DK952922 |
Clone id |
TST38A01NGRL0015_G11 |
Library |
TST38 |
Length |
580 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_G11. 5' end sequence. |
Accession |
DK952922 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL69Contig1 |
Sequence |
GGCTAAGAGGAGCGTGGGAGATCTTAAGGAGGCTGACCTCAAGGGCAAGAAGGTTTTTGT GAGGGCCGATTTGAATGTACCTCTTGATGACAGTTTGAAGATCACTGACGATACTCGCAT TCGTGCTGCCATTCCCACTATCAAGTACCTCACCGAGAATGGTGCCAAGGTCATCCTCAC TACCCATCTGGGGCGTCCCAAGGGTGTCACAGAGAAATTCAGATTGAACCCTTTGGTTCC AAGGTTGTCTGAACTACTAGGCTTCAAGGTGGAAAAGGCTGACGACTCGATCGGAGAGGA AGTGGAGAAGAAAGTGGCTGCTCTACCTGATGGTGGAGTGCTGCTTTTGGAGAATGTGAG GTTCTACAAGGAGGAAGAGAAGAATGAACCTGAGCATGCCAAGAAGCTTGCCTCTGTAGC TGATCTCTATGTCAATGATGCCTTTGGCACAGCTCACCGAGCTCATGCCTCTACTGAGGG TGTGACCAAGTATTTGAGCCCCTCAGTGGCTGGTTTTCTACTTCAAAAGGAACTTGATTA TTTGGATGGGGCTGTGTCCAACCCAACACGCCCTTTTGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P50318 |
Definition |
sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana |
Align length |
193 |
Score (bit) |
321.0 |
E-value |
2.0e-87 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952922|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0015_G11, 5' (580 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=A... 321 2e-87 sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fra... 320 4e-87 sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triti... 315 1e-85 sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=N... 315 1e-85 sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=T... 313 5e-85 sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicot... 306 5e-83 sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=C... 291 2e-78 sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=V... 288 1e-77 sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabil... 270 3e-72 sp|Q8YPR1|PGK_ANASP Phosphoglycerate kinase OS=Anabaena sp. (str... 268 1e-71 sp|Q10Z46|PGK_TRIEI Phosphoglycerate kinase OS=Trichodesmium ery... 250 4e-66 sp|Q7NI70|PGK_GLOVI Phosphoglycerate kinase OS=Gloeobacter viola... 249 5e-66 sp|B0CD95|PGK_ACAM1 Phosphoglycerate kinase OS=Acaryochloris mar... 249 5e-66 sp|A5GW73|PGK_SYNR3 Phosphoglycerate kinase OS=Synechococcus sp.... 248 2e-65 sp|Q31P73|PGK_SYNE7 Phosphoglycerate kinase OS=Synechococcus elo... 242 1e-63 sp|Q5N4Z6|PGK_SYNP6 Phosphoglycerate kinase OS=Synechococcus sp.... 240 4e-63 sp|A5GPB2|PGK_SYNPW Phosphoglycerate kinase OS=Synechococcus sp.... 239 6e-63 sp|A2BUH2|PGK_PROM5 Phosphoglycerate kinase OS=Prochlorococcus m... 239 6e-63 sp|Q3AGU1|PGK_SYNSC Phosphoglycerate kinase OS=Synechococcus sp.... 239 9e-63 sp|Q3AVX6|PGK_SYNS9 Phosphoglycerate kinase OS=Synechococcus sp.... 239 9e-63 sp|Q0I6M5|PGK_SYNS3 Phosphoglycerate kinase OS=Synechococcus sp.... 238 2e-62 sp|Q7V390|PGK_PROMP Phosphoglycerate kinase OS=Prochlorococcus m... 238 2e-62 sp|P74421|PGK_SYNY3 Phosphoglycerate kinase OS=Synechocystis sp.... 237 3e-62 sp|Q7V461|PGK_PROMM Phosphoglycerate kinase OS=Prochlorococcus m... 237 3e-62 sp|Q7VDZ4|PGK_PROMA Phosphoglycerate kinase OS=Prochlorococcus m... 237 4e-62 sp|Q8DGP7|PGK_THEEB Phosphoglycerate kinase OS=Thermosynechococc... 236 5e-62 sp|Q31CY6|PGK_PROM9 Phosphoglycerate kinase OS=Prochlorococcus m... 236 5e-62 sp|Q7U3V0|PGK_SYNPX Phosphoglycerate kinase OS=Synechococcus sp.... 236 6e-62 sp|A2CDG7|PGK_PROM3 Phosphoglycerate kinase OS=Prochlorococcus m... 236 8e-62 sp|A2BNZ0|PGK_PROMS Phosphoglycerate kinase OS=Prochlorococcus m... 235 1e-61
>sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2 Length = 478
Score = 321 bits (822), Expect = 2e-87 Identities = 164/193 (84%), Positives = 174/193 (90%) Frame = +2
Query: 2 AKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILT 181 AK+SVGDL DLKGKKVFVRADLNVPLDD+ ITDDTRIRAAIPTIK+L ENGAKVIL+ Sbjct: 75 AKKSVGDLNSVDLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKFLIENGAKVILS 134
Query: 182 THLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVR 361 THLGRPKGVT KF L PLVPRLSELLG +V KADD IG EVE VA+LP+GGVLLLENVR Sbjct: 135 THLGRPKGVTPKFSLAPLVPRLSELLGIEVVKADDCIGPEVETLVASLPEGGVLLLENVR 194
Query: 362 FYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDY 541 FYKEEEKNEP+ AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELDY Sbjct: 195 FYKEEEKNEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDY 254
Query: 542 LDGAVSNPTRPFA 580 L GAVSNP RPFA Sbjct: 255 LVGAVSNPKRPFA 267
>sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2 Length = 433
Score = 320 bits (819), Expect = 4e-87 Identities = 164/193 (84%), Positives = 174/193 (90%) Frame = +2
Query: 2 AKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILT 181 AK+SVGDL ADLKGKKVFVRADLNVPLDDS ITDDTRIRAAIPTIK+L NGAKVIL+ Sbjct: 30 AKKSVGDLTSADLKGKKVFVRADLNVPLDDSQNITDDTRIRAAIPTIKHLINNGAKVILS 89
Query: 182 THLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVR 361 +HLGRPKGVT KF L PLVPRLSELLG +V KADD IG +VEK VA LP+GGVLLLENVR Sbjct: 90 SHLGRPKGVTPKFSLAPLVPRLSELLGLQVVKADDCIGPDVEKLVAELPEGGVLLLENVR 149
Query: 362 FYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDY 541 FYKEEEKN+PE AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELDY Sbjct: 150 FYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDY 209
Query: 542 LDGAVSNPTRPFA 580 L GAVSNP RPFA Sbjct: 210 LVGAVSNPKRPFA 222
>sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1 Length = 401
Score = 315 bits (806), Expect = 1e-85 Identities = 162/192 (84%), Positives = 171/192 (89%) Frame = +2
Query: 5 KRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTT 184 KRSVG L EADLKGKKVFVRADLNVPLDD+ KITDDTRIRA+IPTIKYL E GAKVIL + Sbjct: 4 KRSVGTLGEADLKGKKVFVRADLNVPLDDAQKITDDTRIRASIPTIKYLLEKGAKVILAS 63
Query: 185 HLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRF 364 HLGRPKGVT KF L PLV RLSELLG +V A D IGEEVEK AALPDGGVLLLENVRF Sbjct: 64 HLGRPKGVTPKFSLKPLVARLSELLGLEVVMAPDCIGEEVEKLAAALPDGGVLLLENVRF 123
Query: 365 YKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYL 544 YKEEEKN+PE AKKLASVADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFL+QKELDYL Sbjct: 124 YKEEEKNDPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKELDYL 183
Query: 545 DGAVSNPTRPFA 580 GAV+NP +PFA Sbjct: 184 VGAVANPKKPFA 195
>sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 481
Score = 315 bits (806), Expect = 1e-85 Identities = 160/193 (82%), Positives = 174/193 (90%) Frame = +2
Query: 2 AKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILT 181 AK+SVGDL A+LKGKKVFVRADLNVPLDD+ ITDDTRIRAA+PTIK+L NGAKVIL+ Sbjct: 77 AKKSVGDLTAAELKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLMANGAKVILS 136
Query: 182 THLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVR 361 +HLGRPKGVT K+ L PLVPRLSELLG +V K +D IG EVEK VA+LP+GGVLLLENVR Sbjct: 137 SHLGRPKGVTPKYSLAPLVPRLSELLGIQVVKVEDCIGPEVEKLVASLPEGGVLLLENVR 196
Query: 362 FYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDY 541 FYKEEEKNEPE AKKLAS+ADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELDY Sbjct: 197 FYKEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDY 256
Query: 542 LDGAVSNPTRPFA 580 L GAVSNP RPFA Sbjct: 257 LVGAVSNPKRPFA 269
>sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1 Length = 480
Score = 313 bits (801), Expect = 5e-85 Identities = 160/193 (82%), Positives = 173/193 (89%) Frame = +2
Query: 2 AKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILT 181 AK+SVGDL ADL+GK+V VRADLNVPLDD+ ITDDTRIRAAIPTIKYL NGAKVILT Sbjct: 74 AKKSVGDLTAADLEGKRVLVRADLNVPLDDNQNITDDTRIRAAIPTIKYLLSNGAKVILT 133
Query: 182 THLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVR 361 +HLGRPKGVT KF L PLVPRLSELLG +V+KA+D IG EVEK VA L +G VLLLENVR Sbjct: 134 SHLGRPKGVTPKFSLAPLVPRLSELLGIEVKKAEDVIGPEVEKLVADLANGAVLLLENVR 193
Query: 362 FYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDY 541 FYKEEEKN+PE AKKLAS+ADL+VNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELDY Sbjct: 194 FYKEEEKNDPEFAKKLASLADLFVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDY 253
Query: 542 LDGAVSNPTRPFA 580 LDGAVSNP RPFA Sbjct: 254 LDGAVSNPKRPFA 266
>sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1 Length = 401
Score = 306 bits (784), Expect = 5e-83 Identities = 152/192 (79%), Positives = 172/192 (89%) Frame = +2
Query: 5 KRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILTT 184 K+SVG LKEADLKGK+VFVR DLNVPLD++ ITDDTRIRAA+PTIKYL ++G+ VIL + Sbjct: 4 KKSVGSLKEADLKGKRVFVRVDLNVPLDENFNITDDTRIRAAVPTIKYLMQHGSHVILAS 63
Query: 185 HLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVRF 364 HLGRPKGVT K+ L PLVPRLSELLG +V+ A+DSIG EVEK VA +P+GGVLLLENVRF Sbjct: 64 HLGRPKGVTPKYSLKPLVPRLSELLGVEVKIANDSIGPEVEKLVAEIPEGGVLLLENVRF 123
Query: 365 YKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDYL 544 YKEEEKNEPE AKKLAS+ADLYVNDAFGTAHRAHASTEGV KYL P+VAGFL+QKELDYL Sbjct: 124 YKEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPAVAGFLMQKELDYL 183
Query: 545 DGAVSNPTRPFA 580 GAV+NP +PFA Sbjct: 184 VGAVANPQKPFA 195
>sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1 Length = 461
Score = 291 bits (744), Expect = 2e-78 Identities = 151/193 (78%), Positives = 168/193 (87%), Gaps = 2/193 (1%) Frame = +2
Query: 5 KRSVGDLKEADLKGKKVFVRADLNVPLDDS-LKITDDTRIRAAIPTIKYLTENGAKVILT 181 K+SVGDL +ADL+GK+VFVRADLNVPLD + L ITDDTRIRAA+PT+KYL +NGAKV+LT Sbjct: 62 KKSVGDLHKADLEGKRVFVRADLNVPLDKATLAITDDTRIRAAVPTLKYLLDNGAKVLLT 121
Query: 182 THLGRPKGVTE-KFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENV 358 +HLGRPKG E K+RL P+V RLSELLG V K DD IG EVEK V A+ +G +LLLEN Sbjct: 122 SHLGRPKGGPEDKYRLTPVVARLSELLGKPVTKVDDCIGPEVEKAVGAMKNGELLLLENC 181
Query: 359 RFYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELD 538 RFYKEEEKNEPE AKKLA+ ADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELD Sbjct: 182 RFYKEEEKNEPEFAKKLAANADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELD 241
Query: 539 YLDGAVSNPTRPF 577 YLDGAVSNP RPF Sbjct: 242 YLDGAVSNPKRPF 254
>sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1 Length = 462
Score = 288 bits (737), Expect = 1e-77 Identities = 150/193 (77%), Positives = 169/193 (87%), Gaps = 2/193 (1%) Frame = +2
Query: 5 KRSVGDLKEADLKGKKVFVRADLNVPLDD-SLKITDDTRIRAAIPTIKYLTENGAKVILT 181 K+SVGDL +ADL+GK+VFVRADLNVPLD +L ITDDTRIRAA+PT+KYL +NGAKV+LT Sbjct: 63 KKSVGDLGKADLEGKRVFVRADLNVPLDKKTLAITDDTRIRAAVPTLKYLLDNGAKVLLT 122
Query: 182 THLGRPKGVTE-KFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENV 358 +HLGRPKG E K+RL P+V RLSELLG +V+K DD IG VE+ VA+L G +LLLENV Sbjct: 123 SHLGRPKGGPEDKYRLTPVVARLSELLGKEVKKVDDCIGPSVEQAVASLKSGELLLLENV 182
Query: 359 RFYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELD 538 RFYKEEEKN+PE AKKLAS ADLYVNDAFGTAHRAHASTEGVTK+L PSVAGFLLQKELD Sbjct: 183 RFYKEEEKNDPEFAKKLASNADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELD 242
Query: 539 YLDGAVSNPTRPF 577 YLDGAVS P RPF Sbjct: 243 YLDGAVSAPKRPF 255
>sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1 Length = 400
Score = 270 bits (691), Expect = 3e-72 Identities = 136/193 (70%), Positives = 156/193 (80%) Frame = +2
Query: 2 AKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILT 181 +K++V L AD+ GK+ VR D NVPLDD ITDDTRIRAA+PTI+ LT+ GAKVIL Sbjct: 2 SKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILA 61
Query: 182 THLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVR 361 +H GRPKGV EK RL P+ RLSELLG +V K DDSIG+EV KVAAL +G VLLLENVR Sbjct: 62 SHFGRPKGVDEKLRLTPVAKRLSELLGQEVVKTDDSIGDEVAAKVAALQNGQVLLLENVR 121
Query: 362 FYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDY 541 FYKEEEKN+PE AKKLA+ AD YVNDAFGTAHRAHASTEGVTK+LSPSVAG+L++KEL Y Sbjct: 122 FYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQY 181
Query: 542 LDGAVSNPTRPFA 580 L A+ NP RP A Sbjct: 182 LQSAIENPQRPLA 194
>sp|Q8YPR1|PGK_ANASP Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1 Length = 400
Score = 268 bits (686), Expect = 1e-71 Identities = 135/193 (69%), Positives = 155/193 (80%) Frame = +2
Query: 2 AKRSVGDLKEADLKGKKVFVRADLNVPLDDSLKITDDTRIRAAIPTIKYLTENGAKVILT 181 +K++V L AD+ GK+ VR D NVPLDD ITDDTRIRAA+PTI+ LT+ GAKVIL Sbjct: 2 SKKTVASLSAADISGKRALVRVDFNVPLDDQGNITDDTRIRAALPTIQDLTQKGAKVILA 61
Query: 182 THLGRPKGVTEKFRLNPLVPRLSELLGFKVEKADDSIGEEVEKKVAALPDGGVLLLENVR 361 +H GRPKGV EK RL P+ RLSELLG +V K DDSIG+EV KVA L +G VLLLENVR Sbjct: 62 SHFGRPKGVDEKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENVR 121
Query: 362 FYKEEEKNEPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLSPSVAGFLLQKELDY 541 FYKEEEKN+PE AKKLA+ AD YVNDAFGTAHRAHASTEGVTK+LSPSVAG+L++KEL Y Sbjct: 122 FYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQY 181
Query: 542 LDGAVSNPTRPFA 580 L A+ NP RP A Sbjct: 182 LQSAIENPQRPLA 194
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LD57 |
Definition |
tr|Q9LD57|Q9LD57_ARATH Phosphoglycerate kinase OS=Arabidopsis thaliana |
Align length |
193 |
Score (bit) |
324.0 |
E-value |
3.0e-87 |
Report |
|