCCGTCGACAACGCCAATAACTTCACCTCTGTGTATGGCGTGCAACCTAAT
GTGACGTGGACCAATACCTACGCCTTCGGCACCACCTCCACATTCGAGGACCCGCTCACA
AGCGGGCCCGCCACCGACTCGCAGCAGATAGGCGTAGCTCACGGCTTCTGGCAGCTCAAC
AGCAAGGTAGGCTACACTCTCTTCCACATCTTCACCGCCAACATTACCGAGGGGCGACCA
CAAGGGCACCATCGAC
■■Homology search results ■■ -
sp_hit_id P13240
Definition sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum
Align length 96
Score (bit) 46.6
E-value 0.0001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952903|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_F16, 5'
         (616 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13240|DR206_PEA Disease resistance response protein 206 OS=P...    47   1e-04
sp|Q9NZV5|SELN_HUMAN Selenoprotein N OS=Homo sapiens GN=SEPN1 PE...    30   7.6  

>sp|P13240|DR206_PEA Disease resistance response protein 206
           OS=Pisum sativum GN=PI206 PE=2 SV=2
          Length = 184

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
 Frame = +1

Query: 331 SFTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYA----FGTTSTFEDPLTSGPATD 498
           +  FY H+ +YN    NA N TS     P        A    FG    F+DP+T   +  
Sbjct: 33  NLVFYFHDILYNGK--NAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLS 90

Query: 499 SQQIGVAHGFWQLNSKVGYTLFHIFTANITEGRPQG 606
           S+Q+G A GF+  ++K  YT +  FT  +     QG
Sbjct: 91  SKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQG 126


>sp|Q9NZV5|SELN_HUMAN Selenoprotein N OS=Homo sapiens GN=SEPN1 PE=1
           SV=4
          Length = 590

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 379 NANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTS 483
           NAN F  +  V+P    +N ++F  +STFEDP T+
Sbjct: 539 NANYFLDITSVKPEEIESNLFSF--SSTFEDPSTA 571
tr_hit_id Q9SYU1
Definition tr|Q9SYU1|Q9SYU1_PEA Pathogenesis-related protein OS=Pisum sativum
Align length 96
Score (bit) 44.3
E-value 0.006
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952903|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_F16, 5'
         (616 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9SYU1|Q9SYU1_PEA Pathogenesis-related protein OS=Pisum sativ...    44   0.006
tr|Q27JA9|Q27JA9_9CONI Dirigent-like protein pDIR3 OS=Picea enge...    44   0.010
tr|Q9SDQ9|Q9SDQ9_THUPL Dirigent protein OS=Thuja plicata GN=psd_...    43   0.017
tr|A7PW09|A7PW09_VITVI Chromosome chr8 scaffold_34, whole genome...    42   0.022
tr|Q943Q0|Q943Q0_ORYSJ Putative uncharacterized protein P0011G08...    42   0.029
tr|A2ZPF2|A2ZPF2_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.029
tr|Q9SDQ8|Q9SDQ8_THUPL Dirigent-like protein OS=Thuja plicata GN...    42   0.038
tr|A7NXR4|A7NXR4_VITVI Chromosome chr5 scaffold_2, whole genome ...    42   0.038
tr|Q9FIG7|Q9FIG7_ARATH Disease resistance response protein-like ...    41   0.064
tr|Q45W75|Q45W75_ARAHY Disease resistance-responsive family prot...    41   0.064
tr|Q27JA5|Q27JA5_PICGL Dirigent-like protein pDIR7 OS=Picea glau...    40   0.084
tr|A7NXR5|A7NXR5_VITVI Chromosome chr5 scaffold_2, whole genome ...    40   0.084
tr|A6YQZ8|A6YQZ8_PICSI Dirigent-like protein (Putative uncharact...    40   0.084
tr|A2WKV1|A2WKV1_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.084
tr|Q9SDR5|Q9SDR5_THUPL Dirigent-like protein OS=Thuja plicata GN...    40   0.11 
tr|A7P029|A7P029_VITVI Chromosome chr6 scaffold_3, whole genome ...    40   0.11 
tr|A5AKQ8|A5AKQ8_VITVI Putative uncharacterized protein OS=Vitis...    40   0.11 
tr|B2WS85|B2WS85_9BRAS Disease resistance-responsive family prot...    40   0.14 
tr|A9PBN6|A9PBN6_POPTR Putative uncharacterized protein OS=Popul...    40   0.14 
tr|A7P032|A7P032_VITVI Chromosome chr6 scaffold_3, whole genome ...    40   0.14 
tr|A5BN88|A5BN88_VITVI Putative uncharacterized protein (Fragmen...    40   0.14 
tr|A5BN87|A5BN87_VITVI Putative uncharacterized protein (Fragmen...    40   0.14 
tr|Q9T017|Q9T017_ARATH Putative disease resistance response prot...    39   0.19 
tr|Q53NP9|Q53NP9_ORYSJ Dirigent-like protein OS=Oryza sativa sub...    39   0.19 
tr|Q0IU79|Q0IU79_ORYSJ Os11g0179700 protein OS=Oryza sativa subs...    39   0.19 
tr|A7P031|A7P031_VITVI Chromosome chr6 scaffold_3, whole genome ...    39   0.19 
tr|A2ZC34|A2ZC34_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.19 
tr|Q9LIQ5|Q9LIQ5_ARATH Similarity to disease resistance response...    39   0.24 
tr|Q7Y225|Q7Y225_ARATH At3g24020 (Putative uncharacterized prote...    39   0.24 
tr|Q27J96|Q27J96_PICSI Dirigent protein pDIR16 OS=Picea sitchens...    39   0.24 

>tr|Q9SYU1|Q9SYU1_PEA Pathogenesis-related protein OS=Pisum sativum
           GN=DRR206-c PE=4 SV=1
          Length = 184

 Score = 44.3 bits (103), Expect = 0.006
 Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
 Frame = +1

Query: 331 SFTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYA----FGTTSTFEDPLTSGPATD 498
           +   Y H+ +YN    NA N TS     P        A    FG    F+DP+T   +  
Sbjct: 33  NLVLYFHDILYNGK--NAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLS 90

Query: 499 SQQIGVAHGFWQLNSKVGYTLFHIFTANITEGRPQG 606
           S+Q+G A GF+  ++K  YT +  FT  +     QG
Sbjct: 91  SKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQG 126


>tr|Q27JA9|Q27JA9_9CONI Dirigent-like protein pDIR3 OS=Picea
           engelmannii x Picea glauca PE=2 SV=1
          Length = 188

 Score = 43.5 bits (101), Expect = 0.010
 Identities = 36/137 (26%), Positives = 54/137 (39%)
 Frame = +1

Query: 196 IVPALLVAFACIHYVALASIDDNLXXXXXXXXXXXXXXXTLCGPSSFTFYLHNTVYNPAV 375
           IVPALL+   C  ++A A  +  +                    S   FY H+ V     
Sbjct: 12  IVPALLLLSLCCLHIAEAEAEAKVKLGREKI-------------SHLHFYFHDLV----- 53

Query: 376 DNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIGVAHGFWQLNSKVGY 555
            +  N T+V       T ++   FGT    +D LT GPA  S+ +G A G +  +S+  +
Sbjct: 54  -SGKNVTAVKVASAPTTNSSATLFGTVMVMDDWLTEGPAATSKMVGRAQGIYVSSSQEKF 112

Query: 556 TLFHIFTANITEGRPQG 606
            L    T     G+  G
Sbjct: 113 HLLMASTFVFESGKYNG 129


>tr|Q9SDQ9|Q9SDQ9_THUPL Dirigent protein OS=Thuja plicata GN=psd_Tp7
           PE=2 SV=1
          Length = 192

 Score = 42.7 bits (99), Expect = 0.017
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = +1

Query: 331 SFTFYLHNTVYNPAVDNANNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 498
           +   Y H+ +YN    NA N TS     P   N+T  T  Y FG  S F+DP+T      
Sbjct: 41  NLVLYFHDIIYNGK--NAGNATSTLVAAPQGANLTIMTGNYHFGDLSVFDDPITVDNNLH 98

Query: 499 SQQIGVAHGFWQLNSKVGYTLFHIFT 576
           S  +G A GF+  + K  ++ +  FT
Sbjct: 99  SPPVGRAQGFYFYDMKNTFSAWLGFT 124


>tr|A7PW09|A7PW09_VITVI Chromosome chr8 scaffold_34, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00025429001
           PE=4 SV=1
          Length = 188

 Score = 42.4 bits (98), Expect = 0.022
 Identities = 27/93 (29%), Positives = 40/93 (43%)
 Frame = +1

Query: 328 SSFTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQ 507
           S   FY H+ +  P      N T V   +  VT  +   FG  +  +DPLT GP   S+ 
Sbjct: 43  SHLHFYFHDVITGP------NPTVVRVAEAAVTNKSATLFGGVAVLDDPLTVGPEPSSKL 96

Query: 508 IGVAHGFWQLNSKVGYTLFHIFTANITEGRPQG 606
           +G A G +   S+  + L  +      EG+  G
Sbjct: 97  VGRAQGMYAAASQKEFGLLMVMNFAFMEGKYNG 129


>tr|Q943Q0|Q943Q0_ORYSJ Putative uncharacterized protein P0011G08.16
           OS=Oryza sativa subsp. japonica GN=P0011G08.16 PE=4 SV=1
          Length = 340

 Score = 42.0 bits (97), Expect = 0.029
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = +1

Query: 352 NTVYNPAVDNANNFTSVY--GVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIGVAHG 525
           N  +    +N NN   V+  G  P  T      FGT +  +D LT  P   S  +G A G
Sbjct: 186 NAAFTSNSNNNNNGVPVFAGGSLPQGTTLQKLLFGTMTVVDDELTEAPGLGSPAVGRAQG 245

Query: 526 FWQLNSKVGYTLFHIFTANITEG 594
           F+  +S+ G +   + TA   EG
Sbjct: 246 FYIASSEEGVSQTVVVTAMFKEG 268


>tr|A2ZPF2|A2ZPF2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_000424 PE=4 SV=1
          Length = 310

 Score = 42.0 bits (97), Expect = 0.029
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = +1

Query: 352 NTVYNPAVDNANNFTSVY--GVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQIGVAHG 525
           N  +    +N NN   V+  G  P  T      FGT +  +D LT  P   S  +G A G
Sbjct: 156 NAAFTSNSNNNNNGVPVFAGGSLPQGTTLQKLLFGTMTVVDDELTEAPGLGSPAVGRAQG 215

Query: 526 FWQLNSKVGYTLFHIFTANITEG 594
           F+  +S+ G +   + TA   EG
Sbjct: 216 FYIASSEEGVSQTVVVTAMFKEG 238


>tr|Q9SDQ8|Q9SDQ8_THUPL Dirigent-like protein OS=Thuja plicata
           GN=psd_Tp8 PE=2 SV=1
          Length = 192

 Score = 41.6 bits (96), Expect = 0.038
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = +1

Query: 331 SFTFYLHNTVYNPAVDNANNFTSVYGVQP---NVT-WTNTYAFGTTSTFEDPLTSGPATD 498
           +   Y H+ +YN    NA N TS     P   N+T  T  Y FG  + F+DP+T      
Sbjct: 41  NLVLYFHDIIYNGK--NAGNATSTLVAAPQGANLTIMTGNYHFGDLAVFDDPITVDNNLH 98

Query: 499 SQQIGVAHGFWQLNSKVGYTLFHIFT 576
           S  +G A GF+  + K  ++ +  FT
Sbjct: 99  SPPVGRAQGFYFYDMKNTFSAWLGFT 124


>tr|A7NXR4|A7NXR4_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020440001
           PE=4 SV=1
          Length = 249

 Score = 41.6 bits (96), Expect = 0.038
 Identities = 23/50 (46%), Positives = 28/50 (56%)
 Frame = +1

Query: 445 FGTTSTFEDPLTSGPATDSQQIGVAHGFWQLNSKVGYTLFHIFTANITEG 594
           FGT +  +D LTSGP   SQQ+G A G +  +S  G T    FTA I  G
Sbjct: 135 FGTITVIDDVLTSGPDLGSQQMGKAQGVYVASSVDGTTQMMTFTAMIEGG 184


>tr|Q9FIG7|Q9FIG7_ARATH Disease resistance response protein-like
           (At5g42500) (Putative uncharacterized protein At5g42500)
           OS=Arabidopsis thaliana GN=At5g42500 PE=2 SV=1
          Length = 185

 Score = 40.8 bits (94), Expect = 0.064
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
 Frame = +1

Query: 325 PSSFT---FYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPAT 495
           P  FT   FY H+ +      + +  T+V   +   T ++   FG     +DPLT GP  
Sbjct: 39  PDKFTHLHFYFHDVI------SGDKPTAVKVAEARRTNSSNVNFGVIMIADDPLTEGPDP 92

Query: 496 DSQQIGVAHGFWQLNSKVGYTLFHIFTANITEGRPQG 606
            S+++G A G + L +    +   +F    T G   G
Sbjct: 93  SSKEVGRAQGMYALTAMKNISFTMVFNLAFTAGEFNG 129


>tr|Q45W75|Q45W75_ARAHY Disease resistance-responsive family protein
           OS=Arachis hypogaea PE=2 SV=1
          Length = 203

 Score = 40.8 bits (94), Expect = 0.064
 Identities = 26/93 (27%), Positives = 39/93 (41%)
 Frame = +1

Query: 328 SSFTFYLHNTVYNPAVDNANNFTSVYGVQPNVTWTNTYAFGTTSTFEDPLTSGPATDSQQ 507
           S   FY H+ V  P        T++   +  VT  +   FG     +DPLT GP   S+ 
Sbjct: 46  SHLHFYFHDIVSGPKP------TAIRVAEAQVTKHSPTLFGAVVMIDDPLTVGPEPTSKL 99

Query: 508 IGVAHGFWQLNSKVGYTLFHIFTANITEGRPQG 606
           +G A G +   S+    L  +     +EG+  G
Sbjct: 100 VGKAQGIYASASQNDMGLLMVMNLEFSEGKYNG 132