DK952930
Clone id TST38A01NGRL0015_G21
Library
Length 568
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0015_G21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
ACCCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAATGGCAGCCGTGTGAGC
GCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCG
CCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACC
CCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGCGGC
TACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCAAGATGCC
GCTGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCGC
GTGCTGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCC
TCTGTCTAAACTTTCTTAAAGCAAGCCAATTTAGTTGGCATGAATGCCTGCTTCCCATTT
CCCACTGGCGCCTAACAAGCTTGCTCTTATGAGCTTTTGTGTCCCAGCCACTTTGCATAC
ATAATGAAACAACTTCCCAGTGGTGGCT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 128
Score (bit) 181.0
E-value 2.0e-45
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952930|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_G21, 5'
(568 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 181 2e-45
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 181 3e-45
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 180 4e-45
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 178 2e-44
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 178 2e-44
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 178 2e-44
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 177 3e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 177 4e-44
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 177 4e-44
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 176 6e-44
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 176 6e-44
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 176 9e-44
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 175 1e-43
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 175 1e-43
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 175 2e-43
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 175 2e-43
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 175 2e-43
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 175 2e-43
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 174 2e-43
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 174 2e-43
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 174 4e-43
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 174 4e-43
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 174 4e-43
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 174 4e-43
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai... 173 6e-43
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 173 6e-43
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 173 6e-43
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 172 1e-42
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha... 171 2e-42
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 171 2e-42

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 181 bits (460), Expect = 2e-45
Identities = 80/128 (62%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Frame = +1

Query: 40 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 216
SNG RV M VW P KK+ETLSYLPPLS E ++K++D+++R W PC+EF+ + G VY
Sbjct: 50 SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVY 109

Query: 217 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 396
REH H GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD RQVQ
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQC 169

Query: 397 SGFLVQKP 420
F+V KP
Sbjct: 170 ISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182

Score = 181 bits (458), Expect = 3e-45
Identities = 82/128 (64%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Frame = +1

Query: 40 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 216
SNG RV M VW P KKFETLSYLPPLSSEQ+AK+VD+++RK PC+EF+ + G VY
Sbjct: 52 SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111

Query: 217 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 396
REH GYYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+
Sbjct: 112 REHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQI 171

Query: 397 SGFLVQKP 420
F+ KP
Sbjct: 172 ISFIAYKP 179


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 180 bits (457), Expect = 4e-45
Identities = 82/138 (59%), Positives = 100/138 (72%)
Frame = +1

Query: 7 FAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPC 186
FA S P SNG RV M VW P KKFETLSYLPPL+ EQ+ ++VD+++R GW PC
Sbjct: 41 FADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPC 97

Query: 187 IEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVL 366
IEF K+G VYRE+ + GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++
Sbjct: 98 IEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRII 157

Query: 367 GFDAKRQVQVSGFLVQKP 420
GFD RQVQ FL KP
Sbjct: 158 GFDNTRQVQCISFLTYKP 175


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 178 bits (451), Expect = 2e-44
Identities = 80/128 (62%), Positives = 94/128 (73%)
Frame = +1

Query: 40 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 219
SNG RVS M VW P KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYR
Sbjct: 50 SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 220 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 399
E+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 400 GFLVQKPS 423
F+ KP+
Sbjct: 170 SFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 178 bits (451), Expect = 2e-44
Identities = 80/128 (62%), Positives = 94/128 (73%)
Frame = +1

Query: 40 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 219
SNG RVS M VW P KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYR
Sbjct: 50 SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 220 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 399
E+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 400 GFLVQKPS 423
F+ KP+
Sbjct: 170 SFIAYKPT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
Length = 177

Score = 178 bits (451), Expect = 2e-44
Identities = 80/128 (62%), Positives = 94/128 (73%)
Frame = +1

Query: 40 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 219
SNG RVS M VW P KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYR
Sbjct: 50 SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 220 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 399
E+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 400 GFLVQKPS 423
F+ KP+
Sbjct: 170 SFIAYKPT 177


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
Length = 180

Score = 177 bits (449), Expect = 3e-44
Identities = 81/130 (62%), Positives = 101/130 (77%), Gaps = 1/130 (0%)
Frame = +1

Query: 40 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 219
+NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++++ GW PCIEFD G+V R
Sbjct: 51 TNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTR 110

Query: 220 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEY-PEAFIRVLGFDAKRQVQV 396
E GYYDGRYW MWKLPMFGC D+A+VLREI EC K Y + +IR LGFD RQVQ
Sbjct: 111 EGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQC 170

Query: 397 SGFLVQKPSV 426
+ F+V +P++
Sbjct: 171 ASFIVHQPTL 180


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
Length = 189

Score = 177 bits (448), Expect = 4e-44
Identities = 78/127 (61%), Positives = 97/127 (76%)
Frame = +1

Query: 40 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 219
SNGSRV M VW PY NKKFETLSYLP L+ EQ+ K+V+++++ W PC+EF++ G + R
Sbjct: 60 SNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKR 119

Query: 220 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 399
+ + GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP AFIRV+GFD RQVQ
Sbjct: 120 VYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCI 179

Query: 400 GFLVQKP 420
F+V KP
Sbjct: 180 SFIVHKP 186


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
Length = 177

Score = 177 bits (448), Expect = 4e-44
Identities = 79/128 (61%), Positives = 94/128 (73%)
Frame = +1

Query: 40 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 219
SNG +VS M VW P KKFETLSYLPPLS E +AK+VD+++R W PCIEF K G VYR
Sbjct: 50 SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYR 109

Query: 220 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 399
E+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E K YPE F+R++GFD KRQVQ
Sbjct: 110 ENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCI 169

Query: 400 GFLVQKPS 423
F+ KP+
Sbjct: 170 SFIAYKPT 177


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
Length = 171

Score = 176 bits (447), Expect = 6e-44
Identities = 77/127 (60%), Positives = 96/127 (75%)
Frame = +1

Query: 40 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 219
SNG RV M VW P+ N KFETLSYLP L+ EQ+ K+V++++R W PC+EFD GS+ R
Sbjct: 44 SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103

Query: 220 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 399
++ GYYDGRYWVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD RQVQ
Sbjct: 104 KYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCI 163

Query: 400 GFLVQKP 420
F+V KP
Sbjct: 164 SFIVHKP 170


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 141
Score (bit) 271.0
E-value 2.0e-71
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952930|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0015_G21, 5'
(568 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 271 2e-71
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 190 5e-47
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 188 2e-46
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 187 3e-46
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 187 3e-46
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 187 5e-46
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 185 2e-45
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 184 4e-45
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 182 9e-45
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 181 3e-44
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c... 180 4e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 179 7e-44
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c... 179 7e-44
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 178 2e-43
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 178 2e-43
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 178 2e-43
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c... 177 3e-43
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza... 177 3e-43
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 177 3e-43
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c... 177 3e-43
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 176 6e-43
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 176 6e-43
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c... 176 8e-43
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c... 176 8e-43
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c... 176 8e-43
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c... 176 8e-43
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c... 176 1e-42
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 176 1e-42
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c... 175 1e-42
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c... 175 1e-42

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 271 bits (693), Expect = 2e-71
Identities = 124/141 (87%), Positives = 135/141 (95%)
Frame = +1

Query: 1 TLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWT 180
TLFAPK NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAKQV++MVRKGWT
Sbjct: 33 TLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWT 92

Query: 181 PCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIR 360
PCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAECAKEYP AFIR
Sbjct: 93 PCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIR 152

Query: 361 VLGFDAKRQVQVSGFLVQKPS 423
VLGFDAKRQVQV+GFLV+KPS
Sbjct: 153 VLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 190 bits (482), Expect = 5e-47
Identities = 88/144 (61%), Positives = 108/144 (75%), Gaps = 3/144 (2%)
Frame = +1

Query: 1 TLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWT 180
TLFA K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQVDFM+++
Sbjct: 36 TLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLI 95

Query: 181 PCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEA 351
PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P
Sbjct: 96 PCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSC 155

Query: 352 FIRVLGFDAKRQVQVSGFLVQKPS 423
++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 156 WVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 188 bits (478), Expect = 2e-46
Identities = 86/144 (59%), Positives = 108/144 (75%), Gaps = 3/144 (2%)
Frame = +1

Query: 1 TLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWT 180
TLF+ K+ A+ NGSRV M VW P KFET SYLPPL+ +QIAKQVD+M+++
Sbjct: 41 TLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLI 100

Query: 181 PCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEA 351
PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI EC ++P
Sbjct: 101 PCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSC 160

Query: 352 FIRVLGFDAKRQVQVSGFLVQKPS 423
++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 161 WVRVLGFDSKKQVQICGFLVSRPN 184


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 187 bits (476), Expect = 3e-46
Identities = 85/144 (59%), Positives = 108/144 (75%), Gaps = 3/144 (2%)
Frame = +1

Query: 1 TLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWT 180
TLF+ K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQVD+M+++
Sbjct: 71 TLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLI 130

Query: 181 PCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEA 351
PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI EC ++P
Sbjct: 131 PCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSC 190

Query: 352 FIRVLGFDAKRQVQVSGFLVQKPS 423
++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 191 WVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 187 bits (476), Expect = 3e-46
Identities = 86/144 (59%), Positives = 106/144 (73%), Gaps = 3/144 (2%)
Frame = +1

Query: 1 TLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWT 180
TLF KS ++ NGSRV M VW P KFET SYLPPLS +QIA+QVD+M+++
Sbjct: 41 TLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLI 100

Query: 181 PCIEFDKIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEA 351
PCIEFD +G+V R +F GSG YYDGRYW MWKLPMFGC D++ VLREI EC YP
Sbjct: 101 PCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSC 160

Query: 352 FIRVLGFDAKRQVQVSGFLVQKPS 423
++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 161 WVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 187 bits (474), Expect = 5e-46
Identities = 87/144 (60%), Positives = 107/144 (74%), Gaps = 3/144 (2%)
Frame = +1

Query: 1 TLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWT 180
TL A K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQVDFM+++
Sbjct: 36 TLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLI 95

Query: 181 PCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEA 351
PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI EC + +P
Sbjct: 96 PCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSC 155

Query: 352 FIRVLGFDAKRQVQVSGFLVQKPS 423
++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 156 WVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 185 bits (469), Expect = 2e-45
Identities = 83/144 (57%), Positives = 108/144 (75%), Gaps = 3/144 (2%)
Frame = +1

Query: 1 TLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWT 180
TLF+ ++ ++ NGSRV M VW P KFET SYLPPL+ ++IAKQVD+M+++
Sbjct: 40 TLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLI 99

Query: 181 PCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEA 351
PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI EC ++P
Sbjct: 100 PCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSC 159

Query: 352 FIRVLGFDAKRQVQVSGFLVQKPS 423
++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 160 WVRVLGFDSKKQVQICGFLVSRPN 183


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
chain OS=Lactuca sativa PE=2 SV=1
Length = 181

Score = 184 bits (466), Expect = 4e-45
Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Frame = +1

Query: 40 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 216
SNG RV M VW P KK+ETLSYLPPLS E ++K++D+++R W PC+EF+ + G VY
Sbjct: 50 SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVY 109

Query: 217 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 396
REH H GYYDGRYW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ
Sbjct: 110 REHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQC 169

Query: 397 SGFLVQKP 420
F+V KP
Sbjct: 170 ISFIVSKP 177


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
chain OS=Populus trichocarpa PE=2 SV=1
Length = 170

Score = 182 bits (463), Expect = 9e-45
Identities = 78/128 (60%), Positives = 97/128 (75%)
Frame = +1

Query: 37 ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 216
+SNGS+ M W P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV
Sbjct: 41 VSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVR 100

Query: 217 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 396
REH GYYDGRYW +WKLPMFGC D++ VL EI EC K YP+A+IR L FD K Q Q
Sbjct: 101 REHSRMPGYYDGRYWTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQC 160

Query: 397 SGFLVQKP 420
F++QKP
Sbjct: 161 MAFVIQKP 168


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
chain OS=Ammopiptanthus mongolicus PE=2 SV=1
Length = 174

Score = 181 bits (459), Expect = 3e-44
Identities = 79/128 (61%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Frame = +1

Query: 40 SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 216
+NG RV MLVW P KKFETLSYLPPLS E + K+V++++RKGW PC+EF+ + G VY
Sbjct: 42 NNGGRVQCMLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEFELEHGFVY 101

Query: 217 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 396
RE+ GYYDGRYW MWKLPMFGC DA+ V++E+ EC KEYP AF+R++GFD KRQVQ
Sbjct: 102 RENNRSPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQVQC 161

Query: 397 SGFLVQKP 420
F+ KP
Sbjct: 162 ISFIAYKP 169